EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001643 (Gene tree)
Gene ID: 103383430
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 8606 bases
Position: chr9:4090834-4099439
Accession: 103383430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000002457	TRM	PF02005.16	1e-140	1	1
ENSCSEP00000002451	TRM	PF02005.16	1.3e-140	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000002497	-	2175	-	ENSCSEP00000002457	607 (aa)	-	-
ENSCSET00000002491	-	2118	XM_008316534	ENSCSEP00000002451	669 (aa)	XP_008314756	UPI0004966048

Gene Model

Click here to download ENSCSEG00000001643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001643	trmt1	84	68.932	ENSG00000104907	TRMT1	99	73.298	Homo_sapiens
ENSCSEG00000001643	trmt1	84	68.288	ENSAMEG00000012598	TRMT1	87	65.695	Ailuropoda_melanoleuca
ENSCSEG00000001643	trmt1	92	74.718	ENSACIG00000018680	trmt1	97	74.718	Amphilophus_citrinellus
ENSCSEG00000001643	trmt1	100	78.475	ENSAOCG00000006781	trmt1	100	78.475	Amphiprion_ocellaris
ENSCSEG00000001643	trmt1	100	78.625	ENSAPEG00000007712	trmt1	100	78.625	Amphiprion_percula
ENSCSEG00000001643	trmt1	100	81.426	ENSATEG00000001872	trmt1	100	81.426	Anabas_testudineus
ENSCSEG00000001643	trmt1	88	67.587	ENSACAG00000003825	TRMT1	98	66.172	Anolis_carolinensis
ENSCSEG00000001643	trmt1	84	67.836	ENSANAG00000023016	TRMT1	92	65.499	Aotus_nancymaae
ENSCSEG00000001643	trmt1	95	78.076	ENSACLG00000010073	trmt1	95	82.504	Astatotilapia_calliptera
ENSCSEG00000001643	trmt1	94	75.130	ENSAMXG00000012026	trmt1	94	73.668	Astyanax_mexicanus
ENSCSEG00000001643	trmt1	88	66.543	ENSBTAG00000019325	TRMT1	86	64.145	Bos_taurus
ENSCSEG00000001643	trmt1	84	40.655	WBGene00006613	trm-1	93	40.655	Caenorhabditis_elegans
ENSCSEG00000001643	trmt1	84	67.773	ENSCJAG00000004566	TRMT1	88	64.460	Callithrix_jacchus
ENSCSEG00000001643	trmt1	84	68.872	ENSCAFG00000017070	TRMT1	91	66.209	Canis_familiaris
ENSCSEG00000001643	trmt1	84	68.421	ENSCAFG00020005397	TRMT1	89	65.921	Canis_lupus_dingo
ENSCSEG00000001643	trmt1	88	66.605	ENSCHIG00000013569	TRMT1	92	64.368	Capra_hircus
ENSCSEG00000001643	trmt1	84	63.748	ENSTSYG00000003207	TRMT1	87	63.748	Carlito_syrichta
ENSCSEG00000001643	trmt1	78	65.199	ENSCAPG00000003355	TRMT1	94	61.132	Cavia_aperea
ENSCSEG00000001643	trmt1	84	66.342	ENSCPOG00000011754	TRMT1	87	64.685	Cavia_porcellus
ENSCSEG00000001643	trmt1	87	64.607	ENSCCAG00000022263	TRMT1	92	63.986	Cebus_capucinus
ENSCSEG00000001643	trmt1	84	68.677	ENSCATG00000039850	TRMT1	86	66.783	Cercocebus_atys
ENSCSEG00000001643	trmt1	77	54.352	ENSCATG00000038220	-	85	54.352	Cercocebus_atys
