EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002313 (Gene tree)
Gene ID: 103377868
Gene Symbol: -
Alias: -
Full Name: Fanconi anemia complementation group M
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 30849 bases
Position: chr1:8149550-8180398
Accession: 103377868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000003524	ResIII	PF04851.15	3.2e-17	1	1
ENSCSEP00000003524	DEAD	PF00270.29	2.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003569	-	6120	XM_008308840	ENSCSEP00000003524	2039 (aa)	XP_008307062	UPI000495054A

Gene Model

Click here to download ENSCSEG00000002313's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002313's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002313	-	73	52.626	ENSG00000187790	FANCM	97	58.403	Homo_sapiens
ENSCSEG00000002313	-	82	53.599	ENSAMEG00000002114	FANCM	73	51.616	Ailuropoda_melanoleuca
ENSCSEG00000002313	-	99	61.698	ENSATEG00000012412	-	99	61.357	Anabas_testudineus
ENSCSEG00000002313	-	71	54.492	ENSANAG00000025075	FANCM	69	54.492	Aotus_nancymaae
ENSCSEG00000002313	-	100	58.310	ENSACLG00000016008	-	99	58.898	Astatotilapia_calliptera
ENSCSEG00000002313	-	92	56.345	ENSBTAG00000002612	FANCM	94	55.283	Bos_taurus
ENSCSEG00000002313	-	79	48.138	ENSCAFG00000014062	FANCM	59	48.651	Canis_familiaris
ENSCSEG00000002313	-	71	54.941	ENSCPOG00000001446	FANCM	67	60.918	Cavia_porcellus
ENSCSEG00000002313	-	67	54.842	ENSCCAG00000026593	FANCM	67	54.842	Cebus_capucinus
ENSCSEG00000002313	-	71	54.598	ENSCATG00000031379	FANCM	69	54.598	Cercocebus_atys
ENSCSEG00000002313	-	71	54.482	ENSCSAG00000015308	FANCM	69	54.482	Chlorocebus_sabaeus
ENSCSEG00000002313	-	86	58.950	ENSCPBG00000015089	FANCM	89	58.950	Chrysemys_picta_bellii
ENSCSEG00000002313	-	71	54.366	ENSCANG00000029498	FANCM	69	54.186	Colobus_angolensis_palliatus
ENSCSEG00000002313	-	71	54.376	ENSCGRG00001023573	Fancm	66	60.137	Cricetulus_griseus_chok1gshd
ENSCSEG00000002313	-	88	56.814	ENSCVAG00000015579	-	97	57.836	Cyprinodon_variegatus
ENSCSEG00000002313	-	72	53.760	ENSDNOG00000007697	FANCM	70	54.097	Dasypus_novemcinctus
ENSCSEG00000002313	-	88	58.740	ENSDORG00000010095	Fancm	66	61.188	Dipodomys_ordii
ENSCSEG00000002313	-	69	49.633	ENSETEG00000003360	FANCM	52	63.043	Echinops_telfairi
ENSCSEG00000002313	-	60	54.662	ENSEASG00005007781	FANCM	90	67.067	Equus_asinus_asinus
ENSCSEG00000002313	-	71	54.831	ENSECAG00000018694	FANCM	51	60.411	Equus_caballus
ENSCSEG00000002313	-	58	53.309	ENSEEUG00000005607	-	51	53.309	Erinaceus_europaeus
ENSCSEG00000002313	-	84	49.963	ENSELUG00000015761	-	89	52.567	Esox_lucius
ENSCSEG00000002313	-	73	53.601	ENSFALG00000001703	FANCM	69	53.601	Ficedula_albicollis
