EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002374 (Gene tree)
Gene ID: 103377675
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 4784 bases
Position: chr4:1943238-1948021
Accession: 103377675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000003643	SRP54	PF00448.22	1.2e-48	1	1
ENSCSEP00000003636	SRP54	PF00448.22	2.5e-48	1	1
ENSCSEP00000003643	SRP54_N	PF02881.19	2.7e-09	1	1
ENSCSEP00000003636	SRP54_N	PF02881.19	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003683	-	1971	XM_008308559	ENSCSEP00000003636	651 (aa)	XP_008306781	UPI00049817B7
ENSCSET00000003690	-	1815	-	ENSCSEP00000003643	604 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000002374's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002374's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002374	srpra	100	67.474	ENSG00000182934	SRPRA	100	67.625	Homo_sapiens
ENSCSEG00000002374	srpra	100	87.596	ENSAPOG00000017588	srpra	100	88.055	Acanthochromis_polyacanthus
ENSCSEG00000002374	srpra	100	68.230	ENSAMEG00000000117	SRPRA	100	67.071	Ailuropoda_melanoleuca
ENSCSEG00000002374	srpra	100	82.083	ENSACIG00000021588	srpra	100	83.461	Amphilophus_citrinellus
ENSCSEG00000002374	srpra	100	87.289	ENSAOCG00000018884	srpra	100	87.749	Amphiprion_ocellaris
ENSCSEG00000002374	srpra	100	87.289	ENSAPEG00000022286	srpra	100	85.691	Amphiprion_percula
ENSCSEG00000002374	srpra	100	85.015	ENSATEG00000023578	srpra	95	94.529	Anabas_testudineus
ENSCSEG00000002374	srpra	94	70.340	ENSAPLG00000016079	SRPRA	99	70.065	Anas_platyrhynchos
ENSCSEG00000002374	srpra	100	70.499	ENSACAG00000000108	SRPRA	100	70.348	Anolis_carolinensis
ENSCSEG00000002374	srpra	100	67.727	ENSANAG00000020346	SRPRA	100	67.727	Aotus_nancymaae
ENSCSEG00000002374	srpra	100	83.920	ENSACLG00000000518	srpra	100	84.227	Astatotilapia_calliptera
ENSCSEG00000002374	srpra	100	72.186	ENSAMXG00000009975	srpra	100	71.865	Astyanax_mexicanus
ENSCSEG00000002374	srpra	100	67.576	ENSBTAG00000014105	SRPRA	100	67.825	Bos_taurus
ENSCSEG00000002374	srpra	99	49.302	WBGene00009521	F38A1.8	99	48.754	Caenorhabditis_elegans
ENSCSEG00000002374	srpra	100	67.678	ENSCJAG00000008752	SRPRA	100	67.678	Callithrix_jacchus
ENSCSEG00000002374	srpra	100	66.515	ENSCAFG00000010474	SRPRA	100	65.909	Canis_familiaris
ENSCSEG00000002374	srpra	100	68.030	ENSCAFG00020010608	SRPRA	100	67.424	Canis_lupus_dingo
ENSCSEG00000002374	srpra	100	67.771	ENSCHIG00000012423	SRPRA	100	67.068	Capra_hircus
ENSCSEG00000002374	srpra	82	84.366	ENSTSYG00000005187	SRPRA	89	86.984	Carlito_syrichta
ENSCSEG00000002374	srpra	95	68.430	ENSCAPG00000007098	SRPRA	91	87.218	Cavia_aperea
ENSCSEG00000002374	srpra	100	67.957	ENSCPOG00000014976	SRPRA	91	87.218	Cavia_porcellus
