EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001953 (Gene tree)
Gene ID: 103377406
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3828 bases
Position: chr1:7418781-7422608
Accession: 103377406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000002965	PseudoU_synth_2	PF00849.22	1.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003009	-	2719	XM_008308212	ENSCSEP00000002965	578 (aa)	XP_008306434	UPI000497A648

Gene Model

Click here to download ENSCSEG00000001953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001953	rpusd2	84	54.845	ENSG00000166133	RPUSD2	85	54.845	Homo_sapiens
ENSCSEG00000001953	rpusd2	99	64.516	ENSAPOG00000000817	rpusd2	100	64.516	Acanthochromis_polyacanthus
ENSCSEG00000001953	rpusd2	83	54.959	ENSAMEG00000016996	RPUSD2	84	54.959	Ailuropoda_melanoleuca
ENSCSEG00000001953	rpusd2	88	70.825	ENSACIG00000024029	rpusd2	99	70.825	Amphilophus_citrinellus
ENSCSEG00000001953	rpusd2	99	64.755	ENSAOCG00000015237	rpusd2	100	64.755	Amphiprion_ocellaris
ENSCSEG00000001953	rpusd2	99	64.587	ENSAPEG00000021763	rpusd2	100	64.587	Amphiprion_percula
ENSCSEG00000001953	rpusd2	99	63.953	ENSATEG00000015242	rpusd2	100	63.953	Anabas_testudineus
ENSCSEG00000001953	rpusd2	76	58.691	ENSAPLG00000004723	RPUSD2	100	58.691	Anas_platyrhynchos
ENSCSEG00000001953	rpusd2	78	57.768	ENSACAG00000013893	RPUSD2	96	56.667	Anolis_carolinensis
ENSCSEG00000001953	rpusd2	84	55.258	ENSANAG00000009691	RPUSD2	85	55.258	Aotus_nancymaae
ENSCSEG00000001953	rpusd2	91	68.762	ENSACLG00000019531	rpusd2	93	68.762	Astatotilapia_calliptera
ENSCSEG00000001953	rpusd2	79	64.742	ENSAMXG00000013376	rpusd2	85	64.410	Astyanax_mexicanus
ENSCSEG00000001953	rpusd2	84	55.556	ENSBTAG00000003193	RPUSD2	84	55.556	Bos_taurus
ENSCSEG00000001953	rpusd2	72	33.094	WBGene00019498	K07E8.7	97	33.094	Caenorhabditis_elegans
ENSCSEG00000001953	rpusd2	84	55.052	ENSCJAG00000020841	RPUSD2	85	55.052	Callithrix_jacchus
ENSCSEG00000001953	rpusd2	83	54.812	ENSCAFG00000009165	RPUSD2	83	54.812	Canis_familiaris
ENSCSEG00000001953	rpusd2	83	54.812	ENSCAFG00020005849	RPUSD2	83	54.812	Canis_lupus_dingo
ENSCSEG00000001953	rpusd2	84	54.845	ENSCHIG00000006152	RPUSD2	84	54.845	Capra_hircus
ENSCSEG00000001953	rpusd2	84	57.113	ENSTSYG00000012844	RPUSD2	86	57.113	Carlito_syrichta
ENSCSEG00000001953	rpusd2	50	56.597	ENSCAPG00000006895	-	98	56.597	Cavia_aperea
ENSCSEG00000001953	rpusd2	84	55.350	ENSCPOG00000013201	RPUSD2	86	55.350	Cavia_porcellus
ENSCSEG00000001953	rpusd2	84	54.845	ENSCCAG00000024378	RPUSD2	85	54.845	Cebus_capucinus
ENSCSEG00000001953	rpusd2	84	55.670	ENSCATG00000043734	RPUSD2	85	55.670	Cercocebus_atys
ENSCSEG00000001953	rpusd2	84	56.148	ENSCLAG00000011862	RPUSD2	86	56.148	Chinchilla_lanigera
