EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000001956 (Gene tree)
Gene ID
103378756
Gene Symbol
CPSF7
Alias
CFIM59|FLJ12529
Full Name
cleavage and polyadenylation specificity factor subunit 7
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
5234 bases
Position
chr5:5212053-5217286
Accession
103378756
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000002969RRM_1PF00076.222.7e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000003013CPSF7-2012917XM_008310073ENSCSEP00000002969419 (aa)XP_008308295UPI0007DC9CA8
Gene Model
Click here to download ENSCSEG00000001956's gene model file
Pathways
Pathway IDPathway NameSource
csem03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001956's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000001956CPSF75744.056ENSCSEG00000008967cpsf66134.826
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000001956CPSF77639.276ENSG00000149532CPSF79039.394Homo_sapiens
ENSCSEG00000001956CPSF75746.154ENSG00000111605CPSF66934.337Homo_sapiens
ENSCSEG00000001956CPSF75353.535ENSAMEG00000016595CPSF77041.096Ailuropoda_melanoleuca
ENSCSEG00000001956CPSF75746.154ENSAMEG00000011781CPSF65043.299Ailuropoda_melanoleuca
ENSCSEG00000001956CPSF75744.755ENSACIG00000018413cpsf65040.206Amphilophus_citrinellus
ENSCSEG00000001956CPSF78358.808ENSAOCG00000012357CPSF79951.566Amphiprion_ocellaris
ENSCSEG00000001956CPSF77540.206ENSAOCG00000017865cpsf65240.206Amphiprion_ocellaris
ENSCSEG00000001956CPSF78358.537ENSAPEG00000015375CPSF79951.357Amphiprion_percula
ENSCSEG00000001956CPSF75744.755ENSACAG00000004381CPSF65243.299Anolis_carolinensis
ENSCSEG00000001956CPSF75746.154ENSANAG00000019240CPSF66733.221Aotus_nancymaae
ENSCSEG00000001956CPSF77635.821ENSANAG00000024635CPSF78037.629Aotus_nancymaae
ENSCSEG00000001956CPSF77537.696ENSAMXG00000016745CPSF68032.353Astyanax_mexicanus
ENSCSEG00000001956CPSF75746.154ENSBTAG00000007323CPSF65143.299Bos_taurus
ENSCSEG00000001956CPSF77638.384ENSBTAG00000015263CPSF78040.314Bos_taurus
ENSCSEG00000001956CPSF75747.552ENSCJAG00000001798CPSF67035.030Callithrix_jacchus
ENSCSEG00000001956CPSF77639.276ENSCJAG00000019282CPSF78041.287Callithrix_jacchus
ENSCSEG00000001956CPSF76640.698ENSCAFG00000016152CPSF78039.523Canis_familiaris
ENSCSEG00000001956CPSF75746.154ENSCAFG00000000424CPSF67533.531Canis_familiaris
ENSCSEG00000001956CPSF76640.698ENSCAFG00020012753CPSF78039.523Canis_lupus_dingo
ENSCSEG00000001956CPSF75746.154ENSCAFG00020016950CPSF65143.299Canis_lupus_dingo
ENSCSEG00000001956CPSF75746.154ENSCHIG00000010792CPSF65143.299Capra_hircus
ENSCSEG00000001956CPSF77638.384ENSCHIG00000014655CPSF78040.314Capra_hircus
ENSCSEG00000001956CPSF77638.636ENSTSYG00000010138-8040.576Carlito_syrichta