ENSCSEG00000002313	-	92	54.472	ENSFDAG00000009043	FANCM	61	60.246	Fukomys_damarensis
ENSCSEG00000002313	-	93	65.116	ENSGMOG00000002019	-	90	56.151	Gadus_morhua
ENSCSEG00000002313	-	64	56.499	ENSGALG00000031182	FANCM	66	56.168	Gallus_gallus
ENSCSEG00000002313	-	99	54.310	ENSGACG00000009448	-	97	55.611	Gasterosteus_aculeatus
ENSCSEG00000002313	-	73	52.464	ENSGGOG00000008546	FANCM	80	47.325	Gorilla_gorilla
ENSCSEG00000002313	-	100	57.650	ENSHBUG00000007085	-	99	57.997	Haplochromis_burtoni
ENSCSEG00000002313	-	71	54.936	ENSHGLG00000013787	FANCM	64	60.357	Heterocephalus_glaber_female
ENSCSEG00000002313	-	71	54.936	ENSHGLG00100006377	FANCM	64	60.357	Heterocephalus_glaber_male
ENSCSEG00000002313	-	94	62.877	ENSIPUG00000014629	fancm	88	60.590	Ictalurus_punctatus
ENSCSEG00000002313	-	85	62.893	ENSLBEG00000004982	-	98	57.731	Labrus_bergylta
ENSCSEG00000002313	-	94	55.758	ENSLACG00000007739	FANCM	80	60.834	Latimeria_chalumnae
ENSCSEG00000002313	-	93	47.945	ENSLOCG00000011318	FANCM	90	48.094	Lepisosteus_oculatus
ENSCSEG00000002313	-	71	54.312	ENSMFAG00000000383	FANCM	69	54.312	Macaca_fascicularis
ENSCSEG00000002313	-	71	54.312	ENSMMUG00000016513	FANCM	69	54.312	Macaca_mulatta
ENSCSEG00000002313	-	71	54.535	ENSMNEG00000038659	FANCM	69	54.535	Macaca_nemestrina
ENSCSEG00000002313	-	71	47.456	ENSMLEG00000035743	FANCM	67	46.864	Mandrillus_leucophaeus
ENSCSEG00000002313	-	100	60.370	ENSMAMG00000007087	-	99	60.539	Mastacembelus_armatus
ENSCSEG00000002313	-	100	58.171	ENSMZEG00005004644	-	99	58.758	Maylandia_zebra
ENSCSEG00000002313	-	71	50.521	ENSMAUG00000015450	Fancm	66	55.978	Mesocricetus_auratus
ENSCSEG00000002313	-	80	48.747	ENSMICG00000005811	FANCM	90	42.986	Microcebus_murinus
ENSCSEG00000002313	-	62	58.005	ENSMOCG00000008775	Fancm	51	60.053	Microtus_ochrogaster
ENSCSEG00000002313	-	86	60.000	ENSMMOG00000010215	-	96	60.325	Mola_mola
ENSCSEG00000002313	-	79	53.458	ENSMODG00000007334	FANCM	74	58.449	Monodelphis_domestica
ENSCSEG00000002313	-	76	56.798	ENSMUSG00000055884	Fancm	89	65.482	Mus_musculus
ENSCSEG00000002313	-	79	47.708	ENSMPUG00000004849	FANCM	60	47.354	Mustela_putorius_furo
ENSCSEG00000002313	-	82	52.240	ENSMLUG00000006671	FANCM	60	47.668	Myotis_lucifugus
ENSCSEG00000002313	-	88	46.586	ENSNGAG00000017199	Fancm	77	50.213	Nannospalax_galili
ENSCSEG00000002313	-	88	47.465	ENSNLEG00000004432	FANCM	80	47.465	Nomascus_leucogenys
ENSCSEG00000002313	-	55	54.876	ENSMEUG00000004977	-	56	54.876	Notamacropus_eugenii
ENSCSEG00000002313	-	92	73.090	ENSONIG00000003531	-	90	72.385	Oreochromis_niloticus
ENSCSEG00000002313	-	85	58.287	ENSOANG00000013997	FANCM	68	58.149	Ornithorhynchus_anatinus
ENSCSEG00000002313	-	72	54.864	ENSOCUG00000007539	FANCM	71	54.412	Oryctolagus_cuniculus
