EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000001983 (Gene tree)
Gene ID: 103399830
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5205 bases
Position: chr2:12412459-12417663
Accession: 103399830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000003028	ResIII	PF04851.15	2.7e-08	1	1
ENSCSEP00000003028	DEAD	PF00270.29	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003072	-	2166	XM_008338451	ENSCSEP00000003028	721 (aa)	XP_008336673	-

Gene Model

Click here to download ENSCSEG00000001983's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000001983's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000001983	rad54l	65	30.932	ENSCSEG00000009723	-	64	30.932
ENSCSEG00000001983	rad54l	77	46.573	ENSCSEG00000001601	rad54b	67	47.100

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000001983	rad54l	99	77.852	ENSG00000085999	RAD54L	100	81.333	Homo_sapiens
ENSCSEG00000001983	rad54l	99	85.656	ENSAPOG00000011643	rad54l	100	85.656	Acanthochromis_polyacanthus
ENSCSEG00000001983	rad54l	99	77.480	ENSAMEG00000013902	RAD54L	99	77.480	Ailuropoda_melanoleuca
ENSCSEG00000001983	rad54l	99	85.521	ENSACIG00000001939	rad54l	99	85.521	Amphilophus_citrinellus
ENSCSEG00000001983	rad54l	99	88.889	ENSAOCG00000017576	rad54l	99	88.889	Amphiprion_ocellaris
ENSCSEG00000001983	rad54l	93	93.323	ENSAPEG00000020658	rad54l	93	93.323	Amphiprion_percula
ENSCSEG00000001983	rad54l	95	92.117	ENSATEG00000006767	rad54l	98	92.117	Anabas_testudineus
ENSCSEG00000001983	rad54l	94	83.923	ENSAPLG00000006389	RAD54L	97	83.923	Anas_platyrhynchos
ENSCSEG00000001983	rad54l	99	80.728	ENSACAG00000002312	RAD54L	99	80.728	Anolis_carolinensis
ENSCSEG00000001983	rad54l	99	78.150	ENSANAG00000035439	RAD54L	99	78.121	Aotus_nancymaae
ENSCSEG00000001983	rad54l	99	85.597	ENSACLG00000018711	rad54l	99	85.597	Astatotilapia_calliptera
ENSCSEG00000001983	rad54l	99	84.865	ENSAMXG00000012777	rad54l	99	84.865	Astyanax_mexicanus
ENSCSEG00000001983	rad54l	99	77.748	ENSBTAG00000019901	RAD54L	99	77.748	Bos_taurus
ENSCSEG00000001983	rad54l	94	59.765	WBGene00004298	rad-54	83	59.765	Caenorhabditis_elegans
ENSCSEG00000001983	rad54l	97	78.442	ENSCJAG00000021080	RAD54L	91	78.442	Callithrix_jacchus
ENSCSEG00000001983	rad54l	99	77.987	ENSCAFG00000004272	RAD54L	99	77.987	Canis_familiaris
ENSCSEG00000001983	rad54l	99	78.016	ENSCAFG00020015066	RAD54L	99	78.016	Canis_lupus_dingo
ENSCSEG00000001983	rad54l	99	77.644	ENSCHIG00000020118	RAD54L	99	77.644	Capra_hircus
ENSCSEG00000001983	rad54l	99	77.614	ENSTSYG00000002032	RAD54L	99	77.614	Carlito_syrichta
