EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000001601 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 9514 bases
Position: chr13:3935626-3945139
Accession: 103388160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000002384	ResIII	PF04851.15	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000002424	-	2502	XM_017037646	ENSCSEP00000002384	833 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000001601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000001601	rad54b	67	47.100	ENSCSEG00000001983	rad54l	77	46.573

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001601	rad54b	99	57.002	ENSG00000197275	RAD54B	95	57.002	Homo_sapiens
ENSCSEG00000001601	rad54b	85	57.123	ENSG00000265817	FSBP	99	57.123	Homo_sapiens
ENSCSEG00000001601	rad54b	93	58.638	ENSAMEG00000005834	-	86	58.638	Ailuropoda_melanoleuca
ENSCSEG00000001601	rad54b	99	79.566	ENSACIG00000013005	rad54b	99	79.566	Amphilophus_citrinellus
ENSCSEG00000001601	rad54b	99	75.108	ENSAOCG00000008523	rad54b	99	75.216	Amphiprion_ocellaris
ENSCSEG00000001601	rad54b	99	76.223	ENSAPEG00000001673	rad54b	99	76.397	Amphiprion_percula
ENSCSEG00000001601	rad54b	99	85.894	ENSATEG00000001527	rad54b	99	82.407	Anabas_testudineus
ENSCSEG00000001601	rad54b	98	77.778	ENSAPLG00000014366	-	91	77.778	Anas_platyrhynchos
ENSCSEG00000001601	rad54b	93	58.438	ENSACAG00000003671	-	98	58.438	Anolis_carolinensis
ENSCSEG00000001601	rad54b	75	59.813	ENSANAG00000019528	-	99	59.906	Aotus_nancymaae
ENSCSEG00000001601	rad54b	99	80.863	ENSACLG00000007826	rad54b	99	80.863	Astatotilapia_calliptera
ENSCSEG00000001601	rad54b	92	66.922	ENSAMXG00000039985	rad54b	94	66.582	Astyanax_mexicanus
ENSCSEG00000001601	rad54b	93	59.068	ENSBTAG00000000632	RAD54B	86	59.068	Bos_taurus
ENSCSEG00000001601	rad54b	84	34.409	WBGene00013792	Y116A8C.13	82	34.312	Caenorhabditis_elegans
ENSCSEG00000001601	rad54b	97	61.538	ENSCJAG00000000080	-	99	57.793	Callithrix_jacchus
ENSCSEG00000001601	rad54b	93	58.764	ENSCAFG00000009179	RAD54B	86	58.764	Canis_familiaris
ENSCSEG00000001601	rad54b	93	58.890	ENSCAFG00020012084	-	86	58.890	Canis_lupus_dingo
ENSCSEG00000001601	rad54b	93	58.942	ENSCHIG00000008230	-	86	58.965	Capra_hircus
ENSCSEG00000001601	rad54b	97	59.391	ENSTSYG00000013234	-	86	59.391	Carlito_syrichta
ENSCSEG00000001601	rad54b	96	57.213	ENSCPOG00000011643	-	89	57.213	Cavia_porcellus
ENSCSEG00000001601	rad54b	99	58.786	ENSCCAG00000011754	-	99	57.750	Cebus_capucinus
ENSCSEG00000001601	rad54b	99	61.538	ENSCATG00000030661	-	99	57.418	Cercocebus_atys
ENSCSEG00000001601	rad54b	99	54.893	ENSCLAG00000010476	-	99	54.893	Chinchilla_lanigera
ENSCSEG00000001601	rad54b	95	57.230	ENSCSAG00000012712	-	93	61.538	Chlorocebus_sabaeus
ENSCSEG00000001601	rad54b	99	61.392	ENSCPBG00000003204	-	91	63.085	Chrysemys_picta_bellii
ENSCSEG00000001601	rad54b	99	61.538	ENSCANG00000017939	-	99	57.692	Colobus_angolensis_palliatus
ENSCSEG00000001601	rad54b	99	55.329	ENSCGRG00001020184	Rad54b	99	55.329	Cricetulus_griseus_chok1gshd
ENSCSEG00000001601	rad54b	99	53.993	ENSCGRG00000016752	Rad54b	99	53.993	Cricetulus_griseus_crigri
