EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000001857 (Gene tree)
Gene ID
103382259
Gene Symbol
-
Alias
-
Full Name
prolyl 4-hydroxylase subunit alpha-1-like
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
6278 bases
Position
chr8:14366335-14372612
Accession
103382259
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP000000028212OG-FeII_OxyPF03171.207.7e-0811
ENSCSEP000000028152OG-FeII_OxyPF03171.201e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000002865-1377-ENSCSEP00000002821458 (aa)--
ENSCSET00000002859-2795XM_008314981ENSCSEP00000002815539 (aa)XP_008313203UPI0004981229
Gene Model
Click here to download ENSCSEG00000001857's gene model file
Pathways
Pathway IDPathway NameSource
csem00330Arginine and proline metabolismKEGG
csem01100Metabolic pathwaysKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001857's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000001857-9770.395ENSCSEG00000004939p4ha1b9670.172
ENSCSEG00000001857-9763.014ENSCSEG00000013215p4ha29559.273
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000001857-8157.802ENSAPOG00000008101p4ha1a9457.802Acanthochromis_polyacanthus
ENSCSEG00000001857-5461.943ENSAPOG00000008032p4ha1a9961.943Acanthochromis_polyacanthus
ENSCSEG00000001857-9680.068ENSACIG00000014303p4ha1a9579.290Amphilophus_citrinellus
ENSCSEG00000001857-9777.632ENSAOCG00000005531p4ha1a9671.705Amphiprion_ocellaris
ENSCSEG00000001857-9682.770ENSAOCG00000005514-9680.426Amphiprion_ocellaris
ENSCSEG00000001857-9780.921ENSAPEG00000010462-9680.233Amphiprion_percula
ENSCSEG00000001857-9874.497ENSAMXG00000018364p4ha1a9674.423Astyanax_mexicanus
ENSCSEG00000001857-9779.322ENSCVAG00000020081p4ha1a9677.519Cyprinodon_variegatus
ENSCSEG00000001857-9575.362ENSDARG00000033537p4ha1a9673.218Danio_rerio
ENSCSEG00000001857-9873.889ENSELUG00000005174p4ha1a9775.000Esox_lucius
ENSCSEG00000001857-9780.038ENSMAMG00000010119p4ha1a9680.154Mastacembelus_armatus
ENSCSEG00000001857-9380.339ENSMMOG00000009210-9477.210Mola_mola
ENSCSEG00000001857-9781.605ENSMALG00000013083-9681.605Monopterus_albus
ENSCSEG00000001857-9874.828ENSORLG00000014906-9173.333Oryzias_latipes
ENSCSEG00000001857-9778.644ENSORLG00020015227-9475.581Oryzias_latipes_hni
ENSCSEG00000001857-9778.644ENSORLG00015012970-9475.775Oryzias_latipes_hsok
ENSCSEG00000001857-9779.322ENSOMEG00000019702-9776.550Oryzias_melastigma
ENSCSEG00000001857-9876.174ENSPKIG00000002519p4ha1a9673.592Paramormyrops_kingsleyae
ENSCSEG00000001857-9780.068ENSPREG00000016136p4ha1a9677.457Poecilia_reticulata
ENSCSEG00000001857-9775.338ENSPNAG00000025732p4ha1a9674.517Pygocentrus_nattereri
ENSCSEG00000001857-9575.714ENSSFOG00015009731p4ha19675.000Scleropages_formosus
ENSCSEG00000001857-9778.716ENSTNIG00000003570-9774.517Tetraodon_nigroviridis

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