ENSCSEG00000001953	rpusd2	84	55.258	ENSCSAG00000007538	RPUSD2	91	55.258	Chlorocebus_sabaeus
ENSCSEG00000001953	rpusd2	62	53.371	ENSCHOG00000004834	RPUSD2	63	53.371	Choloepus_hoffmanni
ENSCSEG00000001953	rpusd2	82	57.434	ENSCPBG00000013419	RPUSD2	92	57.434	Chrysemys_picta_bellii
ENSCSEG00000001953	rpusd2	84	55.670	ENSCANG00000003659	RPUSD2	85	55.670	Colobus_angolensis_palliatus
ENSCSEG00000001953	rpusd2	86	54.672	ENSCGRG00001009839	Rpusd2	84	54.672	Cricetulus_griseus_chok1gshd
ENSCSEG00000001953	rpusd2	86	54.672	ENSCGRG00000012348	Rpusd2	87	54.672	Cricetulus_griseus_crigri
ENSCSEG00000001953	rpusd2	89	68.391	ENSCVAG00000010848	rpusd2	91	68.391	Cyprinodon_variegatus
ENSCSEG00000001953	rpusd2	79	67.462	ENSDARG00000060992	rpusd2	84	64.535	Danio_rerio
ENSCSEG00000001953	rpusd2	84	54.713	ENSDNOG00000047745	RPUSD2	86	54.713	Dasypus_novemcinctus
ENSCSEG00000001953	rpusd2	77	57.965	ENSDORG00000009092	Rpusd2	99	57.965	Dipodomys_ordii
ENSCSEG00000001953	rpusd2	83	43.238	FBgn0032256	RluA-2	84	43.238	Drosophila_melanogaster
ENSCSEG00000001953	rpusd2	76	45.708	FBgn0051719	RluA-1	63	45.708	Drosophila_melanogaster
ENSCSEG00000001953	rpusd2	84	55.328	ENSETEG00000008581	RPUSD2	88	55.328	Echinops_telfairi
ENSCSEG00000001953	rpusd2	74	35.321	ENSEBUG00000012149	rpusd2	83	35.321	Eptatretus_burgeri
ENSCSEG00000001953	rpusd2	84	55.072	ENSEASG00005016463	RPUSD2	83	55.072	Equus_asinus_asinus
ENSCSEG00000001953	rpusd2	84	55.072	ENSECAG00000024178	RPUSD2	83	55.072	Equus_caballus
ENSCSEG00000001953	rpusd2	93	45.996	ENSEEUG00000005132	RPUSD2	96	45.996	Erinaceus_europaeus
ENSCSEG00000001953	rpusd2	86	64.341	ENSELUG00000016786	rpusd2	91	64.341	Esox_lucius
ENSCSEG00000001953	rpusd2	84	53.939	ENSFCAG00000040796	RPUSD2	86	53.939	Felis_catus
ENSCSEG00000001953	rpusd2	77	59.465	ENSFALG00000001122	RPUSD2	97	59.783	Ficedula_albicollis
ENSCSEG00000001953	rpusd2	84	54.878	ENSFDAG00000003070	RPUSD2	91	54.878	Fukomys_damarensis
ENSCSEG00000001953	rpusd2	91	64.043	ENSFHEG00000007518	rpusd2	98	64.043	Fundulus_heteroclitus
ENSCSEG00000001953	rpusd2	84	67.280	ENSGMOG00000011014	rpusd2	99	67.280	Gadus_morhua
ENSCSEG00000001953	rpusd2	83	56.855	ENSGALG00000041216	RPUSD2	94	58.599	Gallus_gallus
ENSCSEG00000001953	rpusd2	84	71.224	ENSGAFG00000003390	rpusd2	85	71.224	Gambusia_affinis
ENSCSEG00000001953	rpusd2	88	68.571	ENSGACG00000008656	rpusd2	99	68.571	Gasterosteus_aculeatus
ENSCSEG00000001953	rpusd2	87	57.564	ENSGAGG00000013098	RPUSD2	96	57.564	Gopherus_agassizii
ENSCSEG00000001953	rpusd2	83	54.658	ENSGGOG00000006684	RPUSD2	85	54.658	Gorilla_gorilla
ENSCSEG00000001953	rpusd2	91	68.946	ENSHBUG00000023777	rpusd2	93	68.946	Haplochromis_burtoni