ENSCSEG00000002374	srpra	100	67.727	ENSCCAG00000025602	SRPRA	100	67.727	Cebus_capucinus
ENSCSEG00000002374	srpra	100	68.030	ENSCATG00000039354	SRPRA	100	68.030	Cercocebus_atys
ENSCSEG00000002374	srpra	100	68.085	ENSCLAG00000016839	SRPRA	100	68.085	Chinchilla_lanigera
ENSCSEG00000002374	srpra	100	67.879	ENSCSAG00000002271	SRPRA	100	67.879	Chlorocebus_sabaeus
ENSCSEG00000002374	srpra	53	87.755	ENSCHOG00000010015	-	71	87.755	Choloepus_hoffmanni
ENSCSEG00000002374	srpra	100	68.072	ENSCPBG00000011128	SRPRA	100	70.045	Chrysemys_picta_bellii
ENSCSEG00000002374	srpra	99	58.974	ENSCING00000008954	-	100	58.974	Ciona_intestinalis
ENSCSEG00000002374	srpra	99	60.350	ENSCSAVG00000005602	-	100	59.840	Ciona_savignyi
ENSCSEG00000002374	srpra	100	67.879	ENSCANG00000032337	SRPRA	100	67.121	Colobus_angolensis_palliatus
ENSCSEG00000002374	srpra	100	67.927	ENSCGRG00001017670	Srpr	100	67.477	Cricetulus_griseus_chok1gshd
ENSCSEG00000002374	srpra	100	67.927	ENSCGRG00000009892	Srpr	90	87.407	Cricetulus_griseus_crigri
ENSCSEG00000002374	srpra	100	84.332	ENSCVAG00000019881	srpra	100	84.332	Cyprinodon_variegatus
ENSCSEG00000002374	srpra	100	79.027	ENSDARG00000061124	srpra	100	78.116	Danio_rerio
ENSCSEG00000002374	srpra	100	67.761	ENSDNOG00000010821	SRPRA	100	66.617	Dasypus_novemcinctus
ENSCSEG00000002374	srpra	100	68.085	ENSDORG00000016719	Srpr	100	68.085	Dipodomys_ordii
ENSCSEG00000002374	srpra	99	53.440	FBgn0010391	Gtp-bp	100	53.418	Drosophila_melanogaster
ENSCSEG00000002374	srpra	100	66.512	ENSETEG00000013956	SRPRA	100	65.913	Echinops_telfairi
ENSCSEG00000002374	srpra	54	83.333	ENSEBUG00000002602	srpra	99	68.650	Eptatretus_burgeri
ENSCSEG00000002374	srpra	100	68.134	ENSEASG00005022980	SRPRA	100	67.629	Equus_asinus_asinus
ENSCSEG00000002374	srpra	100	68.134	ENSECAG00000014692	SRPRA	100	67.629	Equus_caballus
ENSCSEG00000002374	srpra	100	63.775	ENSEEUG00000007920	SRPRA	100	62.481	Erinaceus_europaeus
ENSCSEG00000002374	srpra	100	82.344	ENSELUG00000017643	srpra	100	83.359	Esox_lucius
ENSCSEG00000002374	srpra	100	68.684	ENSFCAG00000011274	-	100	67.825	Felis_catus
ENSCSEG00000002374	srpra	80	63.039	ENSFCAG00000030894	-	99	61.985	Felis_catus
ENSCSEG00000002374	srpra	99	66.718	ENSFALG00000005048	SRPRA	99	66.718	Ficedula_albicollis
ENSCSEG00000002374	srpra	100	68.237	ENSFDAG00000016229	SRPRA	92	82.517	Fukomys_damarensis
ENSCSEG00000002374	srpra	100	84.992	ENSFHEG00000016959	srpra	100	85.299	Fundulus_heteroclitus
ENSCSEG00000002374	srpra	100	80.799	ENSGMOG00000013244	srpra	100	80.799	Gadus_morhua
ENSCSEG00000002374	srpra	100	69.618	ENSGALG00000030759	SRPRA	100	69.970	Gallus_gallus
ENSCSEG00000002374	srpra	100	85.145	ENSGAFG00000000453	srpra	100	85.452	Gambusia_affinis
