EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000001963 (Gene tree)
Gene ID: 103384619
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: la-related protein 4
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 11370 bases
Position: chr10:3395391-3406760
Accession: 103384619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000003000	La	PF05383.17	2.9e-17	1	1
ENSCSEP00000002987	La	PF05383.17	2.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003044	-	4751	XM_008318195	ENSCSEP00000003000	800 (aa)	XP_008316417	UPI0004950EEE
ENSCSET00000003031	-	4793	XM_008318194	ENSCSEP00000002987	814 (aa)	XP_008316416	UPI0004959D77

Gene Model

Click here to download ENSCSEG00000001963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000001963	larp4aa	61	54.309	ENSCSEG00000003240	larp4ab	98	48.456
ENSCSEG00000001963	larp4aa	53	42.888	ENSCSEG00000007342	LARP4B	67	42.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001963	larp4aa	82	62.803	ENSG00000161813	LARP4	99	62.903	Homo_sapiens
ENSCSEG00000001963	larp4aa	95	50.704	ENSAPOG00000021331	larp4ab	100	51.341	Acanthochromis_polyacanthus
ENSCSEG00000001963	larp4aa	100	85.172	ENSAPOG00000007142	larp4aa	100	85.049	Acanthochromis_polyacanthus
ENSCSEG00000001963	larp4aa	100	79.851	ENSACIG00000001198	larp4aa	100	79.602	Amphilophus_citrinellus
ENSCSEG00000001963	larp4aa	100	85.417	ENSAOCG00000002408	larp4aa	100	85.172	Amphiprion_ocellaris
ENSCSEG00000001963	larp4aa	95	50.190	ENSAOCG00000006387	larp4ab	100	50.695	Amphiprion_ocellaris
ENSCSEG00000001963	larp4aa	100	85.417	ENSAPEG00000019058	larp4aa	100	85.172	Amphiprion_percula
ENSCSEG00000001963	larp4aa	95	48.780	ENSATEG00000001018	larp4ab	100	48.267	Anabas_testudineus
ENSCSEG00000001963	larp4aa	100	83.042	ENSATEG00000020715	larp4aa	100	82.918	Anabas_testudineus
ENSCSEG00000001963	larp4aa	95	51.086	ENSAPLG00000013661	LARP4	99	51.720	Anas_platyrhynchos
ENSCSEG00000001963	larp4aa	95	49.937	ENSACAG00000017133	LARP4	96	49.362	Anolis_carolinensis
ENSCSEG00000001963	larp4aa	82	64.343	ENSANAG00000029342	LARP4	99	63.978	Aotus_nancymaae
ENSCSEG00000001963	larp4aa	100	81.364	ENSACLG00000002575	larp4aa	100	81.242	Astatotilapia_calliptera
ENSCSEG00000001963	larp4aa	100	64.755	ENSAMXG00000036493	larp4aa	100	65.591	Astyanax_mexicanus
ENSCSEG00000001963	larp4aa	95	52.823	ENSAMXG00000001515	larp4ab	95	57.322	Astyanax_mexicanus
ENSCSEG00000001963	larp4aa	82	61.795	ENSBTAG00000017164	LARP4	99	49.176	Bos_taurus
ENSCSEG00000001963	larp4aa	82	64.075	ENSCJAG00000021131	LARP4	99	63.710	Callithrix_jacchus