ENSCSEG00000001953	rpusd2	84	54.620	ENSHGLG00000012765	RPUSD2	86	54.620	Heterocephalus_glaber_female
ENSCSEG00000001953	rpusd2	84	54.620	ENSHGLG00100006653	RPUSD2	86	54.620	Heterocephalus_glaber_male
ENSCSEG00000001953	rpusd2	91	69.245	ENSHCOG00000015587	rpusd2	90	69.245	Hippocampus_comes
ENSCSEG00000001953	rpusd2	82	66.944	ENSIPUG00000021006	rpusd2	81	66.944	Ictalurus_punctatus
ENSCSEG00000001953	rpusd2	88	53.649	ENSSTOG00000025619	RPUSD2	87	53.649	Ictidomys_tridecemlineatus
ENSCSEG00000001953	rpusd2	79	58.568	ENSJJAG00000023160	Rpusd2	93	55.534	Jaculus_jaculus
ENSCSEG00000001953	rpusd2	85	69.155	ENSKMAG00000006618	rpusd2	90	66.729	Kryptolebias_marmoratus
ENSCSEG00000001953	rpusd2	87	67.961	ENSLBEG00000021571	rpusd2	92	68.216	Labrus_bergylta
ENSCSEG00000001953	rpusd2	78	59.170	ENSLACG00000017338	RPUSD2	99	59.170	Latimeria_chalumnae
ENSCSEG00000001953	rpusd2	78	65.563	ENSLOCG00000014755	rpusd2	92	65.539	Lepisosteus_oculatus
ENSCSEG00000001953	rpusd2	89	53.282	ENSLAFG00000015588	RPUSD2	94	53.282	Loxodonta_africana
ENSCSEG00000001953	rpusd2	83	55.741	ENSMFAG00000045062	RPUSD2	84	55.741	Macaca_fascicularis
ENSCSEG00000001953	rpusd2	84	55.464	ENSMMUG00000001483	RPUSD2	85	55.464	Macaca_mulatta
ENSCSEG00000001953	rpusd2	84	48.566	ENSMNEG00000041429	RPUSD2	85	48.566	Macaca_nemestrina
ENSCSEG00000001953	rpusd2	62	54.213	ENSMLEG00000036551	RPUSD2	81	54.213	Mandrillus_leucophaeus
ENSCSEG00000001953	rpusd2	99	62.664	ENSMAMG00000001077	rpusd2	99	62.664	Mastacembelus_armatus
ENSCSEG00000001953	rpusd2	86	70.736	ENSMZEG00005006947	rpusd2	99	69.829	Maylandia_zebra
ENSCSEG00000001953	rpusd2	79	59.737	ENSMGAG00000003058	RPUSD2	97	59.737	Meleagris_gallopavo
ENSCSEG00000001953	rpusd2	84	55.670	ENSMAUG00000020467	Rpusd2	83	55.670	Mesocricetus_auratus
ENSCSEG00000001953	rpusd2	84	55.215	ENSMICG00000028637	RPUSD2	86	55.215	Microcebus_murinus
ENSCSEG00000001953	rpusd2	84	56.008	ENSMOCG00000020061	Rpusd2	83	56.008	Microtus_ochrogaster
ENSCSEG00000001953	rpusd2	85	72.125	ENSMMOG00000012020	rpusd2	99	65.552	Mola_mola
ENSCSEG00000001953	rpusd2	84	53.939	ENSMODG00000000300	RPUSD2	87	53.939	Monodelphis_domestica
ENSCSEG00000001953	rpusd2	97	62.479	ENSMALG00000010024	rpusd2	98	62.479	Monopterus_albus
ENSCSEG00000001953	rpusd2	81	57.962	MGP_CAROLIEiJ_G0024130	Rpusd2	80	57.962	Mus_caroli
ENSCSEG00000001953	rpusd2	83	56.250	ENSMUSG00000027324	Rpusd2	82	56.250	Mus_musculus
ENSCSEG00000001953	rpusd2	86	55.467	MGP_PahariEiJ_G0025573	Rpusd2	86	55.467	Mus_pahari
ENSCSEG00000001953	rpusd2	83	56.250	MGP_SPRETEiJ_G0025046	Rpusd2	83	56.250	Mus_spretus
ENSCSEG00000001953	rpusd2	88	53.204	ENSMPUG00000008517	RPUSD2	88	53.204	Mustela_putorius_furo