ENSCSEG00000001601	rad54b	99	77.408	ENSCVAG00000009200	rad54b	99	77.408	Cyprinodon_variegatus
ENSCSEG00000001601	rad54b	99	62.887	ENSDARG00000092134	rad54b	99	67.344	Danio_rerio
ENSCSEG00000001601	rad54b	98	58.668	ENSDNOG00000015535	-	86	58.668	Dasypus_novemcinctus
ENSCSEG00000001601	rad54b	99	56.236	ENSDORG00000002492	Rad54b	99	56.144	Dipodomys_ordii
ENSCSEG00000001601	rad54b	87	61.505	ENSETEG00000010605	-	92	61.538	Echinops_telfairi
ENSCSEG00000001601	rad54b	93	51.256	ENSEBUG00000009104	rad54b	84	51.256	Eptatretus_burgeri
ENSCSEG00000001601	rad54b	93	57.358	ENSEASG00005004021	-	89	57.358	Equus_asinus_asinus
ENSCSEG00000001601	rad54b	93	57.736	ENSECAG00000021949	-	89	61.538	Equus_caballus
ENSCSEG00000001601	rad54b	77	49.000	ENSEEUG00000008056	-	72	49.000	Erinaceus_europaeus
ENSCSEG00000001601	rad54b	99	74.328	ENSELUG00000009287	rad54b	93	74.328	Esox_lucius
ENSCSEG00000001601	rad54b	93	58.595	ENSFCAG00000015513	-	99	58.095	Felis_catus
ENSCSEG00000001601	rad54b	98	87.500	ENSFALG00000005467	-	88	60.345	Ficedula_albicollis
ENSCSEG00000001601	rad54b	95	57.248	ENSFDAG00000020541	-	91	73.333	Fukomys_damarensis
ENSCSEG00000001601	rad54b	93	78.689	ENSFHEG00000014382	rad54b	87	78.689	Fundulus_heteroclitus
ENSCSEG00000001601	rad54b	93	78.914	ENSGMOG00000014774	rad54b	98	78.914	Gadus_morhua
ENSCSEG00000001601	rad54b	98	77.778	ENSGALG00000043597	RAD54B	91	77.778	Gallus_gallus
ENSCSEG00000001601	rad54b	99	81.156	ENSGAFG00000007901	rad54b	99	80.165	Gambusia_affinis
ENSCSEG00000001601	rad54b	99	78.349	ENSGACG00000009128	rad54b	95	78.349	Gasterosteus_aculeatus
ENSCSEG00000001601	rad54b	99	61.006	ENSGAGG00000018747	-	92	61.083	Gopherus_agassizii
ENSCSEG00000001601	rad54b	95	57.125	ENSGGOG00000023516	-	92	57.125	Gorilla_gorilla
ENSCSEG00000001601	rad54b	99	74.624	ENSHBUG00000016017	rad54b	99	74.784	Haplochromis_burtoni
ENSCSEG00000001601	rad54b	95	56.485	ENSHGLG00000008263	RAD54B	88	56.485	Heterocephalus_glaber_female
ENSCSEG00000001601	rad54b	95	55.836	ENSHGLG00100008108	-	88	55.836	Heterocephalus_glaber_male
ENSCSEG00000001601	rad54b	99	72.210	ENSHCOG00000004764	rad54b	100	71.711	Hippocampus_comes
ENSCSEG00000001601	rad54b	94	65.675	ENSIPUG00000018531	rad54b	85	65.675	Ictalurus_punctatus
ENSCSEG00000001601	rad54b	99	53.032	ENSSTOG00000010791	-	99	53.032	Ictidomys_tridecemlineatus
ENSCSEG00000001601	rad54b	99	53.135	ENSJJAG00000010314	Rad54b	99	53.135	Jaculus_jaculus
ENSCSEG00000001601	rad54b	99	75.527	ENSKMAG00000004744	rad54b	99	75.527	Kryptolebias_marmoratus
ENSCSEG00000001601	rad54b	88	61.917	ENSLACG00000000859	-	100	61.917	Latimeria_chalumnae
ENSCSEG00000001601	rad54b	99	65.973	ENSLOCG00000010100	rad54b	98	65.316	Lepisosteus_oculatus
ENSCSEG00000001601	rad54b	92	57.089	ENSLAFG00000015315	-	97	57.089	Loxodonta_africana
ENSCSEG00000001601	rad54b	99	61.538	ENSMFAG00000031629	-	99	57.418	Macaca_fascicularis
ENSCSEG00000001601	rad54b	99	61.538	ENSMMUG00000005659	-	93	61.538	Macaca_mulatta
ENSCSEG00000001601	rad54b	99	61.538	ENSMNEG00000016408	-	93	61.538	Macaca_nemestrina
ENSCSEG00000001601	rad54b	99	75.000	ENSMLEG00000006946	-	91	75.000	Mandrillus_leucophaeus