ENSCSEG00000001956CPSF75747.552ENSTSYG00000008591CPSF67235.030Carlito_syrichta
ENSCSEG00000001956CPSF77638.384ENSCAPG00000006384CPSF78340.314Cavia_aperea
ENSCSEG00000001956CPSF77638.384ENSCPOG00000009980CPSF78040.314Cavia_porcellus
ENSCSEG00000001956CPSF75746.154ENSCPOG00000015201CPSF65143.299Cavia_porcellus
ENSCSEG00000001956CPSF77639.031ENSCCAG00000032367CPSF78040.314Cebus_capucinus
ENSCSEG00000001956CPSF75747.552ENSCCAG00000028149CPSF66935.030Cebus_capucinus
ENSCSEG00000001956CPSF77639.276ENSCATG00000042801CPSF78140.314Cercocebus_atys
ENSCSEG00000001956CPSF76943.299ENSCATG00000039288CPSF66935.366Cercocebus_atys
ENSCSEG00000001956CPSF75747.552ENSCLAG00000010149CPSF65343.299Chinchilla_lanigera
ENSCSEG00000001956CPSF77638.636ENSCLAG00000003174CPSF78040.576Chinchilla_lanigera
ENSCSEG00000001956CPSF77639.276ENSCSAG00000006414CPSF78041.287Chlorocebus_sabaeus
ENSCSEG00000001956CPSF77943.299ENSCPBG00000013322CPSF65143.299Chrysemys_picta_bellii
ENSCSEG00000001956CPSF77636.628ENSCSAVG00000000161-8537.705Ciona_savignyi
ENSCSEG00000001956CPSF75746.154ENSCANG00000037294CPSF67035.366Colobus_angolensis_palliatus
ENSCSEG00000001956CPSF75747.552ENSCGRG00001018082Cpsf65243.299Cricetulus_griseus_chok1gshd
ENSCSEG00000001956CPSF78037.530ENSCGRG00001020382Cpsf78040.314Cricetulus_griseus_chok1gshd
ENSCSEG00000001956CPSF75747.552ENSCGRG00000016909Cpsf65343.299Cricetulus_griseus_crigri
ENSCSEG00000001956CPSF78038.404ENSCGRG00000017954Cpsf78041.444Cricetulus_griseus_crigri
ENSCSEG00000001956CPSF76743.972ENSCVAG00000014857cpsf68032.361Cyprinodon_variegatus
ENSCSEG00000001956CPSF78456.117ENSCVAG00000007392CPSF78753.713Cyprinodon_variegatus
ENSCSEG00000001956CPSF76840.722ENSDARG00000018618cpsf66037.989Danio_rerio
ENSCSEG00000001956CPSF77638.384ENSDNOG00000018517CPSF78040.314Dasypus_novemcinctus
ENSCSEG00000001956CPSF75747.552ENSDNOG00000015292CPSF65143.299Dasypus_novemcinctus
ENSCSEG00000001956CPSF75747.552ENSDORG00000002950Cpsf65243.299Dipodomys_ordii
ENSCSEG00000001956CPSF76641.317ENSETEG00000003765CPSF78040.052Echinops_telfairi
ENSCSEG00000001956CPSF76338.144ENSEBUG00000003540cpsf68336.726Eptatretus_burgeri
ENSCSEG00000001956CPSF77638.636ENSEASG00005008196CPSF78040.576Equus_asinus_asinus
ENSCSEG00000001956CPSF75746.154ENSEASG00005008066CPSF65143.299Equus_asinus_asinus
ENSCSEG00000001956CPSF76645.583ENSECAG00000018521CPSF76445.357Equus_caballus
ENSCSEG00000001956CPSF75746.154ENSECAG00000015988CPSF65143.299Equus_caballus
ENSCSEG00000001956CPSF75746.154ENSEEUG00000015039CPSF65041.237Erinaceus_europaeus
ENSCSEG00000001956CPSF76645.583ENSFCAG00000013677CPSF78039.523Felis_catus
ENSCSEG00000001956CPSF75746.154ENSFCAG00000002855CPSF65143.299Felis_catus
ENSCSEG00000001956CPSF77943.299ENSFALG00000010157CPSF65343.299Ficedula_albicollis