ENSCSEG00000001963	larp4aa	81	64.247	ENSCAFG00000008174	LARP4	99	48.477	Canis_familiaris
ENSCSEG00000001963	larp4aa	81	63.926	ENSCAFG00020014554	LARP4	99	61.053	Canis_lupus_dingo
ENSCSEG00000001963	larp4aa	82	63.881	ENSTSYG00000004342	LARP4	99	63.467	Carlito_syrichta
ENSCSEG00000001963	larp4aa	94	37.191	ENSCAPG00000012942	LARP4	95	46.739	Cavia_aperea
ENSCSEG00000001963	larp4aa	86	61.798	ENSCCAG00000024439	LARP4	99	63.395	Cebus_capucinus
ENSCSEG00000001963	larp4aa	81	60.847	ENSCATG00000044528	LARP4	99	47.395	Cercocebus_atys
ENSCSEG00000001963	larp4aa	82	63.588	ENSCLAG00000001829	LARP4	99	48.728	Chinchilla_lanigera
ENSCSEG00000001963	larp4aa	96	49.071	ENSCPBG00000019407	LARP4	90	49.874	Chrysemys_picta_bellii
ENSCSEG00000001963	larp4aa	95	45.153	ENSCANG00000033097	-	99	44.260	Colobus_angolensis_palliatus
ENSCSEG00000001963	larp4aa	82	63.881	ENSCANG00000029159	-	99	63.978	Colobus_angolensis_palliatus
ENSCSEG00000001963	larp4aa	83	65.333	ENSCGRG00001010818	Larp4	99	49.365	Cricetulus_griseus_chok1gshd
ENSCSEG00000001963	larp4aa	83	65.333	ENSCGRG00000009382	Larp4	100	49.365	Cricetulus_griseus_crigri
ENSCSEG00000001963	larp4aa	100	80.244	ENSCVAG00000005488	larp4aa	100	80.244	Cyprinodon_variegatus
ENSCSEG00000001963	larp4aa	99	63.659	ENSDARG00000078401	larp4aa	99	62.923	Danio_rerio
ENSCSEG00000001963	larp4aa	95	52.314	ENSDARG00000074979	larp4ab	83	83.673	Danio_rerio
ENSCSEG00000001963	larp4aa	81	62.069	ENSDNOG00000038525	LARP4	91	62.634	Dasypus_novemcinctus
ENSCSEG00000001963	larp4aa	84	58.961	ENSDORG00000004013	Larp4	99	47.208	Dipodomys_ordii
ENSCSEG00000001963	larp4aa	54	86.667	ENSETEG00000011683	LARP4	75	54.412	Echinops_telfairi
ENSCSEG00000001963	larp4aa	77	36.574	ENSEBUG00000010394	LARP4	95	36.210	Eptatretus_burgeri
ENSCSEG00000001963	larp4aa	64	40.145	ENSEBUG00000004426	LARP4	92	39.459	Eptatretus_burgeri
ENSCSEG00000001963	larp4aa	81	59.416	ENSEASG00005004356	LARP4	100	60.169	Equus_asinus_asinus
ENSCSEG00000001963	larp4aa	81	63.926	ENSECAG00000012479	LARP4	99	50.191	Equus_caballus
ENSCSEG00000001963	larp4aa	69	85.470	ENSEEUG00000000316	LARP4	57	85.470	Erinaceus_europaeus
ENSCSEG00000001963	larp4aa	94	50.449	ENSELUG00000018650	larp4ab	73	79.386	Esox_lucius
ENSCSEG00000001963	larp4aa	100	60.990	ENSELUG00000000395	larp4aa	100	60.749	Esox_lucius
ENSCSEG00000001963	larp4aa	83	64.230	ENSFCAG00000031897	LARP4	99	64.706	Felis_catus
ENSCSEG00000001963	larp4aa	80	50.601	ENSFALG00000002114	LARP4	95	51.045	Ficedula_albicollis
ENSCSEG00000001963	larp4aa	100	80.170	ENSFHEG00000004338	larp4aa	100	80.292	Fundulus_heteroclitus
