EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001744 (Gene tree)
Gene ID: 103379892
Gene Symbol: -
Alias: -
Full Name: putative ATP-dependent RNA helicase TDRD12
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 8831 bases
Position: chr6:6499670-6508500
Accession: 103379892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000002625	TUDOR	PF00567.24	1.8e-21	1	2
ENSCSEP00000002625	TUDOR	PF00567.24	1.8e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000002666	-	3856	XM_008311596	ENSCSEP00000002625	1252 (aa)	XP_008309818	-

Gene Model

Click here to download ENSCSEG00000001744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001744's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001744	-	78	67.538	ENSAPOG00000006421	tdrd12	94	67.538	Acanthochromis_polyacanthus
ENSCSEG00000001744	-	58	41.081	ENSAMEG00000015440	-	90	41.081	Ailuropoda_melanoleuca
ENSCSEG00000001744	-	78	67.302	ENSACIG00000021652	tdrd12	97	67.302	Amphilophus_citrinellus
ENSCSEG00000001744	-	74	65.487	ENSAOCG00000016463	tdrd12	79	68.246	Amphiprion_ocellaris
ENSCSEG00000001744	-	76	68.220	ENSAPEG00000015105	tdrd12	92	68.220	Amphiprion_percula
ENSCSEG00000001744	-	81	69.054	ENSATEG00000011608	tdrd12	100	69.054	Anabas_testudineus
ENSCSEG00000001744	-	72	37.983	ENSAPLG00000011417	-	84	37.983	Anas_platyrhynchos
ENSCSEG00000001744	-	58	41.074	ENSACAG00000029615	-	77	41.074	Anolis_carolinensis
ENSCSEG00000001744	-	75	39.706	ENSANAG00000023166	-	80	39.706	Aotus_nancymaae
ENSCSEG00000001744	-	73	50.862	ENSAMXG00000013811	tdrd12	92	50.862	Astyanax_mexicanus
ENSCSEG00000001744	-	75	39.439	ENSCJAG00000000763	-	80	39.439	Callithrix_jacchus
ENSCSEG00000001744	-	74	40.706	ENSCAFG00000007505	TDRD12	71	42.765	Canis_familiaris
ENSCSEG00000001744	-	74	40.706	ENSCAFG00020019790	-	78	40.706	Canis_lupus_dingo
ENSCSEG00000001744	-	73	40.082	ENSTSYG00000012034	-	79	40.082	Carlito_syrichta
ENSCSEG00000001744	-	68	43.202	ENSCPOG00000002876	-	73	43.202	Cavia_porcellus
ENSCSEG00000001744	-	75	39.706	ENSCCAG00000037592	-	80	39.706	Cebus_capucinus
ENSCSEG00000001744	-	74	39.674	ENSCATG00000038627	-	79	39.674	Cercocebus_atys
ENSCSEG00000001744	-	75	40.189	ENSCLAG00000012138	-	73	40.189	Chinchilla_lanigera
ENSCSEG00000001744	-	74	40.625	ENSCSAG00000004794	-	79	40.625	Chlorocebus_sabaeus
ENSCSEG00000001744	-	71	41.630	ENSCPBG00000000147	-	86	41.630	Chrysemys_picta_bellii
ENSCSEG00000001744	-	75	38.767	ENSCANG00000040785	-	79	38.767	Colobus_angolensis_palliatus
ENSCSEG00000001744	-	68	43.284	ENSCGRG00001021407	-	73	43.284	Cricetulus_griseus_chok1gshd
ENSCSEG00000001744	-	66	42.985	ENSCGRG00000007286	-	72	42.985	Cricetulus_griseus_crigri