ENSCSEG00000001956CPSF76644.625ENSFALG00000011927CPSF76845.033Ficedula_albicollis
ENSCSEG00000001956CPSF76641.056ENSFDAG00000003919CPSF77043.939Fukomys_damarensis
ENSCSEG00000001956CPSF75746.154ENSFDAG00000002281CPSF65143.299Fukomys_damarensis
ENSCSEG00000001956CPSF77739.737ENSGALG00000040962CPSF76942.432Gallus_gallus
ENSCSEG00000001956CPSF77943.299ENSGAGG00000010228CPSF65243.299Gopherus_agassizii
ENSCSEG00000001956CPSF75747.552ENSGGOG00000008211CPSF66935.366Gorilla_gorilla
ENSCSEG00000001956CPSF77540.206ENSHBUG00000005998cpsf65240.206Haplochromis_burtoni
ENSCSEG00000001956CPSF77639.276ENSHGLG00000019090-8041.287Heterocephalus_glaber_female
ENSCSEG00000001956CPSF75746.154ENSHGLG00000000792CPSF65143.299Heterocephalus_glaber_female
ENSCSEG00000001956CPSF75746.154ENSHGLG00100013861CPSF65343.299Heterocephalus_glaber_male
ENSCSEG00000001956CPSF76642.121ENSHGLG00100013933-6945.253Heterocephalus_glaber_male
ENSCSEG00000001956CPSF77745.695ENSHCOG00000014555cpsf65341.237Hippocampus_comes
ENSCSEG00000001956CPSF77638.636ENSSTOG00000007708CPSF78040.576Ictidomys_tridecemlineatus
ENSCSEG00000001956CPSF75747.552ENSSTOG00000014133CPSF65343.299Ictidomys_tridecemlineatus
ENSCSEG00000001956CPSF75747.552ENSJJAG00000014647Cpsf65343.299Jaculus_jaculus
ENSCSEG00000001956CPSF78038.614ENSJJAG00000019390Cpsf78041.555Jaculus_jaculus
ENSCSEG00000001956CPSF75745.455ENSKMAG00000014794cpsf65240.206Kryptolebias_marmoratus
ENSCSEG00000001956CPSF79653.139ENSLBEG00000000947CPSF79458.005Labrus_bergylta
ENSCSEG00000001956CPSF75745.455ENSLBEG00000015762cpsf65040.206Labrus_bergylta
ENSCSEG00000001956CPSF78435.849ENSLACG00000005542CPSF78138.032Latimeria_chalumnae
ENSCSEG00000001956CPSF75747.552ENSLACG00000008625CPSF65141.237Latimeria_chalumnae
ENSCSEG00000001956CPSF75746.154ENSLAFG00000030413CPSF68131.969Loxodonta_africana
ENSCSEG00000001956CPSF77638.636ENSLAFG00000032084CPSF78040.838Loxodonta_africana
ENSCSEG00000001956CPSF75747.552ENSMFAG00000045318CPSF66935.366Macaca_fascicularis
ENSCSEG00000001956CPSF77638.384ENSMFAG00000001401CPSF78140.314Macaca_fascicularis
ENSCSEG00000001956CPSF77543.299ENSMMUG00000002921CPSF66934.718Macaca_mulatta
ENSCSEG00000001956CPSF77639.276ENSMMUG00000015280CPSF78041.287Macaca_mulatta
ENSCSEG00000001956CPSF75747.552ENSMNEG00000036311CPSF66935.366Macaca_nemestrina
ENSCSEG00000001956CPSF77639.276ENSMNEG00000029585CPSF78140.314Macaca_nemestrina
ENSCSEG00000001956CPSF77638.384ENSMLEG00000031269CPSF78140.314Mandrillus_leucophaeus
ENSCSEG00000001956CPSF75746.154ENSMLEG00000003957CPSF67035.366Mandrillus_leucophaeus
ENSCSEG00000001956CPSF77540.206ENSMAMG00000010385cpsf65240.206Mastacembelus_armatus
ENSCSEG00000001956CPSF77540.206ENSMZEG00005007975cpsf65240.206Maylandia_zebra
