EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000001968 (Gene tree)
Gene ID: 103383469
Gene Symbol: sart1
Alias: zgc:91927
Full Name: spliceosome associated factor 1%2C recruiter of U4/U6.U5 tri-snRNP
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2304 bases
Position: chr9:4172902-4175205
Accession: 103383469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000002990	SART-1	PF03343.13	2.2e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003034	-	2304	XM_008316595	ENSCSEP00000002990	767 (aa)	XP_008314817	UPI0004963E6A

Gene Model

Click here to download ENSCSEG00000001968's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001968's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001968	sart1	100	85.917	ENSAPOG00000017256	sart1	100	86.176	Acanthochromis_polyacanthus
ENSCSEG00000001968	sart1	100	85.899	ENSAOCG00000002873	sart1	100	86.158	Amphiprion_ocellaris
ENSCSEG00000001968	sart1	100	85.770	ENSAPEG00000002705	sart1	100	86.028	Amphiprion_percula
ENSCSEG00000001968	sart1	100	85.344	ENSATEG00000010608	sart1	100	85.344	Anabas_testudineus
ENSCSEG00000001968	sart1	100	77.313	ENSAMXG00000007275	sart1	100	77.001	Astyanax_mexicanus
ENSCSEG00000001968	sart1	93	77.886	ENSDARG00000005945	sart1	100	77.022	Danio_rerio
ENSCSEG00000001968	sart1	100	76.777	ENSELUG00000015791	sart1	100	75.888	Esox_lucius
ENSCSEG00000001968	sart1	100	85.659	ENSMAMG00000012486	sart1	100	86.176	Mastacembelus_armatus
ENSCSEG00000001968	sart1	100	83.959	ENSMALG00000018262	sart1	100	83.959	Monopterus_albus
ENSCSEG00000001968	sart1	100	76.015	ENSPKIG00000023523	sart1	100	75.508	Paramormyrops_kingsleyae
ENSCSEG00000001968	sart1	100	76.553	ENSPNAG00000002187	sart1	100	76.620	Pygocentrus_nattereri