ENSCSEG00000001744	-	54	59.138	ENSCVAG00000004277	tdrd12	91	59.138	Cyprinodon_variegatus
ENSCSEG00000001744	-	95	44.279	ENSDARG00000075217	tdrd12	71	52.814	Danio_rerio
ENSCSEG00000001744	-	74	40.621	ENSDNOG00000017244	-	72	40.621	Dasypus_novemcinctus
ENSCSEG00000001744	-	66	45.603	ENSDORG00000012134	-	71	45.603	Dipodomys_ordii
ENSCSEG00000001744	-	74	40.000	ENSEASG00005021053	-	71	40.000	Equus_asinus_asinus
ENSCSEG00000001744	-	65	40.329	ENSEEUG00000008457	-	75	40.329	Erinaceus_europaeus
ENSCSEG00000001744	-	82	50.983	ENSELUG00000017494	tdrd12	82	51.106	Esox_lucius
ENSCSEG00000001744	-	72	36.011	ENSFALG00000000259	-	73	36.011	Ficedula_albicollis
ENSCSEG00000001744	-	68	43.202	ENSFDAG00000014797	-	72	43.202	Fukomys_damarensis
ENSCSEG00000001744	-	56	60.246	ENSFHEG00000002884	-	70	60.246	Fundulus_heteroclitus
ENSCSEG00000001744	-	74	37.566	ENSGALG00000004704	-	78	37.883	Gallus_gallus
ENSCSEG00000001744	-	94	55.907	ENSGAFG00000003729	tdrd12	87	55.316	Gambusia_affinis
ENSCSEG00000001744	-	71	41.485	ENSGAGG00000000247	-	85	41.485	Gopherus_agassizii
ENSCSEG00000001744	-	75	39.946	ENSGGOG00000011938	-	80	39.946	Gorilla_gorilla
ENSCSEG00000001744	-	78	64.236	ENSHBUG00000020426	tdrd12	96	64.236	Haplochromis_burtoni
ENSCSEG00000001744	-	66	44.516	ENSHGLG00000015608	-	74	44.516	Heterocephalus_glaber_female
ENSCSEG00000001744	-	72	40.915	ENSHGLG00100008227	-	84	40.915	Heterocephalus_glaber_male
ENSCSEG00000001744	-	74	53.589	ENSIPUG00000016825	tdrd12	71	53.589	Ictalurus_punctatus
ENSCSEG00000001744	-	65	43.791	ENSSTOG00000013638	-	70	43.791	Ictidomys_tridecemlineatus
ENSCSEG00000001744	-	61	62.104	ENSKMAG00000008031	tdrd12	85	62.104	Kryptolebias_marmoratus
ENSCSEG00000001744	-	76	67.042	ENSLBEG00000005601	tdrd12	93	66.620	Labrus_bergylta
ENSCSEG00000001744	-	73	42.798	ENSLACG00000010650	-	87	41.447	Latimeria_chalumnae
ENSCSEG00000001744	-	80	48.357	ENSLOCG00000001690	tdrd12	72	48.357	Lepisosteus_oculatus
ENSCSEG00000001744	-	74	40.405	ENSLAFG00000008698	-	85	40.405	Loxodonta_africana
ENSCSEG00000001744	-	75	40.082	ENSMFAG00000044756	-	80	40.082	Macaca_fascicularis
ENSCSEG00000001744	-	75	40.082	ENSMMUG00000015608	-	80	40.082	Macaca_mulatta
ENSCSEG00000001744	-	74	40.082	ENSMNEG00000043067	-	80	40.082	Macaca_nemestrina
ENSCSEG00000001744	-	70	42.013	ENSMLEG00000042036	-	82	42.013	Mandrillus_leucophaeus
ENSCSEG00000001744	-	78	66.030	ENSMAMG00000013867	tdrd12	92	66.030	Mastacembelus_armatus
ENSCSEG00000001744	-	74	66.216	ENSMZEG00005024214	tdrd12	91	66.216	Maylandia_zebra
ENSCSEG00000001744	-	54	38.012	ENSMGAG00000005627	-	99	38.012	Meleagris_gallopavo