ENSCSEG00000001643	trmt1	84	67.315	ENSCLAG00000015295	TRMT1	89	62.982	Chinchilla_lanigera
ENSCSEG00000001643	trmt1	78	68.908	ENSCSAG00000006500	TRMT1	90	68.908	Chlorocebus_sabaeus
ENSCSEG00000001643	trmt1	84	71.150	ENSCPBG00000023866	TRMT1	84	69.519	Chrysemys_picta_bellii
ENSCSEG00000001643	trmt1	86	49.808	ENSCING00000002884	-	99	48.654	Ciona_intestinalis
ENSCSEG00000001643	trmt1	84	51.961	ENSCSAVG00000010927	-	100	50.647	Ciona_savignyi
ENSCSEG00000001643	trmt1	85	52.408	ENSCANG00000031650	-	91	51.031	Colobus_angolensis_palliatus
ENSCSEG00000001643	trmt1	84	52.696	ENSCANG00000040631	TRMT1	86	52.696	Colobus_angolensis_palliatus
ENSCSEG00000001643	trmt1	83	67.451	ENSCGRG00001022594	Trmt1	87	66.021	Cricetulus_griseus_chok1gshd
ENSCSEG00000001643	trmt1	83	67.451	ENSCGRG00000017732	Trmt1	86	66.021	Cricetulus_griseus_crigri
ENSCSEG00000001643	trmt1	100	76.339	ENSCVAG00000011886	trmt1	100	76.339	Cyprinodon_variegatus
ENSCSEG00000001643	trmt1	93	75.261	ENSDARG00000010978	trmt1	94	74.097	Danio_rerio
ENSCSEG00000001643	trmt1	76	45.229	ENSDNOG00000048240	-	89	45.229	Dasypus_novemcinctus
ENSCSEG00000001643	trmt1	84	66.082	ENSDORG00000014298	Trmt1	86	64.623	Dipodomys_ordii
ENSCSEG00000001643	trmt1	86	47.081	FBgn0032430	CG6388	93	46.014	Drosophila_melanogaster
ENSCSEG00000001643	trmt1	84	51.373	ENSEBUG00000003449	trmt1	75	51.650	Eptatretus_burgeri
ENSCSEG00000001643	trmt1	84	68.031	ENSEASG00005004050	TRMT1	90	65.969	Equus_asinus_asinus
ENSCSEG00000001643	trmt1	84	68.031	ENSECAG00000016149	TRMT1	90	65.969	Equus_caballus
ENSCSEG00000001643	trmt1	58	57.550	ENSEEUG00000014102	-	100	55.696	Erinaceus_europaeus
ENSCSEG00000001643	trmt1	93	73.196	ENSELUG00000021659	trmt1	96	72.231	Esox_lucius
ENSCSEG00000001643	trmt1	84	67.892	ENSFCAG00000000483	TRMT1	87	65.739	Felis_catus
ENSCSEG00000001643	trmt1	84	68.031	ENSFDAG00000007386	TRMT1	86	65.149	Fukomys_damarensis
ENSCSEG00000001643	trmt1	99	76.519	ENSFHEG00000012865	trmt1	99	76.519	Fundulus_heteroclitus
ENSCSEG00000001643	trmt1	84	74.168	ENSGMOG00000006564	trmt1	99	73.063	Gadus_morhua
ENSCSEG00000001643	trmt1	90	83.500	ENSGAFG00000011862	trmt1	94	83.500	Gambusia_affinis
ENSCSEG00000001643	trmt1	86	80.769	ENSGACG00000000227	trmt1	94	80.104	Gasterosteus_aculeatus
ENSCSEG00000001643	trmt1	84	70.760	ENSGAGG00000016432	TRMT1	84	68.984	Gopherus_agassizii
ENSCSEG00000001643	trmt1	84	68.932	ENSGGOG00000014007	TRMT1	87	67.247	Gorilla_gorilla
ENSCSEG00000001643	trmt1	84	73.333	ENSHBUG00000008821	trmt1	92	73.770	Haplochromis_burtoni
ENSCSEG00000001643	trmt1	84	66.926	ENSHGLG00000015972	TRMT1	87	64.799	Heterocephalus_glaber_female