ENSCSEG00000001601	rad54b	99	79.224	ENSMAMG00000012269	rad54b	99	79.224	Mastacembelus_armatus
ENSCSEG00000001601	rad54b	99	80.432	ENSMZEG00005005281	rad54b	98	80.626	Maylandia_zebra
ENSCSEG00000001601	rad54b	95	59.804	ENSMGAG00000012024	-	88	59.804	Meleagris_gallopavo
ENSCSEG00000001601	rad54b	99	54.751	ENSMAUG00000013586	Rad54b	99	54.751	Mesocricetus_auratus
ENSCSEG00000001601	rad54b	99	55.517	ENSMICG00000000754	-	99	55.517	Microcebus_murinus
ENSCSEG00000001601	rad54b	99	54.241	ENSMOCG00000020035	Rad54b	99	54.241	Microtus_ochrogaster
ENSCSEG00000001601	rad54b	99	78.767	ENSMMOG00000003394	rad54b	99	78.767	Mola_mola
ENSCSEG00000001601	rad54b	93	58.344	ENSMODG00000007343	-	97	58.564	Monodelphis_domestica
ENSCSEG00000001601	rad54b	75	84.530	ENSMALG00000001520	rad54b	99	84.665	Monopterus_albus
ENSCSEG00000001601	rad54b	99	55.942	MGP_CAROLIEiJ_G0025810	Rad54b	99	55.942	Mus_caroli
ENSCSEG00000001601	rad54b	99	55.493	ENSMUSG00000078773	Rad54b	99	55.493	Mus_musculus
ENSCSEG00000001601	rad54b	99	55.381	MGP_PahariEiJ_G0023933	Rad54b	99	55.381	Mus_pahari
ENSCSEG00000001601	rad54b	99	55.717	MGP_SPRETEiJ_G0026758	Rad54b	99	55.717	Mus_spretus
ENSCSEG00000001601	rad54b	93	58.491	ENSMPUG00000008878	-	97	58.491	Mustela_putorius_furo
ENSCSEG00000001601	rad54b	93	58.764	ENSMLUG00000008953	-	86	58.764	Myotis_lucifugus
ENSCSEG00000001601	rad54b	99	54.324	ENSNGAG00000017537	Rad54b	99	54.324	Nannospalax_galili
ENSCSEG00000001601	rad54b	99	81.097	ENSNBRG00000013394	rad54b	99	81.097	Neolamprologus_brichardi
ENSCSEG00000001601	rad54b	97	56.121	ENSNLEG00000003062	-	99	56.849	Nomascus_leucogenys
ENSCSEG00000001601	rad54b	74	62.183	ENSMEUG00000012426	-	69	62.183	Notamacropus_eugenii
ENSCSEG00000001601	rad54b	81	75.000	ENSODEG00000002650	-	93	75.000	Octodon_degus
ENSCSEG00000001601	rad54b	96	57.282	ENSODEG00000019564	-	90	57.282	Octodon_degus
ENSCSEG00000001601	rad54b	99	83.753	ENSONIG00000006067	rad54b	95	83.753	Oreochromis_niloticus
ENSCSEG00000001601	rad54b	88	59.162	ENSOANG00000011348	-	99	59.162	Ornithorhynchus_anatinus
ENSCSEG00000001601	rad54b	96	57.805	ENSOCUG00000016478	-	89	57.824	Oryctolagus_cuniculus
ENSCSEG00000001601	rad54b	99	80.682	ENSORLG00000008918	rad54b	99	82.582	Oryzias_latipes
ENSCSEG00000001601	rad54b	75	82.426	ENSORLG00020012171	rad54b	99	82.426	Oryzias_latipes_hni
ENSCSEG00000001601	rad54b	99	80.076	ENSORLG00015018536	rad54b	90	80.076	Oryzias_latipes_hsok
ENSCSEG00000001601	rad54b	91	79.869	ENSOMEG00000004345	rad54b	99	79.869	Oryzias_melastigma
ENSCSEG00000001601	rad54b	92	57.089	ENSOGAG00000007854	-	86	57.089	Otolemur_garnettii
ENSCSEG00000001601	rad54b	93	58.720	ENSOARG00000007691	-	97	58.720	Ovis_aries
ENSCSEG00000001601	rad54b	99	55.774	ENSPPAG00000029572	-	95	55.774	Pan_paniscus
ENSCSEG00000001601	rad54b	98	61.538	ENSPPRG00000007571	-	99	58.095	Panthera_pardus
ENSCSEG00000001601	rad54b	85	58.095	ENSPTIG00000012670	-	99	58.095	Panthera_tigris_altaica
ENSCSEG00000001601	rad54b	99	57.002	ENSPTRG00000020427	-	99	57.123	Pan_troglodytes
ENSCSEG00000001601	rad54b	99	61.538	ENSPANG00000019566	-	93	61.538	Papio_anubis