ENSCSEG00000001963	larp4aa	95	45.063	ENSFHEG00000013854	larp4ab	99	44.955	Fundulus_heteroclitus
ENSCSEG00000001963	larp4aa	100	71.040	ENSGMOG00000008246	larp4aa	100	70.421	Gadus_morhua
ENSCSEG00000001963	larp4aa	90	49.933	ENSGALG00000042122	LARP4	92	51.004	Gallus_gallus
ENSCSEG00000001963	larp4aa	95	47.455	ENSGAFG00000021777	larp4ab	99	47.481	Gambusia_affinis
ENSCSEG00000001963	larp4aa	95	48.840	ENSGACG00000000680	larp4ab	99	51.528	Gasterosteus_aculeatus
ENSCSEG00000001963	larp4aa	100	78.358	ENSGACG00000008381	larp4aa	98	87.535	Gasterosteus_aculeatus
ENSCSEG00000001963	larp4aa	95	49.121	ENSGAGG00000006969	LARP4	99	49.499	Gopherus_agassizii
ENSCSEG00000001963	larp4aa	83	62.467	ENSGGOG00000015230	LARP4	95	61.049	Gorilla_gorilla
ENSCSEG00000001963	larp4aa	100	80.854	ENSHBUG00000023074	larp4aa	100	80.732	Haplochromis_burtoni
ENSCSEG00000001963	larp4aa	83	46.396	ENSHGLG00000013875	-	99	45.345	Heterocephalus_glaber_female
ENSCSEG00000001963	larp4aa	95	45.828	ENSHGLG00100011678	-	99	45.149	Heterocephalus_glaber_male
ENSCSEG00000001963	larp4aa	95	45.987	ENSHCOG00000020857	larp4ab	100	45.791	Hippocampus_comes
ENSCSEG00000001963	larp4aa	100	74.265	ENSHCOG00000015951	larp4aa	100	74.265	Hippocampus_comes
ENSCSEG00000001963	larp4aa	99	63.825	ENSIPUG00000007514	larp4aa	99	64.024	Ictalurus_punctatus
ENSCSEG00000001963	larp4aa	95	48.768	ENSIPUG00000021659	larp4ab	73	56.420	Ictalurus_punctatus
ENSCSEG00000001963	larp4aa	81	64.815	ENSSTOG00000003553	LARP4	92	64.815	Ictidomys_tridecemlineatus
ENSCSEG00000001963	larp4aa	95	47.964	ENSKMAG00000018556	larp4ab	100	48.101	Kryptolebias_marmoratus
ENSCSEG00000001963	larp4aa	100	81.028	ENSKMAG00000006800	larp4aa	100	80.539	Kryptolebias_marmoratus
ENSCSEG00000001963	larp4aa	95	48.219	ENSLBEG00000019306	larp4ab	100	48.465	Labrus_bergylta
ENSCSEG00000001963	larp4aa	97	83.580	ENSLBEG00000014537	larp4aa	97	83.028	Labrus_bergylta
ENSCSEG00000001963	larp4aa	95	50.750	ENSLACG00000019090	LARP4	99	50.563	Latimeria_chalumnae
ENSCSEG00000001963	larp4aa	100	59.636	ENSLOCG00000007113	larp4ab	100	59.831	Lepisosteus_oculatus
ENSCSEG00000001963	larp4aa	95	46.344	ENSLAFG00000005160	LARP4	76	74.800	Loxodonta_africana
ENSCSEG00000001963	larp4aa	83	63.517	ENSMFAG00000043681	LARP4	99	63.978	Macaca_fascicularis
ENSCSEG00000001963	larp4aa	82	63.881	ENSMMUG00000008172	LARP4	99	63.978	Macaca_mulatta
ENSCSEG00000001963	larp4aa	78	51.724	ENSMNEG00000037799	-	93	50.838	Macaca_nemestrina
ENSCSEG00000001963	larp4aa	73	71.575	ENSMNEG00000034602	LARP4	97	50.575	Macaca_nemestrina