ENSCSEG00000001953	rpusd2	84	55.758	ENSMLUG00000007971	RPUSD2	93	55.758	Myotis_lucifugus
ENSCSEG00000001953	rpusd2	85	56.478	ENSNGAG00000014126	Rpusd2	86	56.478	Nannospalax_galili
ENSCSEG00000001953	rpusd2	91	69.346	ENSNBRG00000010070	rpusd2	92	69.346	Neolamprologus_brichardi
ENSCSEG00000001953	rpusd2	83	55.115	ENSNLEG00000035735	RPUSD2	84	55.115	Nomascus_leucogenys
ENSCSEG00000001953	rpusd2	83	57.113	ENSMEUG00000008500	RPUSD2	88	57.113	Notamacropus_eugenii
ENSCSEG00000001953	rpusd2	84	56.701	ENSOPRG00000014177	-	86	56.701	Ochotona_princeps
ENSCSEG00000001953	rpusd2	84	55.943	ENSODEG00000017193	RPUSD2	87	55.943	Octodon_degus
ENSCSEG00000001953	rpusd2	86	70.623	ENSONIG00000020102	rpusd2	98	70.623	Oreochromis_niloticus
ENSCSEG00000001953	rpusd2	84	57.114	ENSOCUG00000015745	RPUSD2	83	57.114	Oryctolagus_cuniculus
ENSCSEG00000001953	rpusd2	83	69.405	ENSORLG00000015516	rpusd2	86	69.405	Oryzias_latipes
ENSCSEG00000001953	rpusd2	83	69.772	ENSORLG00020010533	rpusd2	86	69.772	Oryzias_latipes_hni
ENSCSEG00000001953	rpusd2	85	67.470	ENSORLG00015009206	rpusd2	88	67.470	Oryzias_latipes_hsok
ENSCSEG00000001953	rpusd2	97	65.536	ENSOMEG00000007355	rpusd2	89	65.536	Oryzias_melastigma
ENSCSEG00000001953	rpusd2	84	55.123	ENSOGAG00000004867	RPUSD2	90	55.123	Otolemur_garnettii
ENSCSEG00000001953	rpusd2	81	56.263	ENSOARG00000020235	RPUSD2	86	55.417	Ovis_aries
ENSCSEG00000001953	rpusd2	84	54.845	ENSPPAG00000032874	RPUSD2	85	54.845	Pan_paniscus
ENSCSEG00000001953	rpusd2	84	54.303	ENSPPRG00000010446	RPUSD2	86	54.303	Panthera_pardus
ENSCSEG00000001953	rpusd2	84	54.303	ENSPTIG00000013316	RPUSD2	86	54.303	Panthera_tigris_altaica
ENSCSEG00000001953	rpusd2	84	54.845	ENSPTRG00000006924	RPUSD2	85	54.845	Pan_troglodytes
ENSCSEG00000001953	rpusd2	84	55.464	ENSPANG00000019339	RPUSD2	85	55.464	Papio_anubis
ENSCSEG00000001953	rpusd2	96	56.121	ENSPKIG00000023017	rpusd2	93	56.280	Paramormyrops_kingsleyae
ENSCSEG00000001953	rpusd2	62	58.889	ENSPSIG00000012680	RPUSD2	100	58.889	Pelodiscus_sinensis
ENSCSEG00000001953	rpusd2	74	78.307	ENSPMGG00000018165	rpusd2	85	78.307	Periophthalmus_magnuspinnatus
ENSCSEG00000001953	rpusd2	81	58.174	ENSPEMG00000012878	Rpusd2	92	54.545	Peromyscus_maniculatus_bairdii
ENSCSEG00000001953	rpusd2	81	56.716	ENSPCIG00000023199	RPUSD2	82	56.716	Phascolarctos_cinereus
ENSCSEG00000001953	rpusd2	91	67.978	ENSPFOG00000006829	rpusd2	90	67.978	Poecilia_formosa
ENSCSEG00000001953	rpusd2	84	71.951	ENSPLAG00000022914	rpusd2	97	71.951	Poecilia_latipinna
ENSCSEG00000001953	rpusd2	91	67.978	ENSPMEG00000009835	rpusd2	99	71.400	Poecilia_mexicana
ENSCSEG00000001953	rpusd2	84	71.748	ENSPREG00000016441	rpusd2	83	71.748	Poecilia_reticulata