ENSCSEG00000001643	trmt1	84	60.664	ENSHGLG00100018112	TRMT1	87	60.664	Heterocephalus_glaber_male
ENSCSEG00000001643	trmt1	86	80.962	ENSHCOG00000009447	trmt1	91	79.245	Hippocampus_comes
ENSCSEG00000001643	trmt1	85	76.560	ENSIPUG00000002899	trmt1	86	76.068	Ictalurus_punctatus
ENSCSEG00000001643	trmt1	84	67.510	ENSSTOG00000012531	TRMT1	87	65.499	Ictidomys_tridecemlineatus
ENSCSEG00000001643	trmt1	84	68.217	ENSJJAG00000017154	Trmt1	88	66.318	Jaculus_jaculus
ENSCSEG00000001643	trmt1	94	81.369	ENSKMAG00000011809	trmt1	99	82.453	Kryptolebias_marmoratus
ENSCSEG00000001643	trmt1	92	81.802	ENSLBEG00000012703	trmt1	100	76.741	Labrus_bergylta
ENSCSEG00000001643	trmt1	84	62.403	ENSLACG00000014585	TRMT1	94	61.872	Latimeria_chalumnae
ENSCSEG00000001643	trmt1	79	75.726	ENSLOCG00000006479	trmt1	99	67.652	Lepisosteus_oculatus
ENSCSEG00000001643	trmt1	84	67.899	ENSLAFG00000014072	TRMT1	88	66.261	Loxodonta_africana
ENSCSEG00000001643	trmt1	84	68.677	ENSMFAG00000033143	TRMT1	86	67.016	Macaca_fascicularis
ENSCSEG00000001643	trmt1	84	65.511	ENSMMUG00000001167	TRMT1	87	61.888	Macaca_mulatta
ENSCSEG00000001643	trmt1	84	68.677	ENSMNEG00000037867	TRMT1	86	67.016	Macaca_nemestrina
ENSCSEG00000001643	trmt1	84	68.482	ENSMLEG00000016142	TRMT1	87	66.841	Mandrillus_leucophaeus
ENSCSEG00000001643	trmt1	99	79.703	ENSMAMG00000004357	trmt1	100	79.223	Mastacembelus_armatus
ENSCSEG00000001643	trmt1	100	75.934	ENSMZEG00005014510	trmt1	100	75.934	Maylandia_zebra
ENSCSEG00000001643	trmt1	84	66.602	ENSMAUG00000011134	Trmt1	87	65.096	Mesocricetus_auratus
ENSCSEG00000001643	trmt1	84	68.482	ENSMICG00000000793	TRMT1	86	66.783	Microcebus_murinus
ENSCSEG00000001643	trmt1	84	67.121	ENSMOCG00000015895	Trmt1	86	65.674	Microtus_ochrogaster
ENSCSEG00000001643	trmt1	93	78.594	ENSMMOG00000011097	trmt1	100	78.594	Mola_mola
ENSCSEG00000001643	trmt1	88	67.096	ENSMODG00000011619	TRMT1	96	65.116	Monodelphis_domestica
ENSCSEG00000001643	trmt1	83	67.583	MGP_CAROLIEiJ_G0031304	Trmt1	86	66.138	Mus_caroli
ENSCSEG00000001643	trmt1	83	67.780	ENSMUSG00000001909	Trmt1	86	66.314	Mus_musculus
ENSCSEG00000001643	trmt1	84	67.451	MGP_SPRETEiJ_G0032422	Trmt1	86	66.138	Mus_spretus
ENSCSEG00000001643	trmt1	84	69.066	ENSMPUG00000004210	TRMT1	83	66.552	Mustela_putorius_furo
ENSCSEG00000001643	trmt1	84	69.246	ENSMLUG00000012809	TRMT1	86	67.188	Myotis_lucifugus
ENSCSEG00000001643	trmt1	84	66.732	ENSNGAG00000022486	Trmt1	87	64.533	Nannospalax_galili
ENSCSEG00000001643	trmt1	75	86.176	ENSNBRG00000024376	trmt1	87	86.176	Neolamprologus_brichardi
ENSCSEG00000001643	trmt1	64	70.297	ENSNLEG00000013019	-	83	65.646	Nomascus_leucogenys