ENSCSEG00000001963	larp4aa	82	63.881	ENSMLEG00000039661	LARP4	99	63.978	Mandrillus_leucophaeus
ENSCSEG00000001963	larp4aa	100	84.700	ENSMAMG00000011206	larp4aa	100	84.455	Mastacembelus_armatus
ENSCSEG00000001963	larp4aa	95	49.936	ENSMAMG00000002616	larp4ab	100	50.256	Mastacembelus_armatus
ENSCSEG00000001963	larp4aa	100	81.730	ENSMZEG00005001813	larp4aa	100	81.364	Maylandia_zebra
ENSCSEG00000001963	larp4aa	90	50.067	ENSMGAG00000010598	LARP4	92	50.604	Meleagris_gallopavo
ENSCSEG00000001963	larp4aa	81	63.380	ENSMICG00000030156	-	90	63.380	Microcebus_murinus
ENSCSEG00000001963	larp4aa	69	76.923	ENSMICG00000012388	-	97	85.256	Microcebus_murinus
ENSCSEG00000001963	larp4aa	95	46.554	ENSMMOG00000021861	larp4ab	92	58.475	Mola_mola
ENSCSEG00000001963	larp4aa	100	76.348	ENSMMOG00000004785	larp4aa	100	75.547	Mola_mola
ENSCSEG00000001963	larp4aa	72	66.355	MGP_CAROLIEiJ_G0020281	Larp4	86	66.250	Mus_caroli
ENSCSEG00000001963	larp4aa	82	64.973	ENSMUSG00000023025	Larp4	99	49.047	Mus_musculus
ENSCSEG00000001963	larp4aa	84	64.987	MGP_PahariEiJ_G0020284	Larp4	91	65.583	Mus_pahari
ENSCSEG00000001963	larp4aa	83	63.947	ENSMPUG00000008706	LARP4	96	49.233	Mustela_putorius_furo
ENSCSEG00000001963	larp4aa	81	63.395	ENSMLUG00000012513	-	99	48.718	Myotis_lucifugus
ENSCSEG00000001963	larp4aa	83	64.894	ENSNGAG00000001577	-	87	73.239	Nannospalax_galili
ENSCSEG00000001963	larp4aa	100	81.341	ENSNBRG00000011292	larp4aa	100	80.976	Neolamprologus_brichardi
ENSCSEG00000001963	larp4aa	83	62.467	ENSNLEG00000017798	LARP4	99	62.903	Nomascus_leucogenys
ENSCSEG00000001963	larp4aa	100	81.468	ENSONIG00000011895	larp4aa	100	81.343	Oreochromis_niloticus
ENSCSEG00000001963	larp4aa	95	47.051	ENSONIG00000019124	larp4ab	99	45.881	Oreochromis_niloticus
ENSCSEG00000001963	larp4aa	64	55.159	ENSOANG00000004373	LARP4	92	55.431	Ornithorhynchus_anatinus
ENSCSEG00000001963	larp4aa	95	48.228	ENSOCUG00000021417	-	99	48.925	Oryctolagus_cuniculus
ENSCSEG00000001963	larp4aa	95	48.925	ENSOCUG00000026872	-	99	49.306	Oryctolagus_cuniculus
ENSCSEG00000001963	larp4aa	100	76.499	ENSORLG00000006758	larp4aa	100	76.377	Oryzias_latipes
ENSCSEG00000001963	larp4aa	100	76.010	ENSORLG00020010258	larp4aa	100	75.765	Oryzias_latipes_hni
ENSCSEG00000001963	larp4aa	100	75.520	ENSORLG00015002292	larp4aa	100	75.275	Oryzias_latipes_hsok
ENSCSEG00000001963	larp4aa	100	73.464	ENSOMEG00000019749	larp4aa	96	84.181	Oryzias_melastigma
ENSCSEG00000001963	larp4aa	51	62.500	ENSOGAG00000001415	LARP4	99	54.080	Otolemur_garnettii
ENSCSEG00000001963	larp4aa	66	62.467	ENSPPAG00000035100	LARP4	99	61.049	Pan_paniscus