ENSCSEG00000001953	rpusd2	83	54.865	ENSPPYG00000006355	RPUSD2	85	54.865	Pongo_abelii
ENSCSEG00000001953	rpusd2	84	55.123	ENSPCOG00000028019	RPUSD2	86	55.123	Propithecus_coquereli
ENSCSEG00000001953	rpusd2	83	55.556	ENSPVAG00000001837	RPUSD2	85	55.556	Pteropus_vampyrus
ENSCSEG00000001953	rpusd2	85	71.919	ENSPNYG00000021507	rpusd2	94	71.919	Pundamilia_nyererei
ENSCSEG00000001953	rpusd2	84	56.033	ENSRNOG00000010528	LOC100911166	83	56.033	Rattus_norvegicus
ENSCSEG00000001953	rpusd2	84	56.033	ENSRNOG00000046797	Rpusd2	83	56.033	Rattus_norvegicus
ENSCSEG00000001953	rpusd2	84	55.464	ENSRBIG00000030813	RPUSD2	85	55.464	Rhinopithecus_bieti
ENSCSEG00000001953	rpusd2	84	55.258	ENSRROG00000026664	RPUSD2	85	55.258	Rhinopithecus_roxellana
ENSCSEG00000001953	rpusd2	51	45.246	YDL036C	-	65	45.246	Saccharomyces_cerevisiae
ENSCSEG00000001953	rpusd2	84	55.144	ENSSBOG00000035031	RPUSD2	85	55.258	Saimiri_boliviensis_boliviensis
ENSCSEG00000001953	rpusd2	62	55.432	ENSSHAG00000015108	RPUSD2	91	55.432	Sarcophilus_harrisii
ENSCSEG00000001953	rpusd2	92	53.707	ENSSFOG00015019057	rpusd2	91	54.036	Scleropages_formosus
ENSCSEG00000001953	rpusd2	91	70.055	ENSSMAG00000000903	rpusd2	100	70.489	Scophthalmus_maximus
ENSCSEG00000001953	rpusd2	99	66.612	ENSSDUG00000019139	rpusd2	100	66.612	Seriola_dumerili
ENSCSEG00000001953	rpusd2	99	66.446	ENSSLDG00000005938	rpusd2	100	66.446	Seriola_lalandi_dorsalis
ENSCSEG00000001953	rpusd2	85	56.024	ENSSARG00000002792	RPUSD2	86	56.024	Sorex_araneus
ENSCSEG00000001953	rpusd2	81	57.023	ENSSPUG00000001206	RPUSD2	90	57.023	Sphenodon_punctatus
ENSCSEG00000001953	rpusd2	99	64.576	ENSSPAG00000003578	rpusd2	100	64.576	Stegastes_partitus
ENSCSEG00000001953	rpusd2	84	55.144	ENSSSCG00000036700	RPUSD2	84	55.144	Sus_scrofa
ENSCSEG00000001953	rpusd2	90	64.193	ENSTRUG00000025880	rpusd2	99	65.121	Takifugu_rubripes
ENSCSEG00000001953	rpusd2	87	68.849	ENSTNIG00000017329	rpusd2	99	69.048	Tetraodon_nigroviridis
ENSCSEG00000001953	rpusd2	84	48.770	ENSTBEG00000007933	RPUSD2	86	48.770	Tupaia_belangeri
ENSCSEG00000001953	rpusd2	84	55.828	ENSTTRG00000010585	RPUSD2	86	55.828	Tursiops_truncatus
ENSCSEG00000001953	rpusd2	83	55.649	ENSUAMG00000001470	RPUSD2	90	55.649	Ursus_americanus
ENSCSEG00000001953	rpusd2	83	55.439	ENSUMAG00000012487	RPUSD2	74	55.439	Ursus_maritimus
ENSCSEG00000001953	rpusd2	84	55.397	ENSVPAG00000003844	RPUSD2	86	55.397	Vicugna_pacos
ENSCSEG00000001953	rpusd2	83	55.021	ENSVVUG00000026590	RPUSD2	83	55.021	Vulpes_vulpes
ENSCSEG00000001953	rpusd2	81	56.962	ENSXETG00000015973	rpusd2	98	56.962	Xenopus_tropicalis
ENSCSEG00000001953	rpusd2	87	68.421	ENSXMAG00000021821	rpusd2	97	70.101	Xiphophorus_maculatus