ENSCSEG00000001983	rad54l	99	77.852	ENSCPOG00000006768	RAD54L	99	77.852	Cavia_porcellus
ENSCSEG00000001983	rad54l	99	77.987	ENSCCAG00000025783	RAD54L	99	77.987	Cebus_capucinus
ENSCSEG00000001983	rad54l	99	77.987	ENSCATG00000030589	RAD54L	99	77.987	Cercocebus_atys
ENSCSEG00000001983	rad54l	99	77.987	ENSCLAG00000004645	RAD54L	99	77.987	Chinchilla_lanigera
ENSCSEG00000001983	rad54l	99	77.852	ENSCSAG00000001229	RAD54L	99	77.852	Chlorocebus_sabaeus
ENSCSEG00000001983	rad54l	99	79.408	ENSCPBG00000005675	RAD54L	99	79.408	Chrysemys_picta_bellii
ENSCSEG00000001983	rad54l	99	62.484	ENSCING00000024456	-	99	62.353	Ciona_intestinalis
ENSCSEG00000001983	rad54l	99	62.500	ENSCSAVG00000010859	-	99	62.500	Ciona_savignyi
ENSCSEG00000001983	rad54l	99	77.852	ENSCANG00000034891	RAD54L	99	77.852	Colobus_angolensis_palliatus
ENSCSEG00000001983	rad54l	99	77.493	ENSCGRG00001014807	Rad54l	99	77.493	Cricetulus_griseus_chok1gshd
ENSCSEG00000001983	rad54l	99	77.493	ENSCGRG00000016038	Rad54l	99	77.493	Cricetulus_griseus_crigri
ENSCSEG00000001983	rad54l	79	88.710	ENSCVAG00000019561	rad54l	100	88.710	Cyprinodon_variegatus
ENSCSEG00000001983	rad54l	99	84.574	ENSDARG00000018623	rad54l	99	84.574	Danio_rerio
ENSCSEG00000001983	rad54l	99	77.315	ENSDNOG00000003395	RAD54L	99	77.315	Dasypus_novemcinctus
ENSCSEG00000001983	rad54l	99	72.400	ENSDORG00000002632	Rad54l	99	72.533	Dipodomys_ordii
ENSCSEG00000001983	rad54l	93	57.481	FBgn0002989	okr	86	57.481	Drosophila_melanogaster
ENSCSEG00000001983	rad54l	77	75.109	ENSETEG00000000550	RAD54L	78	75.109	Echinops_telfairi
ENSCSEG00000001983	rad54l	99	77.703	ENSEASG00005004511	RAD54L	99	79.429	Equus_asinus_asinus
ENSCSEG00000001983	rad54l	99	79.363	ENSECAG00000008760	RAD54L	99	79.363	Equus_caballus
ENSCSEG00000001983	rad54l	99	76.242	ENSEEUG00000008113	RAD54L	99	76.242	Erinaceus_europaeus
ENSCSEG00000001983	rad54l	99	86.193	ENSELUG00000002295	rad54l	99	86.193	Esox_lucius
ENSCSEG00000001983	rad54l	99	77.181	ENSFCAG00000003444	RAD54L	99	77.181	Felis_catus
ENSCSEG00000001983	rad54l	99	79.518	ENSFALG00000009480	RAD54L	99	79.518	Ficedula_albicollis
ENSCSEG00000001983	rad54l	99	77.584	ENSFDAG00000007806	RAD54L	99	77.584	Fukomys_damarensis
ENSCSEG00000001983	rad54l	59	87.850	ENSFHEG00000009824	rad54l	74	87.850	Fundulus_heteroclitus
ENSCSEG00000001983	rad54l	99	84.741	ENSGMOG00000014568	rad54l	99	84.741	Gadus_morhua
ENSCSEG00000001983	rad54l	99	79.622	ENSGALG00000010356	RAD54L	92	79.622	Gallus_gallus
ENSCSEG00000001983	rad54l	91	85.119	ENSGAFG00000011110	rad54l	99	85.119	Gambusia_affinis