ENSCSEG00000001643	trmt1	84	69.380	ENSMEUG00000013756	TRMT1	97	67.365	Notamacropus_eugenii
ENSCSEG00000001643	trmt1	68	72.000	ENSOPRG00000009471	-	71	72.000	Ochotona_princeps
ENSCSEG00000001643	trmt1	84	66.862	ENSODEG00000010323	TRMT1	87	65.088	Octodon_degus
ENSCSEG00000001643	trmt1	100	78.475	ENSONIG00000000400	trmt1	96	83.953	Oreochromis_niloticus
ENSCSEG00000001643	trmt1	77	69.474	ENSOCUG00000021934	TRMT1	89	69.474	Oryctolagus_cuniculus
ENSCSEG00000001643	trmt1	100	72.337	ENSORLG00000020074	trmt1	99	75.318	Oryzias_latipes
ENSCSEG00000001643	trmt1	100	76.233	ENSORLG00020007561	trmt1	97	79.119	Oryzias_latipes_hni
ENSCSEG00000001643	trmt1	100	76.269	ENSORLG00015006547	trmt1	99	76.269	Oryzias_latipes_hsok
ENSCSEG00000001643	trmt1	100	77.015	ENSOMEG00000019343	trmt1	99	77.015	Oryzias_melastigma
ENSCSEG00000001643	trmt1	84	68.155	ENSOGAG00000025576	TRMT1	90	66.492	Otolemur_garnettii
ENSCSEG00000001643	trmt1	86	53.390	ENSOARG00000009397	TRMT1	82	53.584	Ovis_aries
ENSCSEG00000001643	trmt1	84	60.234	ENSPPRG00000012117	TRMT1	87	59.370	Panthera_pardus
ENSCSEG00000001643	trmt1	63	66.551	ENSPTIG00000008833	TRMT1	82	66.551	Panthera_tigris_altaica
ENSCSEG00000001643	trmt1	84	68.932	ENSPTRG00000010557	TRMT1	87	67.247	Pan_troglodytes
ENSCSEG00000001643	trmt1	82	51.072	ENSPTRG00000050421	-	89	49.650	Pan_troglodytes
ENSCSEG00000001643	trmt1	84	68.677	ENSPANG00000009247	TRMT1	87	67.016	Papio_anubis
ENSCSEG00000001643	trmt1	72	56.208	ENSPANG00000034058	-	78	56.208	Papio_anubis
ENSCSEG00000001643	trmt1	99	70.847	ENSPKIG00000005309	trmt1	92	73.151	Paramormyrops_kingsleyae
ENSCSEG00000001643	trmt1	87	55.910	ENSPSIG00000008762	TRMT1	80	56.835	Pelodiscus_sinensis
ENSCSEG00000001643	trmt1	85	83.689	ENSPMGG00000019764	trmt1	91	82.716	Periophthalmus_magnuspinnatus
ENSCSEG00000001643	trmt1	84	67.315	ENSPEMG00000016247	Trmt1	86	65.794	Peromyscus_maniculatus_bairdii
ENSCSEG00000001643	trmt1	84	64.244	ENSPMAG00000004329	trmt1	90	62.742	Petromyzon_marinus
ENSCSEG00000001643	trmt1	88	67.837	ENSPCIG00000019273	TRMT1	92	65.557	Phascolarctos_cinereus
ENSCSEG00000001643	trmt1	90	83.667	ENSPFOG00000008527	trmt1	94	83.667	Poecilia_formosa
ENSCSEG00000001643	trmt1	90	82.333	ENSPLAG00000018788	trmt1	93	84.037	Poecilia_latipinna
ENSCSEG00000001643	trmt1	90	83.500	ENSPMEG00000013120	trmt1	94	83.500	Poecilia_mexicana
ENSCSEG00000001643	trmt1	88	83.054	ENSPREG00000000211	trmt1	90	82.107	Poecilia_reticulata
ENSCSEG00000001643	trmt1	84	68.544	ENSPPYG00000009622	TRMT1	87	66.899	Pongo_abelii
ENSCSEG00000001643	trmt1	84	61.988	ENSPCAG00000003698	TRMT1	87	61.189	Procavia_capensis