ENSCSEG00000001956CPSF75747.552ENSMGAG00000010552CPSF67330.334Meleagris_gallopavo
ENSCSEG00000001956CPSF77942.384ENSMGAG00000004876CPSF76742.995Meleagris_gallopavo
ENSCSEG00000001956CPSF75746.154ENSMAUG00000013240Cpsf65143.299Mesocricetus_auratus
ENSCSEG00000001956CPSF78037.530ENSMAUG00000013020Cpsf78040.314Mesocricetus_auratus
ENSCSEG00000001956CPSF75747.552ENSMICG00000007385-6935.366Microcebus_murinus
ENSCSEG00000001956CPSF77637.852ENSMICG00000013788CPSF78039.788Microcebus_murinus
ENSCSEG00000001956CPSF76640.407ENSMOCG00000000072Cpsf78040.052Microtus_ochrogaster
ENSCSEG00000001956CPSF75747.552ENSMOCG00000013982Cpsf65143.299Microtus_ochrogaster
ENSCSEG00000001956CPSF75746.154ENSMODG00000007123CPSF65143.299Monodelphis_domestica
ENSCSEG00000001956CPSF75747.552MGP_CAROLIEiJ_G0015834Cpsf65143.299Mus_caroli
ENSCSEG00000001956CPSF76640.407MGP_CAROLIEiJ_G0022690Cpsf78040.052Mus_caroli
ENSCSEG00000001956CPSF75747.552ENSMUSG00000055531Cpsf65143.299Mus_musculus
ENSCSEG00000001956CPSF76640.407ENSMUSG00000034820Cpsf78040.052Mus_musculus
ENSCSEG00000001956CPSF76640.407MGP_PahariEiJ_G0014184Cpsf78040.052Mus_pahari
ENSCSEG00000001956CPSF76640.407MGP_SPRETEiJ_G0023604Cpsf78040.052Mus_spretus
ENSCSEG00000001956CPSF75747.552MGP_SPRETEiJ_G0016657Cpsf65143.299Mus_spretus
ENSCSEG00000001956CPSF76640.407ENSMPUG00000014163CPSF77939.257Mustela_putorius_furo
ENSCSEG00000001956CPSF75743.357ENSMPUG00000017502CPSF65043.299Mustela_putorius_furo
ENSCSEG00000001956CPSF76536.331ENSMLUG00000028728-6635.069Myotis_lucifugus
ENSCSEG00000001956CPSF75743.357ENSMLUG00000004172-5043.299Myotis_lucifugus
ENSCSEG00000001956CPSF77639.276ENSMLUG00000013278CPSF78041.019Myotis_lucifugus
ENSCSEG00000001956CPSF78037.772ENSNGAG00000005031Cpsf78040.576Nannospalax_galili
ENSCSEG00000001956CPSF75747.552ENSNGAG00000015901Cpsf65143.299Nannospalax_galili
ENSCSEG00000001956CPSF77540.206ENSNBRG00000004089cpsf65240.206Neolamprologus_brichardi
ENSCSEG00000001956CPSF75747.552ENSNLEG00000003798CPSF66935.366Nomascus_leucogenys
ENSCSEG00000001956CPSF77638.384ENSNLEG00000002529CPSF77340.420Nomascus_leucogenys
ENSCSEG00000001956CPSF76641.194ENSMEUG00000002261CPSF77043.030Notamacropus_eugenii
ENSCSEG00000001956CPSF75746.154ENSOPRG00000005199CPSF65043.299Ochotona_princeps
ENSCSEG00000001956CPSF76349.275ENSODEG00000007109-7432.890Octodon_degus
ENSCSEG00000001956CPSF75747.552ENSODEG00000004418-7035.048Octodon_degus
ENSCSEG00000001956CPSF75746.853ENSODEG00000018399-5142.268Octodon_degus
ENSCSEG00000001956CPSF77637.845ENSODEG00000002610CPSF78040.000Octodon_degus
ENSCSEG00000001956CPSF77540.206ENSONIG00000011702cpsf65240.206Oreochromis_niloticus
ENSCSEG00000001956CPSF77638.384ENSOCUG00000024726CPSF78040.682Oryctolagus_cuniculus