ENSCSEG00000001963	larp4aa	83	64.230	ENSPPRG00000004522	LARP4	99	64.706	Panthera_pardus
ENSCSEG00000001963	larp4aa	83	64.230	ENSPTIG00000015617	LARP4	99	64.706	Panthera_tigris_altaica
ENSCSEG00000001963	larp4aa	83	62.467	ENSPTRG00000004935	LARP4	99	62.634	Pan_troglodytes
ENSCSEG00000001963	larp4aa	82	63.612	ENSPANG00000022964	LARP4	99	63.710	Papio_anubis
ENSCSEG00000001963	larp4aa	99	59.206	ENSPKIG00000005950	larp4ab	99	59.551	Paramormyrops_kingsleyae
ENSCSEG00000001963	larp4aa	95	48.985	ENSPSIG00000015867	LARP4	99	49.494	Pelodiscus_sinensis
ENSCSEG00000001963	larp4aa	81	62.133	ENSPEMG00000018433	Larp4	98	49.222	Peromyscus_maniculatus_bairdii
ENSCSEG00000001963	larp4aa	52	58.468	ENSPMAG00000002788	LARP4	82	58.498	Petromyzon_marinus
ENSCSEG00000001963	larp4aa	96	49.553	ENSPCIG00000000384	LARP4	99	49.936	Phascolarctos_cinereus
ENSCSEG00000001963	larp4aa	100	81.151	ENSPFOG00000013148	larp4aa	100	81.151	Poecilia_formosa
ENSCSEG00000001963	larp4aa	95	48.531	ENSPFOG00000009764	larp4ab	99	47.903	Poecilia_formosa
ENSCSEG00000001963	larp4aa	100	80.697	ENSPLAG00000013626	larp4aa	100	80.697	Poecilia_latipinna
ENSCSEG00000001963	larp4aa	95	48.096	ENSPLAG00000008502	larp4ab	99	48.158	Poecilia_latipinna
ENSCSEG00000001963	larp4aa	100	81.151	ENSPMEG00000014271	larp4aa	100	81.028	Poecilia_mexicana
ENSCSEG00000001963	larp4aa	95	47.704	ENSPMEG00000002720	larp4ab	99	46.717	Poecilia_mexicana
ENSCSEG00000001963	larp4aa	100	81.421	ENSPREG00000022597	larp4aa	100	81.421	Poecilia_reticulata
ENSCSEG00000001963	larp4aa	53	62.827	ENSPPYG00000004512	-	99	56.405	Pongo_abelii
ENSCSEG00000001963	larp4aa	77	66.436	ENSPCAG00000003671	LARP4	85	66.436	Procavia_capensis
ENSCSEG00000001963	larp4aa	82	63.342	ENSPCOG00000026291	LARP4	99	63.670	Propithecus_coquereli
ENSCSEG00000001963	larp4aa	76	57.099	ENSPVAG00000016840	LARP4	83	57.099	Pteropus_vampyrus
ENSCSEG00000001963	larp4aa	100	81.364	ENSPNYG00000022265	larp4aa	100	81.242	Pundamilia_nyererei
ENSCSEG00000001963	larp4aa	97	63.354	ENSPNAG00000024770	larp4aa	99	63.727	Pygocentrus_nattereri
ENSCSEG00000001963	larp4aa	95	54.364	ENSPNAG00000014478	larp4ab	99	55.373	Pygocentrus_nattereri
ENSCSEG00000001963	larp4aa	68	63.881	ENSRBIG00000038857	-	93	64.384	Rhinopithecus_bieti
ENSCSEG00000001963	larp4aa	68	54.789	ENSRBIG00000036890	-	99	54.789	Rhinopithecus_bieti
ENSCSEG00000001963	larp4aa	83	57.105	ENSRROG00000025487	-	99	54.789	Rhinopithecus_roxellana
ENSCSEG00000001963	larp4aa	82	63.881	ENSRROG00000042764	-	99	63.978	Rhinopithecus_roxellana
ENSCSEG00000001963	larp4aa	83	62.663	ENSSBOG00000026650	LARP4	99	63.369	Saimiri_boliviensis_boliviensis