ENSCSEG00000001983	rad54l	99	88.633	ENSGACG00000003111	rad54l	97	88.633	Gasterosteus_aculeatus
ENSCSEG00000001983	rad54l	99	79.032	ENSGAGG00000014089	RAD54L	96	79.032	Gopherus_agassizii
ENSCSEG00000001983	rad54l	99	77.987	ENSGGOG00000010602	RAD54L	99	77.987	Gorilla_gorilla
ENSCSEG00000001983	rad54l	99	86.008	ENSHBUG00000007793	rad54l	99	86.008	Haplochromis_burtoni
ENSCSEG00000001983	rad54l	99	78.255	ENSHGLG00000000753	RAD54L	99	78.255	Heterocephalus_glaber_female
ENSCSEG00000001983	rad54l	99	78.255	ENSHGLG00100016987	RAD54L	99	78.255	Heterocephalus_glaber_male
ENSCSEG00000001983	rad54l	93	89.021	ENSIPUG00000015999	rad54l	97	89.021	Ictalurus_punctatus
ENSCSEG00000001983	rad54l	99	77.181	ENSSTOG00000029125	RAD54L	99	77.181	Ictidomys_tridecemlineatus
ENSCSEG00000001983	rad54l	99	65.722	ENSJJAG00000000235	-	99	65.587	Jaculus_jaculus
ENSCSEG00000001983	rad54l	99	85.040	ENSKMAG00000009944	rad54l	99	85.040	Kryptolebias_marmoratus
ENSCSEG00000001983	rad54l	99	89.402	ENSLBEG00000014617	rad54l	98	93.796	Labrus_bergylta
ENSCSEG00000001983	rad54l	99	84.615	ENSLOCG00000004144	rad54l	99	85.714	Lepisosteus_oculatus
ENSCSEG00000001983	rad54l	99	77.212	ENSLAFG00000007583	RAD54L	100	77.614	Loxodonta_africana
ENSCSEG00000001983	rad54l	99	78.121	ENSMFAG00000031241	RAD54L	99	78.121	Macaca_fascicularis
ENSCSEG00000001983	rad54l	99	78.121	ENSMMUG00000011568	RAD54L	99	78.121	Macaca_mulatta
ENSCSEG00000001983	rad54l	99	77.852	ENSMNEG00000038562	RAD54L	99	77.852	Macaca_nemestrina
ENSCSEG00000001983	rad54l	99	77.987	ENSMLEG00000038145	RAD54L	99	77.987	Mandrillus_leucophaeus
ENSCSEG00000001983	rad54l	99	85.617	ENSMAMG00000022180	rad54l	99	90.923	Mastacembelus_armatus
ENSCSEG00000001983	rad54l	99	85.460	ENSMZEG00005018081	rad54l	99	85.460	Maylandia_zebra
ENSCSEG00000001983	rad54l	99	79.515	ENSMGAG00000010634	RAD54L	99	79.515	Meleagris_gallopavo
ENSCSEG00000001983	rad54l	99	77.628	ENSMAUG00000020076	Rad54l	99	77.628	Mesocricetus_auratus
ENSCSEG00000001983	rad54l	99	77.987	ENSMICG00000003266	RAD54L	99	77.987	Microcebus_murinus
ENSCSEG00000001983	rad54l	99	78.302	ENSMOCG00000001778	Rad54l	99	78.302	Microtus_ochrogaster
ENSCSEG00000001983	rad54l	99	84.771	ENSMALG00000021148	rad54l	99	84.771	Monopterus_albus
ENSCSEG00000001983	rad54l	99	73.856	MGP_CAROLIEiJ_G0026325	Rad54l	99	73.856	Mus_caroli
ENSCSEG00000001983	rad54l	99	77.315	ENSMUSG00000028702	Rad54l	99	77.315	Mus_musculus
ENSCSEG00000001983	rad54l	99	77.554	MGP_PahariEiJ_G0028657	Rad54l	99	77.554	Mus_pahari
