EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000001575 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1366 bases
Position: chr13:3890533-3891898
Accession: 103388147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000002349	RRM_1	PF00076.22	5.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000002389	-	1063	XM_008323026	ENSCSEP00000002349	345 (aa)	XP_008321248	-

Gene Model

Click here to download ENSCSEG00000001575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000001575	-	99	30.541	ENSCSEG00000004610	rbm12b	69	30.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001575	-	99	51.862	ENSAPOG00000008836	zgc:153215	76	51.862	Acanthochromis_polyacanthus
ENSCSEG00000001575	-	98	48.187	ENSACIG00000013317	zgc:153215	79	48.187	Amphilophus_citrinellus
ENSCSEG00000001575	-	97	31.077	ENSACIG00000014943	rbm12b	98	31.077	Amphilophus_citrinellus
ENSCSEG00000001575	-	91	30.952	ENSAOCG00000024270	rbm12b	51	30.952	Amphiprion_ocellaris
ENSCSEG00000001575	-	99	48.684	ENSAOCG00000010819	zgc:153215	76	51.053	Amphiprion_ocellaris
ENSCSEG00000001575	-	87	30.435	ENSAPEG00000022079	rbm12b	99	30.938	Amphiprion_percula
ENSCSEG00000001575	-	99	72.603	ENSATEG00000001886	zgc:153215	82	72.603	Anabas_testudineus
ENSCSEG00000001575	-	99	30.220	ENSATEG00000004578	rbm12b	54	30.220	Anabas_testudineus
ENSCSEG00000001575	-	99	31.667	ENSACLG00000005578	rbm12b	59	31.667	Astatotilapia_calliptera
ENSCSEG00000001575	-	99	47.761	ENSACLG00000007675	zgc:153215	80	47.761	Astatotilapia_calliptera
ENSCSEG00000001575	-	99	56.579	ENSAMXG00000020853	zgc:153215	69	56.579	Astyanax_mexicanus
ENSCSEG00000001575	-	99	36.464	ENSCVAG00000009259	-	99	36.464	Cyprinodon_variegatus
ENSCSEG00000001575	-	88	63.158	ENSDARG00000055889	zgc:153215	58	63.158	Danio_rerio
ENSCSEG00000001575	-	100	38.149	ENSELUG00000009039	zgc:153215	76	38.149	Esox_lucius
ENSCSEG00000001575	-	99	46.647	ENSFHEG00000014539	zgc:153215	71	46.647	Fundulus_heteroclitus
ENSCSEG00000001575	-	99	32.698	ENSGMOG00000013467	rbm12b	73	32.698	Gadus_morhua
ENSCSEG00000001575	-	99	44.750	ENSGAFG00000007845	zgc:153215	81	44.750	Gambusia_affinis
ENSCSEG00000001575	-	99	30.769	ENSGAFG00000007224	rbm12b	73	30.387	Gambusia_affinis
ENSCSEG00000001575	-	91	31.118	ENSGACG00000008682	rbm12b	50	31.118	Gasterosteus_aculeatus
ENSCSEG00000001575	-	99	41.972	ENSHBUG00000016150	zgc:153215	76	41.972	Haplochromis_burtoni
ENSCSEG00000001575	-	100	56.000	ENSIPUG00000019731	zgc:153215	76	56.000	Ictalurus_punctatus
ENSCSEG00000001575	-	99	50.000	ENSKMAG00000004958	zgc:153215	91	50.000	Kryptolebias_marmoratus
ENSCSEG00000001575	-	99	50.914	ENSLBEG00000002597	zgc:153215	77	50.914	Labrus_bergylta
ENSCSEG00000001575	-	99	30.769	ENSLOCG00000018344	rbm12b	56	30.691	Lepisosteus_oculatus
ENSCSEG00000001575	-	92	32.840	ENSMAMG00000011998	rbm12b	51	32.840	Mastacembelus_armatus
ENSCSEG00000001575	-	99	60.000	ENSMAMG00000012038	zgc:153215	67	60.000	Mastacembelus_armatus
ENSCSEG00000001575	-	91	31.532	ENSMZEG00005015005	rbm12b	50	31.532	Maylandia_zebra
ENSCSEG00000001575	-	99	41.972	ENSMZEG00005005435	zgc:153215	76	41.972	Maylandia_zebra
ENSCSEG00000001575	-	99	39.237	ENSMMOG00000003372	zgc:153215	98	39.237	Mola_mola
ENSCSEG00000001575	-	99	49.867	ENSMALG00000001222	zgc:153215	78	49.867	Monopterus_albus