ENSCSEG00000001643	trmt1	84	68.288	ENSPCOG00000008653	TRMT1	87	66.434	Propithecus_coquereli
ENSCSEG00000001643	trmt1	88	66.239	ENSPVAG00000015076	TRMT1	93	63.577	Pteropus_vampyrus
ENSCSEG00000001643	trmt1	87	80.274	ENSPNYG00000013960	trmt1	95	80.274	Pundamilia_nyererei
ENSCSEG00000001643	trmt1	93	67.478	ENSPNAG00000024859	trmt1	99	66.355	Pygocentrus_nattereri
ENSCSEG00000001643	trmt1	83	67.191	ENSRNOG00000002914	Trmt1	89	65.608	Rattus_norvegicus
ENSCSEG00000001643	trmt1	84	68.811	ENSRBIG00000038324	TRMT1	86	67.133	Rhinopithecus_bieti
ENSCSEG00000001643	trmt1	85	50.096	ENSRBIG00000037505	-	92	49.317	Rhinopithecus_bieti
ENSCSEG00000001643	trmt1	85	49.328	ENSRROG00000031847	-	91	48.635	Rhinopithecus_roxellana
ENSCSEG00000001643	trmt1	84	68.811	ENSRROG00000028599	TRMT1	86	67.133	Rhinopithecus_roxellana
ENSCSEG00000001643	trmt1	87	36.823	YDR120C	-	94	37.004	Saccharomyces_cerevisiae
ENSCSEG00000001643	trmt1	84	66.667	ENSSBOG00000028861	TRMT1	92	64.510	Saimiri_boliviensis_boliviensis
ENSCSEG00000001643	trmt1	84	70.233	ENSSHAG00000014381	TRMT1	93	68.007	Sarcophilus_harrisii
ENSCSEG00000001643	trmt1	85	81.907	ENSSFOG00015004139	trmt1	90	75.369	Scleropages_formosus
ENSCSEG00000001643	trmt1	99	77.184	ENSSMAG00000021136	trmt1	100	75.806	Scophthalmus_maximus
ENSCSEG00000001643	trmt1	99	80.656	ENSSDUG00000012740	trmt1	100	79.941	Seriola_dumerili
ENSCSEG00000001643	trmt1	100	79.495	ENSSLDG00000005971	trmt1	100	79.792	Seriola_lalandi_dorsalis
ENSCSEG00000001643	trmt1	84	65.631	ENSSARG00000005138	TRMT1	91	65.631	Sorex_araneus
ENSCSEG00000001643	trmt1	84	55.877	ENSSPUG00000001084	TRMT1	91	52.414	Sphenodon_punctatus
ENSCSEG00000001643	trmt1	100	76.831	ENSSPAG00000007153	trmt1	99	82.689	Stegastes_partitus
ENSCSEG00000001643	trmt1	84	68.164	ENSSSCG00000013744	TRMT1	91	65.523	Sus_scrofa
ENSCSEG00000001643	trmt1	99	71.104	ENSTRUG00000010700	trmt1	95	70.840	Takifugu_rubripes
ENSCSEG00000001643	trmt1	85	85.049	ENSTNIG00000018808	trmt1	98	83.774	Tetraodon_nigroviridis
ENSCSEG00000001643	trmt1	84	65.370	ENSTTRG00000006379	TRMT1	87	63.811	Tursiops_truncatus
ENSCSEG00000001643	trmt1	91	65.062	ENSUAMG00000022911	TRMT1	95	63.373	Ursus_americanus
ENSCSEG00000001643	trmt1	84	68.093	ENSUMAG00000006027	TRMT1	91	65.695	Ursus_maritimus
ENSCSEG00000001643	trmt1	84	68.872	ENSVVUG00000024177	TRMT1	88	66.209	Vulpes_vulpes
ENSCSEG00000001643	trmt1	75	70.217	ENSXETG00000033863	TRMT1	92	70.217	Xenopus_tropicalis
ENSCSEG00000001643	trmt1	90	83.667	ENSXCOG00000015733	trmt1	94	83.833	Xiphophorus_couchianus
ENSCSEG00000001643	trmt1	86	85.689	ENSXMAG00000013823	trmt1	99	85.864	Xiphophorus_maculatus