ENSCSEG00000001744	-	66	45.098	ENSMAUG00000013767	-	71	45.098	Mesocricetus_auratus
ENSCSEG00000001744	-	74	41.940	ENSMICG00000003623	-	81	41.940	Microcebus_murinus
ENSCSEG00000001744	-	74	40.878	ENSMOCG00000002366	-	84	40.878	Microtus_ochrogaster
ENSCSEG00000001744	-	77	66.252	ENSMMOG00000018662	tdrd12	94	66.252	Mola_mola
ENSCSEG00000001744	-	71	42.442	ENSMODG00000012286	-	69	42.442	Monodelphis_domestica
ENSCSEG00000001744	-	91	63.248	ENSMALG00000006918	tdrd12	100	63.248	Monopterus_albus
ENSCSEG00000001744	-	74	41.940	MGP_CAROLIEiJ_G0029587	-	84	41.940	Mus_caroli
ENSCSEG00000001744	-	74	41.940	MGP_PahariEiJ_G0012821	-	86	41.192	Mus_pahari
ENSCSEG00000001744	-	74	41.667	MGP_SPRETEiJ_G0030686	-	84	41.667	Mus_spretus
ENSCSEG00000001744	-	75	39.625	ENSMPUG00000007791	-	72	39.625	Mustela_putorius_furo
ENSCSEG00000001744	-	66	42.675	ENSMLUG00000010694	-	83	42.675	Myotis_lucifugus
ENSCSEG00000001744	-	65	44.771	ENSNGAG00000000793	-	70	44.771	Nannospalax_galili
ENSCSEG00000001744	-	55	64.841	ENSNBRG00000017878	-	98	64.841	Neolamprologus_brichardi
ENSCSEG00000001744	-	69	39.295	ENSNLEG00000007635	-	75	39.266	Nomascus_leucogenys
ENSCSEG00000001744	-	67	39.547	ENSOPRG00000015809	-	78	39.547	Ochotona_princeps
ENSCSEG00000001744	-	67	44.514	ENSODEG00000014443	-	72	44.514	Octodon_degus
ENSCSEG00000001744	-	76	63.636	ENSONIG00000010630	tdrd12	84	67.275	Oreochromis_niloticus
ENSCSEG00000001744	-	66	44.444	ENSOCUG00000016911	-	71	44.444	Oryctolagus_cuniculus
ENSCSEG00000001744	-	73	59.530	ENSORLG00000027859	tdrd12	78	59.530	Oryzias_latipes
ENSCSEG00000001744	-	97	51.668	ENSORLG00015020835	tdrd12	85	51.340	Oryzias_latipes_hsok
ENSCSEG00000001744	-	84	56.288	ENSOMEG00000021862	tdrd12	98	56.189	Oryzias_melastigma
ENSCSEG00000001744	-	74	40.385	ENSOGAG00000001571	-	85	40.385	Otolemur_garnettii
ENSCSEG00000001744	-	75	41.050	ENSOARG00000004254	-	74	41.050	Ovis_aries
ENSCSEG00000001744	-	74	39.402	ENSPPAG00000042284	-	79	39.402	Pan_paniscus
ENSCSEG00000001744	-	71	41.871	ENSPPRG00000002389	-	78	41.871	Panthera_pardus
ENSCSEG00000001744	-	75	39.946	ENSPTRG00000010795	TDRD12	79	39.946	Pan_troglodytes
ENSCSEG00000001744	-	75	40.082	ENSPANG00000001203	-	80	40.082	Papio_anubis
ENSCSEG00000001744	-	93	41.807	ENSPKIG00000006407	tdrd12	68	49.537	Paramormyrops_kingsleyae
ENSCSEG00000001744	-	70	41.784	ENSPSIG00000012970	-	100	38.537	Pelodiscus_sinensis
ENSCSEG00000001744	-	78	60.858	ENSPMGG00000022691	tdrd12	97	60.858	Periophthalmus_magnuspinnatus
ENSCSEG00000001744	-	74	41.450	ENSPEMG00000009233	-	82	41.450	Peromyscus_maniculatus_bairdii
ENSCSEG00000001744	-	77	40.187	ENSPCIG00000020993	-	76	40.187	Phascolarctos_cinereus