ENSCSEG00000001983	rad54l	99	77.450	MGP_SPRETEiJ_G0027297	Rad54l	99	77.450	Mus_spretus
ENSCSEG00000001983	rad54l	99	78.046	ENSMPUG00000012883	RAD54L	99	78.046	Mustela_putorius_furo
ENSCSEG00000001983	rad54l	99	78.179	ENSMLUG00000003763	RAD54L	99	78.179	Myotis_lucifugus
ENSCSEG00000001983	rad54l	99	77.584	ENSNGAG00000024213	Rad54l	99	77.584	Nannospalax_galili
ENSCSEG00000001983	rad54l	99	77.852	ENSNLEG00000016548	RAD54L	99	77.852	Nomascus_leucogenys
ENSCSEG00000001983	rad54l	93	79.643	ENSMEUG00000006793	RAD54L	99	79.643	Notamacropus_eugenii
ENSCSEG00000001983	rad54l	90	82.578	ENSOPRG00000016016	RAD54L	90	82.578	Ochotona_princeps
ENSCSEG00000001983	rad54l	99	78.284	ENSODEG00000008519	RAD54L	99	78.284	Octodon_degus
ENSCSEG00000001983	rad54l	99	85.366	ENSONIG00000007659	rad54l	99	85.366	Oreochromis_niloticus
ENSCSEG00000001983	rad54l	99	77.987	ENSOCUG00000005229	RAD54L	99	77.987	Oryctolagus_cuniculus
ENSCSEG00000001983	rad54l	99	84.720	ENSORLG00000002958	rad54l	99	84.993	Oryzias_latipes
ENSCSEG00000001983	rad54l	99	85.246	ENSORLG00020006554	rad54l	99	88.399	Oryzias_latipes_hni
ENSCSEG00000001983	rad54l	99	84.741	ENSORLG00015002907	rad54l	99	85.014	Oryzias_latipes_hsok
ENSCSEG00000001983	rad54l	99	85.246	ENSOMEG00000007770	rad54l	99	85.246	Oryzias_melastigma
ENSCSEG00000001983	rad54l	99	77.510	ENSOARG00000002264	RAD54L	99	77.510	Ovis_aries
ENSCSEG00000001983	rad54l	99	78.121	ENSPPAG00000031222	RAD54L	99	78.121	Pan_paniscus
ENSCSEG00000001983	rad54l	99	77.181	ENSPPRG00000010317	RAD54L	99	77.181	Panthera_pardus
ENSCSEG00000001983	rad54l	99	77.181	ENSPTIG00000012200	RAD54L	99	77.181	Panthera_tigris_altaica
ENSCSEG00000001983	rad54l	99	77.987	ENSPTRG00000000689	RAD54L	99	77.987	Pan_troglodytes
ENSCSEG00000001983	rad54l	99	77.987	ENSPANG00000016295	RAD54L	99	77.987	Papio_anubis
ENSCSEG00000001983	rad54l	99	78.668	ENSPKIG00000016172	rad54l	99	78.668	Paramormyrops_kingsleyae
ENSCSEG00000001983	rad54l	99	79.268	ENSPSIG00000003258	RAD54L	99	79.268	Pelodiscus_sinensis
ENSCSEG00000001983	rad54l	99	79.019	ENSPMGG00000016335	rad54l	99	79.019	Periophthalmus_magnuspinnatus
ENSCSEG00000001983	rad54l	99	77.898	ENSPEMG00000011422	Rad54l	99	77.898	Peromyscus_maniculatus_bairdii
ENSCSEG00000001983	rad54l	99	68.817	ENSPMAG00000007719	rad54l	99	68.817	Petromyzon_marinus
ENSCSEG00000001983	rad54l	99	78.167	ENSPCIG00000029032	RAD54L	99	78.167	Phascolarctos_cinereus
ENSCSEG00000001983	rad54l	84	90.969	ENSPFOG00000013732	rad54l	96	90.969	Poecilia_formosa