ENSCSEG00000001575	-	91	30.931	ENSNBRG00000015057	rbm12b	50	30.931	Neolamprologus_brichardi
ENSCSEG00000001575	-	99	41.972	ENSNBRG00000013644	zgc:153215	76	41.972	Neolamprologus_brichardi
ENSCSEG00000001575	-	99	47.666	ENSONIG00000006054	zgc:153215	78	47.666	Oreochromis_niloticus
ENSCSEG00000001575	-	91	31.532	ENSONIG00000020612	rbm12b	50	31.532	Oreochromis_niloticus
ENSCSEG00000001575	-	98	31.445	ENSORLG00000008228	rbm12b	52	31.445	Oryzias_latipes
ENSCSEG00000001575	-	98	31.445	ENSORLG00020013619	rbm12b	52	31.445	Oryzias_latipes_hni
ENSCSEG00000001575	-	98	31.445	ENSORLG00015019999	rbm12b	52	31.445	Oryzias_latipes_hsok
ENSCSEG00000001575	-	99	48.256	ENSOMEG00000004220	zgc:153215	71	48.256	Oryzias_melastigma
ENSCSEG00000001575	-	99	30.055	ENSOMEG00000022523	rbm12b	53	30.055	Oryzias_melastigma
ENSCSEG00000001575	-	99	32.500	ENSPKIG00000014851	zgc:153215	77	32.500	Paramormyrops_kingsleyae
ENSCSEG00000001575	-	99	31.266	ENSPKIG00000018719	rbm12b	56	31.266	Paramormyrops_kingsleyae
ENSCSEG00000001575	-	86	30.530	ENSPMGG00000012348	-	94	30.530	Periophthalmus_magnuspinnatus
ENSCSEG00000001575	-	99	30.220	ENSPFOG00000020937	rbm12b	70	30.939	Poecilia_formosa
ENSCSEG00000001575	-	99	50.857	ENSPLAG00000000232	zgc:153215	80	50.857	Poecilia_latipinna
ENSCSEG00000001575	-	99	30.495	ENSPLAG00000018782	rbm12b	73	31.215	Poecilia_latipinna
ENSCSEG00000001575	-	99	50.575	ENSPMEG00000016662	zgc:153215	79	50.575	Poecilia_mexicana
ENSCSEG00000001575	-	99	30.495	ENSPMEG00000011418	rbm12b	73	30.110	Poecilia_mexicana
ENSCSEG00000001575	-	99	30.220	ENSPREG00000020770	rbm12b	73	30.939	Poecilia_reticulata
ENSCSEG00000001575	-	98	47.258	ENSPREG00000018608	zgc:153215	80	47.258	Poecilia_reticulata
ENSCSEG00000001575	-	99	50.581	ENSPNYG00000018125	zgc:153215	70	50.581	Pundamilia_nyererei
ENSCSEG00000001575	-	91	31.250	ENSPNYG00000016696	rbm12b	50	31.250	Pundamilia_nyererei
ENSCSEG00000001575	-	88	59.211	ENSPNAG00000025628	zgc:153215	71	59.211	Pygocentrus_nattereri
ENSCSEG00000001575	-	99	36.616	ENSSFOG00015009427	zgc:153215	77	36.616	Scleropages_formosus
ENSCSEG00000001575	-	99	31.138	ENSSMAG00000019708	rbm12b	73	31.138	Scophthalmus_maximus
ENSCSEG00000001575	-	99	54.054	ENSSMAG00000019013	zgc:153215	74	54.054	Scophthalmus_maximus
ENSCSEG00000001575	-	99	31.065	ENSSDUG00000006856	rbm12b	73	31.065	Seriola_dumerili
ENSCSEG00000001575	-	99	54.111	ENSSDUG00000012545	zgc:153215	76	54.907	Seriola_dumerili
ENSCSEG00000001575	-	99	30.769	ENSSLDG00000016156	rbm12b	73	30.769	Seriola_lalandi_dorsalis
ENSCSEG00000001575	-	99	70.270	ENSSLDG00000013581	zgc:153215	60	70.270	Seriola_lalandi_dorsalis
ENSCSEG00000001575	-	98	50.146	ENSSPAG00000023584	zgc:153215	69	50.437	Stegastes_partitus
ENSCSEG00000001575	-	91	30.294	ENSTRUG00000013738	rbm12b	51	30.294	Takifugu_rubripes
ENSCSEG00000001575	-	99	43.909	ENSTNIG00000018374	-	99	44.643	Tetraodon_nigroviridis
ENSCSEG00000001575	-	99	30.347	ENSXETG00000014694	rbm12b	74	30.347	Xenopus_tropicalis
ENSCSEG00000001575	-	99	45.663	ENSXCOG00000019654	zgc:153215	79	45.663	Xiphophorus_couchianus
ENSCSEG00000001575	-	57	35.484	ENSXCOG00000019735	-	73	35.484	Xiphophorus_couchianus
ENSCSEG00000001575	-	87	46.154	ENSXMAG00000013169	-	75	46.154	Xiphophorus_maculatus
ENSCSEG00000001575	-	99	31.319	ENSXMAG00000014213	rbm12b	73	30.663	Xiphophorus_maculatus