ENSCSEG00000002313	-	100	57.496	ENSORLG00000014503	-	99	57.468	Oryzias_latipes
ENSCSEG00000002313	-	100	57.482	ENSORLG00020013516	-	99	57.265	Oryzias_latipes_hni
ENSCSEG00000002313	-	100	57.367	ENSORLG00015012100	-	99	57.055	Oryzias_latipes_hsok
ENSCSEG00000002313	-	100	57.925	ENSOMEG00000010717	-	99	57.441	Oryzias_melastigma
ENSCSEG00000002313	-	71	55.814	ENSOGAG00000003015	FANCM	69	55.814	Otolemur_garnettii
ENSCSEG00000002313	-	94	54.286	ENSOARG00000009429	FANCM	71	53.821	Ovis_aries
ENSCSEG00000002313	-	80	47.509	ENSPPAG00000028944	FANCM	80	47.601	Pan_paniscus
ENSCSEG00000002313	-	73	52.626	ENSPTRG00000006307	FANCM	80	47.465	Pan_troglodytes
ENSCSEG00000002313	-	71	54.366	ENSPANG00000023200	FANCM	69	54.366	Papio_anubis
ENSCSEG00000002313	-	84	77.964	ENSPFOG00000002008	-	84	77.964	Poecilia_formosa
ENSCSEG00000002313	-	99	56.371	ENSPLAG00000014164	-	99	56.319	Poecilia_latipinna
ENSCSEG00000002313	-	99	56.805	ENSPMEG00000010746	-	99	56.271	Poecilia_mexicana
ENSCSEG00000002313	-	99	56.108	ENSPREG00000019849	-	99	56.337	Poecilia_reticulata
ENSCSEG00000002313	-	71	54.366	ENSPPYG00000005781	FANCM	73	54.366	Pongo_abelii
ENSCSEG00000002313	-	61	52.924	ENSPCAG00000011363	-	54	52.924	Procavia_capensis
ENSCSEG00000002313	-	64	54.832	ENSPCOG00000014388	FANCM	67	54.832	Propithecus_coquereli
ENSCSEG00000002313	-	66	53.684	ENSPVAG00000015802	FANCM	64	53.684	Pteropus_vampyrus
ENSCSEG00000002313	-	99	44.768	ENSPNAG00000013558	-	99	44.403	Pygocentrus_nattereri
ENSCSEG00000002313	-	82	50.720	ENSRNOG00000056721	Fancm	91	50.641	Rattus_norvegicus
ENSCSEG00000002313	-	71	54.007	ENSRBIG00000011451	FANCM	79	47.081	Rhinopithecus_bieti
ENSCSEG00000002313	-	71	54.249	ENSRROG00000028917	FANCM	79	47.261	Rhinopithecus_roxellana
ENSCSEG00000002313	-	71	54.959	ENSSBOG00000030882	FANCM	69	54.959	Saimiri_boliviensis_boliviensis
ENSCSEG00000002313	-	99	62.535	ENSSMAG00000019903	-	100	76.923	Scophthalmus_maximus
ENSCSEG00000002313	-	71	61.682	ENSSDUG00000016682	-	91	88.124	Seriola_dumerili
ENSCSEG00000002313	-	99	63.545	ENSSLDG00000003408	-	99	63.465	Seriola_lalandi_dorsalis
ENSCSEG00000002313	-	54	57.951	ENSSARG00000002618	FANCM	51	57.798	Sorex_araneus
ENSCSEG00000002313	-	71	55.180	ENSSSCG00000005000	FANCM	79	47.246	Sus_scrofa
ENSCSEG00000002313	-	99	53.546	ENSTNIG00000017277	-	100	53.515	Tetraodon_nigroviridis
ENSCSEG00000002313	-	79	47.119	ENSTTRG00000006669	FANCM	79	46.747	Tursiops_truncatus
ENSCSEG00000002313	-	66	57.647	ENSVPAG00000005763	FANCM	60	69.565	Vicugna_pacos
ENSCSEG00000002313	-	79	47.996	ENSVVUG00000000357	FANCM	59	48.417	Vulpes_vulpes
ENSCSEG00000002313	-	99	56.238	ENSXMAG00000007702	-	99	55.813	Xiphophorus_maculatus