ENSCSEG00000001983	rad54l	84	87.825	ENSPLAG00000023416	rad54l	99	87.825	Poecilia_latipinna
ENSCSEG00000001983	rad54l	91	85.268	ENSPMEG00000008299	rad54l	99	85.268	Poecilia_mexicana
ENSCSEG00000001983	rad54l	99	84.532	ENSPREG00000019955	rad54l	99	84.532	Poecilia_reticulata
ENSCSEG00000001983	rad54l	99	66.220	ENSPPYG00000001398	RAD54L	99	66.220	Pongo_abelii
ENSCSEG00000001983	rad54l	79	80.583	ENSPCAG00000005323	RAD54L	80	80.583	Procavia_capensis
ENSCSEG00000001983	rad54l	99	77.718	ENSPCOG00000015423	RAD54L	99	77.718	Propithecus_coquereli
ENSCSEG00000001983	rad54l	99	85.597	ENSPNYG00000002942	rad54l	99	85.597	Pundamilia_nyererei
ENSCSEG00000001983	rad54l	99	84.303	ENSPNAG00000012483	rad54l	99	84.303	Pygocentrus_nattereri
ENSCSEG00000001983	rad54l	99	77.315	ENSRNOG00000013148	Rad54l	99	77.315	Rattus_norvegicus
ENSCSEG00000001983	rad54l	99	77.987	ENSRBIG00000043495	RAD54L	99	77.987	Rhinopithecus_bieti
ENSCSEG00000001983	rad54l	99	77.987	ENSRROG00000020844	RAD54L	99	77.987	Rhinopithecus_roxellana
ENSCSEG00000001983	rad54l	83	49.845	YGL163C	RAD54	71	50.000	Saccharomyces_cerevisiae
ENSCSEG00000001983	rad54l	99	77.852	ENSSBOG00000024672	RAD54L	99	77.852	Saimiri_boliviensis_boliviensis
ENSCSEG00000001983	rad54l	99	78.091	ENSSHAG00000000110	RAD54L	99	78.091	Sarcophilus_harrisii
ENSCSEG00000001983	rad54l	99	88.618	ENSSDUG00000019147	rad54l	99	88.618	Seriola_dumerili
ENSCSEG00000001983	rad54l	99	90.403	ENSSLDG00000012330	rad54l	99	90.403	Seriola_lalandi_dorsalis
ENSCSEG00000001983	rad54l	83	78.296	ENSSARG00000006689	RAD54L	99	78.296	Sorex_araneus
ENSCSEG00000001983	rad54l	99	87.398	ENSSPAG00000011016	rad54l	99	87.398	Stegastes_partitus
ENSCSEG00000001983	rad54l	99	77.614	ENSSSCG00000003905	RAD54L	99	77.614	Sus_scrofa
ENSCSEG00000001983	rad54l	99	79.518	ENSTGUG00000008233	RAD54L	99	79.920	Taeniopygia_guttata
ENSCSEG00000001983	rad54l	99	86.269	ENSTRUG00000008410	rad54l	99	86.269	Takifugu_rubripes
ENSCSEG00000001983	rad54l	99	80.764	ENSTNIG00000004716	rad54l	99	80.323	Tetraodon_nigroviridis
ENSCSEG00000001983	rad54l	99	74.631	ENSTTRG00000006315	RAD54L	99	74.631	Tursiops_truncatus
ENSCSEG00000001983	rad54l	99	77.328	ENSUAMG00000011824	RAD54L	99	77.328	Ursus_americanus
ENSCSEG00000001983	rad54l	99	76.248	ENSUMAG00000023603	RAD54L	99	76.248	Ursus_maritimus
ENSCSEG00000001983	rad54l	99	77.852	ENSVVUG00000007201	RAD54L	99	77.852	Vulpes_vulpes
ENSCSEG00000001983	rad54l	93	78.287	ENSXETG00000004369	rad54l	94	78.287	Xenopus_tropicalis
ENSCSEG00000001983	rad54l	54	82.872	ENSXCOG00000016028	rad54l	84	82.872	Xiphophorus_couchianus