ENSCSEG00000001956CPSF76939.594ENSORLG00000013893cpsf66235.500Oryzias_latipes
ENSCSEG00000001956CPSF75249.558ENSORLG00020012657CPSF77853.889Oryzias_latipes_hni
ENSCSEG00000001956CPSF76939.594ENSORLG00020016593cpsf66235.500Oryzias_latipes_hni
ENSCSEG00000001956CPSF76939.594ENSORLG00015015558cpsf66235.500Oryzias_latipes_hsok
ENSCSEG00000001956CPSF75743.972ENSOMEG00000009425cpsf66235.500Oryzias_melastigma
ENSCSEG00000001956CPSF79852.747ENSOMEG00000000539CPSF78455.844Oryzias_melastigma
ENSCSEG00000001956CPSF75743.357ENSOGAG00000031988CPSF65243.299Otolemur_garnettii
ENSCSEG00000001956CPSF77638.636ENSOGAG00000027958CPSF77440.420Otolemur_garnettii
ENSCSEG00000001956CPSF75747.552ENSOARG00000020532CPSF65343.299Ovis_aries
ENSCSEG00000001956CPSF75353.000ENSOARG00000012937CPSF78233.796Ovis_aries
ENSCSEG00000001956CPSF77638.384ENSPPAG00000028232CPSF78240.314Pan_paniscus
ENSCSEG00000001956CPSF76641.056ENSPPRG00000008538CPSF78038.727Panthera_pardus
ENSCSEG00000001956CPSF75746.154ENSPPRG00000021620CPSF65143.299Panthera_pardus
ENSCSEG00000001956CPSF75746.154ENSPTIG00000004079CPSF65743.299Panthera_tigris_altaica
ENSCSEG00000001956CPSF76640.698ENSPTIG00000021699CPSF78039.523Panthera_tigris_altaica
ENSCSEG00000001956CPSF75747.552ENSPTRG00000005205CPSF66935.366Pan_troglodytes
ENSCSEG00000001956CPSF77638.384ENSPTRG00000003742CPSF78240.314Pan_troglodytes
ENSCSEG00000001956CPSF77638.384ENSPANG00000006037CPSF78140.314Papio_anubis
ENSCSEG00000001956CPSF75747.552ENSPANG00000011641CPSF66935.366Papio_anubis
ENSCSEG00000001956CPSF75744.330ENSPKIG00000003081-5144.330Paramormyrops_kingsleyae
ENSCSEG00000001956CPSF75744.755ENSPKIG00000022613CPSF65139.779Paramormyrops_kingsleyae
ENSCSEG00000001956CPSF77943.299ENSPSIG00000016360CPSF68036.111Pelodiscus_sinensis
ENSCSEG00000001956CPSF75747.552ENSPEMG00000007973Cpsf65343.299Peromyscus_maniculatus_bairdii
ENSCSEG00000001956CPSF78037.530ENSPEMG00000012648Cpsf78041.287Peromyscus_maniculatus_bairdii
ENSCSEG00000001956CPSF76245.000ENSPMAG00000000657cpsf65240.816Petromyzon_marinus
ENSCSEG00000001956CPSF76645.486ENSPCIG00000002551CPSF77141.908Phascolarctos_cinereus
ENSCSEG00000001956CPSF75746.154ENSPCIG00000019063CPSF65143.299Phascolarctos_cinereus
ENSCSEG00000001956CPSF76743.972ENSPFOG00000006990cpsf66933.333Poecilia_formosa
ENSCSEG00000001956CPSF75744.366ENSPLAG00000005715cpsf67132.055Poecilia_latipinna
ENSCSEG00000001956CPSF75743.972ENSPMEG00000001353cpsf65039.175Poecilia_mexicana
ENSCSEG00000001956CPSF75743.972ENSPREG00000004417cpsf65039.175Poecilia_reticulata
ENSCSEG00000001956CPSF75746.154ENSPPYG00000004756CPSF65143.299Pongo_abelii
ENSCSEG00000001956CPSF77638.384ENSPPYG00000003188CPSF78040.314Pongo_abelii