ENSCSEG00000001744	-	75	67.925	ENSPFOG00000008184	tdrd12	69	67.925	Poecilia_formosa
ENSCSEG00000001744	-	61	62.090	ENSPMEG00000006420	tdrd12	95	62.090	Poecilia_mexicana
ENSCSEG00000001744	-	85	54.170	ENSPREG00000004916	tdrd12	97	53.896	Poecilia_reticulata
ENSCSEG00000001744	-	75	39.946	ENSPPYG00000009821	-	78	39.946	Pongo_abelii
ENSCSEG00000001744	-	57	39.024	ENSPCAG00000013510	-	65	39.024	Procavia_capensis
ENSCSEG00000001744	-	74	39.838	ENSPCOG00000023600	-	83	39.511	Propithecus_coquereli
ENSCSEG00000001744	-	69	40.531	ENSPVAG00000014599	-	79	40.531	Pteropus_vampyrus
ENSCSEG00000001744	-	77	65.418	ENSPNYG00000022866	tdrd12	92	65.418	Pundamilia_nyererei
ENSCSEG00000001744	-	73	51.429	ENSPNAG00000003413	tdrd12	89	51.429	Pygocentrus_nattereri
ENSCSEG00000001744	-	74	41.940	ENSRNOG00000012719	Tdrd12	72	41.940	Rattus_norvegicus
ENSCSEG00000001744	-	74	39.242	ENSRBIG00000019899	-	82	39.242	Rhinopithecus_bieti
ENSCSEG00000001744	-	75	39.946	ENSRROG00000036351	-	80	39.946	Rhinopithecus_roxellana
ENSCSEG00000001744	-	75	40.374	ENSSBOG00000034916	-	80	40.374	Saimiri_boliviensis_boliviensis
ENSCSEG00000001744	-	74	40.758	ENSSHAG00000002599	-	84	40.758	Sarcophilus_harrisii
ENSCSEG00000001744	-	87	41.192	ENSSFOG00015000297	tdrd12	80	51.142	Scleropages_formosus
ENSCSEG00000001744	-	78	71.193	ENSSMAG00000002870	tdrd12	94	71.193	Scophthalmus_maximus
ENSCSEG00000001744	-	82	72.399	ENSSDUG00000017304	tdrd12	100	72.399	Seriola_dumerili
ENSCSEG00000001744	-	82	71.845	ENSSLDG00000004415	tdrd12	100	71.845	Seriola_lalandi_dorsalis
ENSCSEG00000001744	-	67	44.186	ENSSARG00000005357	-	79	44.186	Sorex_araneus
ENSCSEG00000001744	-	70	41.304	ENSSPUG00000013174	-	86	41.304	Sphenodon_punctatus
ENSCSEG00000001744	-	72	64.286	ENSSPAG00000005706	tdrd12	82	65.333	Stegastes_partitus
ENSCSEG00000001744	-	58	40.216	ENSSSCG00000002857	-	73	40.216	Sus_scrofa
ENSCSEG00000001744	-	52	35.693	ENSTGUG00000009121	-	99	35.693	Taeniopygia_guttata
ENSCSEG00000001744	-	77	52.288	ENSTRUG00000021888	tdrd12	97	52.288	Takifugu_rubripes
ENSCSEG00000001744	-	52	48.529	ENSTBEG00000007609	-	59	48.529	Tupaia_belangeri
ENSCSEG00000001744	-	73	41.379	ENSTTRG00000012206	-	84	41.379	Tursiops_truncatus
ENSCSEG00000001744	-	74	40.135	ENSUAMG00000007298	-	79	40.135	Ursus_americanus
ENSCSEG00000001744	-	74	40.270	ENSUMAG00000014314	-	79	40.270	Ursus_maritimus
ENSCSEG00000001744	-	66	37.519	ENSVPAG00000012051	-	81	37.519	Vicugna_pacos
ENSCSEG00000001744	-	75	40.836	ENSVVUG00000016637	-	74	40.841	Vulpes_vulpes
ENSCSEG00000001744	-	52	38.931	ENSXETG00000031945	-	72	38.931	Xenopus_tropicalis
ENSCSEG00000001744	-	76	62.821	ENSXMAG00000020908	tdrd12	96	62.821	Xiphophorus_maculatus