ENSCSEG00000001963	larp4aa	97	61.057	ENSSFOG00015014096	larp4ab	99	60.673	Scleropages_formosus
ENSCSEG00000001963	larp4aa	95	62.516	ENSSFOG00015003868	larp4aa	99	61.568	Scleropages_formosus
ENSCSEG00000001963	larp4aa	100	86.047	ENSSMAG00000019473	larp4aa	100	86.169	Scophthalmus_maximus
ENSCSEG00000001963	larp4aa	95	49.746	ENSSMAG00000002838	larp4ab	100	50.953	Scophthalmus_maximus
ENSCSEG00000001963	larp4aa	100	88.264	ENSSDUG00000010621	larp4aa	100	87.775	Seriola_dumerili
ENSCSEG00000001963	larp4aa	95	51.072	ENSSDUG00000006655	larp4ab	100	52.273	Seriola_dumerili
ENSCSEG00000001963	larp4aa	100	87.775	ENSSLDG00000004942	larp4aa	100	87.897	Seriola_lalandi_dorsalis
ENSCSEG00000001963	larp4aa	95	51.960	ENSSLDG00000001791	larp4ab	100	52.146	Seriola_lalandi_dorsalis
ENSCSEG00000001963	larp4aa	63	61.757	ENSSARG00000012469	LARP4	92	53.940	Sorex_araneus
ENSCSEG00000001963	larp4aa	90	48.016	ENSSPUG00000016552	LARP4	92	49.528	Sphenodon_punctatus
ENSCSEG00000001963	larp4aa	95	50.694	ENSSPAG00000002172	larp4ab	100	51.083	Stegastes_partitus
ENSCSEG00000001963	larp4aa	100	78.501	ENSSPAG00000007222	larp4aa	94	89.051	Stegastes_partitus
ENSCSEG00000001963	larp4aa	83	63.255	ENSSSCG00000028516	LARP4	91	66.772	Sus_scrofa
ENSCSEG00000001963	larp4aa	95	47.321	ENSTGUG00000003479	LARP4	99	49.486	Taeniopygia_guttata
ENSCSEG00000001963	larp4aa	64	54.120	ENSTRUG00000007206	larp4ab	100	46.506	Takifugu_rubripes
ENSCSEG00000001963	larp4aa	95	74.312	ENSTNIG00000015109	larp4aa	99	73.117	Tetraodon_nigroviridis
ENSCSEG00000001963	larp4aa	95	45.603	ENSTNIG00000014571	larp4ab	100	45.581	Tetraodon_nigroviridis
ENSCSEG00000001963	larp4aa	79	54.519	ENSTBEG00000005167	LARP4	87	54.519	Tupaia_belangeri
ENSCSEG00000001963	larp4aa	95	47.577	ENSTTRG00000003764	LARP4	99	47.510	Tursiops_truncatus
ENSCSEG00000001963	larp4aa	51	64.611	ENSUAMG00000013764	LARP4	98	56.660	Ursus_americanus
ENSCSEG00000001963	larp4aa	81	63.926	ENSUMAG00000008473	LARP4	99	50.256	Ursus_maritimus
ENSCSEG00000001963	larp4aa	81	61.440	ENSVPAG00000010136	LARP4	99	49.052	Vicugna_pacos
ENSCSEG00000001963	larp4aa	81	64.611	ENSVVUG00000024717	LARP4	99	61.053	Vulpes_vulpes
ENSCSEG00000001963	larp4aa	82	51.780	ENSXETG00000007283	larp4	91	51.267	Xenopus_tropicalis
ENSCSEG00000001963	larp4aa	100	77.328	ENSXCOG00000006387	larp4aa	100	77.328	Xiphophorus_couchianus
ENSCSEG00000001963	larp4aa	100	81.273	ENSXMAG00000010519	larp4aa	100	81.395	Xiphophorus_maculatus
ENSCSEG00000001963	larp4aa	95	48.416	ENSXMAG00000002156	larp4ab	99	48.289	Xiphophorus_maculatus