ENSCSEG00000001601	rad54b	93	68.388	ENSPKIG00000014974	rad54b	86	68.388	Paramormyrops_kingsleyae
ENSCSEG00000001601	rad54b	99	60.051	ENSPSIG00000002383	-	95	60.127	Pelodiscus_sinensis
ENSCSEG00000001601	rad54b	99	54.770	ENSPEMG00000012133	Rad54b	99	54.770	Peromyscus_maniculatus_bairdii
ENSCSEG00000001601	rad54b	92	57.468	ENSPMAG00000002916	rad54b	98	57.468	Petromyzon_marinus
ENSCSEG00000001601	rad54b	94	58.647	ENSPCIG00000020151	-	94	58.292	Phascolarctos_cinereus
ENSCSEG00000001601	rad54b	99	80.123	ENSPFOG00000023411	rad54b	92	80.123	Poecilia_formosa
ENSCSEG00000001601	rad54b	99	80.000	ENSPLAG00000010430	rad54b	92	80.000	Poecilia_latipinna
ENSCSEG00000001601	rad54b	99	81.692	ENSPMEG00000016873	rad54b	99	79.142	Poecilia_mexicana
ENSCSEG00000001601	rad54b	99	81.407	ENSPREG00000018443	rad54b	99	78.216	Poecilia_reticulata
ENSCSEG00000001601	rad54b	99	57.002	ENSPPYG00000018750	-	95	57.002	Pongo_abelii
ENSCSEG00000001601	rad54b	96	73.333	ENSPCOG00000026845	-	89	73.333	Propithecus_coquereli
ENSCSEG00000001601	rad54b	88	56.991	ENSPVAG00000000261	-	86	56.991	Pteropus_vampyrus
ENSCSEG00000001601	rad54b	93	82.592	ENSPNYG00000018303	rad54b	96	82.592	Pundamilia_nyererei
ENSCSEG00000001601	rad54b	99	64.581	ENSPNAG00000000295	rad54b	99	64.581	Pygocentrus_nattereri
ENSCSEG00000001601	rad54b	99	55.518	ENSRNOG00000039949	Rad54b	99	55.518	Rattus_norvegicus
ENSCSEG00000001601	rad54b	99	61.538	ENSRBIG00000020419	-	93	61.538	Rhinopithecus_bieti
ENSCSEG00000001601	rad54b	99	61.538	ENSRROG00000039897	-	93	61.538	Rhinopithecus_roxellana
ENSCSEG00000001601	rad54b	88	36.220	YBR073W	RDH54	82	36.341	Saccharomyces_cerevisiae
ENSCSEG00000001601	rad54b	99	58.974	ENSSBOG00000028501	-	93	58.974	Saimiri_boliviensis_boliviensis
ENSCSEG00000001601	rad54b	94	59.301	ENSSHAG00000017038	-	87	59.301	Sarcophilus_harrisii
ENSCSEG00000001601	rad54b	67	70.070	ENSSFOG00015008483	rad54b	89	70.070	Scleropages_formosus
ENSCSEG00000001601	rad54b	99	85.264	ENSSMAG00000018659	rad54b	99	81.998	Scophthalmus_maximus
ENSCSEG00000001601	rad54b	96	84.733	ENSSDUG00000001122	rad54b	88	84.733	Seriola_dumerili
ENSCSEG00000001601	rad54b	99	85.153	ENSSLDG00000013787	rad54b	99	80.819	Seriola_lalandi_dorsalis
ENSCSEG00000001601	rad54b	99	56.854	ENSSPUG00000016497	-	99	56.854	Sphenodon_punctatus
ENSCSEG00000001601	rad54b	99	79.796	ENSSPAG00000012800	rad54b	99	79.977	Stegastes_partitus
ENSCSEG00000001601	rad54b	99	54.857	ENSSSCG00000006101	-	98	58.868	Sus_scrofa
ENSCSEG00000001601	rad54b	98	87.500	ENSTGUG00000011880	-	88	60.197	Taeniopygia_guttata
ENSCSEG00000001601	rad54b	99	78.858	ENSTRUG00000010015	rad54b	92	78.858	Takifugu_rubripes
ENSCSEG00000001601	rad54b	99	72.414	ENSTTRG00000006312	-	88	54.223	Tursiops_truncatus
ENSCSEG00000001601	rad54b	93	58.386	ENSUMAG00000016401	-	86	58.386	Ursus_maritimus
ENSCSEG00000001601	rad54b	93	59.194	ENSVPAG00000003157	-	87	59.194	Vicugna_pacos
ENSCSEG00000001601	rad54b	99	48.226	ENSXETG00000025924	rad54b	99	51.601	Xenopus_tropicalis
ENSCSEG00000001601	rad54b	99	77.972	ENSXMAG00000013141	rad54b	99	77.972	Xiphophorus_maculatus