ENSCSEG00000001956CPSF77637.852ENSPCOG00000011976CPSF78039.788Propithecus_coquereli
ENSCSEG00000001956CPSF75747.552ENSPCOG00000024384CPSF66935.030Propithecus_coquereli
ENSCSEG00000001956CPSF77638.636ENSPVAG00000010675CPSF78040.576Pteropus_vampyrus
ENSCSEG00000001956CPSF76846.099ENSPNAG00000024098CPSF66235.385Pygocentrus_nattereri
ENSCSEG00000001956CPSF77945.833ENSPNAG00000015073CPSF77646.839Pygocentrus_nattereri
ENSCSEG00000001956CPSF75746.154ENSRNOG00000005927Cpsf65143.299Rattus_norvegicus
ENSCSEG00000001956CPSF76641.493ENSRNOG00000020668Cpsf76943.925Rattus_norvegicus
ENSCSEG00000001956CPSF77639.276ENSRBIG00000031429CPSF78140.314Rhinopithecus_bieti
ENSCSEG00000001956CPSF75747.552ENSRBIG00000042827CPSF66935.366Rhinopithecus_bieti
ENSCSEG00000001956CPSF77639.031ENSRROG00000045009CPSF78140.314Rhinopithecus_roxellana
ENSCSEG00000001956CPSF75746.154ENSRROG00000042758CPSF66935.366Rhinopithecus_roxellana
ENSCSEG00000001956CPSF77638.384ENSSBOG00000018431CPSF78040.314Saimiri_boliviensis_boliviensis
ENSCSEG00000001956CPSF75747.552ENSSBOG00000010652CPSF67135.366Saimiri_boliviensis_boliviensis
ENSCSEG00000001956CPSF76641.791ENSSHAG00000011964CPSF77043.636Sarcophilus_harrisii
ENSCSEG00000001956CPSF75743.299ENSSHAG00000006635CPSF65143.299Sarcophilus_harrisii
ENSCSEG00000001956CPSF75746.809ENSSFOG00015015803CPSF66339.130Scleropages_formosus
ENSCSEG00000001956CPSF78445.932ENSSFOG00015010288cpsf77749.123Scleropages_formosus
ENSCSEG00000001956CPSF77540.206ENSSDUG00000005024cpsf65240.206Seriola_dumerili
ENSCSEG00000001956CPSF77540.206ENSSLDG00000009042cpsf65240.206Seriola_lalandi_dorsalis
ENSCSEG00000001956CPSF75744.056ENSSPAG00000013906cpsf65240.206Stegastes_partitus
ENSCSEG00000001956CPSF77638.636ENSSSCG00000013083CPSF78040.576Sus_scrofa
ENSCSEG00000001956CPSF75746.154ENSSSCG00000038031CPSF65343.299Sus_scrofa
ENSCSEG00000001956CPSF75743.972ENSTRUG00000016461cpsf66138.830Takifugu_rubripes
ENSCSEG00000001956CPSF77638.636ENSTTRG00000011085CPSF78340.682Tursiops_truncatus
ENSCSEG00000001956CPSF76640.698ENSUAMG00000017809CPSF78039.523Ursus_americanus
ENSCSEG00000001956CPSF75746.154ENSUAMG00000023492CPSF65743.299Ursus_americanus
ENSCSEG00000001956CPSF76641.791ENSUMAG00000011825CPSF78040.489Ursus_maritimus
ENSCSEG00000001956CPSF75746.154ENSUMAG00000020779CPSF67931.405Ursus_maritimus
ENSCSEG00000001956CPSF75746.154ENSVPAG00000008469CPSF65043.299Vicugna_pacos
ENSCSEG00000001956CPSF76644.178ENSVVUG00000004939CPSF76543.945Vulpes_vulpes
ENSCSEG00000001956CPSF75746.154ENSVVUG00000010156-5343.299Vulpes_vulpes
ENSCSEG00000001956CPSF75260.274ENSXETG00000006715cpsf78534.926Xenopus_tropicalis
ENSCSEG00000001956CPSF75743.972ENSXCOG00000013423cpsf65039.175Xiphophorus_couchianus

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