ENSCSEG00000002374	srpra	100	82.622	ENSGACG00000006550	srpra	100	82.622	Gasterosteus_aculeatus
ENSCSEG00000002374	srpra	100	67.922	ENSGAGG00000021157	SRPRA	100	69.774	Gopherus_agassizii
ENSCSEG00000002374	srpra	100	67.474	ENSGGOG00000012962	SRPRA	100	67.625	Gorilla_gorilla
ENSCSEG00000002374	srpra	100	83.767	ENSHBUG00000000119	srpra	100	84.074	Haplochromis_burtoni
ENSCSEG00000002374	srpra	100	68.085	ENSHGLG00000001597	SRPR	94	87.879	Heterocephalus_glaber_female
ENSCSEG00000002374	srpra	100	68.085	ENSHGLG00100006449	SRPR	94	87.879	Heterocephalus_glaber_male
ENSCSEG00000002374	srpra	100	84.202	ENSHCOG00000010749	srpra	100	84.202	Hippocampus_comes
ENSCSEG00000002374	srpra	94	76.299	ENSIPUG00000000867	srpra	99	76.136	Ictalurus_punctatus
ENSCSEG00000002374	srpra	100	67.652	ENSSTOG00000009897	SRPRA	100	67.727	Ictidomys_tridecemlineatus
ENSCSEG00000002374	srpra	100	68.069	ENSJJAG00000020272	Srpr	100	67.496	Jaculus_jaculus
ENSCSEG00000002374	srpra	100	86.524	ENSKMAG00000002280	srpra	100	86.677	Kryptolebias_marmoratus
ENSCSEG00000002374	srpra	100	86.086	ENSLBEG00000009608	srpra	100	86.850	Labrus_bergylta
ENSCSEG00000002374	srpra	100	70.783	ENSLACG00000017781	SRPRA	100	71.729	Latimeria_chalumnae
ENSCSEG00000002374	srpra	100	76.748	ENSLOCG00000002733	srpra	100	76.783	Lepisosteus_oculatus
ENSCSEG00000002374	srpra	100	67.442	ENSLAFG00000010252	SRPRA	100	67.221	Loxodonta_africana
ENSCSEG00000002374	srpra	100	68.030	ENSMFAG00000032606	SRPRA	100	68.030	Macaca_fascicularis
ENSCSEG00000002374	srpra	100	68.030	ENSMMUG00000007938	SRPRA	100	68.030	Macaca_mulatta
ENSCSEG00000002374	srpra	100	68.030	ENSMNEG00000030709	SRPRA	100	68.030	Macaca_nemestrina
ENSCSEG00000002374	srpra	100	68.030	ENSMLEG00000043404	SRPRA	100	68.030	Mandrillus_leucophaeus
ENSCSEG00000002374	srpra	100	85.145	ENSMAMG00000000473	srpra	100	85.145	Mastacembelus_armatus
ENSCSEG00000002374	srpra	100	83.920	ENSMZEG00005013432	srpra	100	84.227	Maylandia_zebra
ENSCSEG00000002374	srpra	94	70.033	ENSMGAG00000000732	SRPRA	100	69.919	Meleagris_gallopavo
ENSCSEG00000002374	srpra	100	68.237	ENSMAUG00000015648	Srpr	100	67.477	Mesocricetus_auratus
ENSCSEG00000002374	srpra	100	67.341	ENSMICG00000015981	SRPRA	100	67.873	Microcebus_murinus
ENSCSEG00000002374	srpra	100	68.085	ENSMOCG00000008311	Srpr	100	67.325	Microtus_ochrogaster
ENSCSEG00000002374	srpra	100	82.931	ENSMMOG00000005019	srpra	100	82.931	Mola_mola
ENSCSEG00000002374	srpra	100	68.085	ENSMODG00000004576	-	100	67.121	Monodelphis_domestica
ENSCSEG00000002374	srpra	100	86.677	ENSMALG00000011343	srpra	100	86.830	Monopterus_albus
ENSCSEG00000002374	srpra	100	68.134	MGP_CAROLIEiJ_G0031951	Srpr	86	88.636	Mus_caroli
ENSCSEG00000002374	srpra	100	68.485	ENSMUSG00000032042	Srpr	86	87.879	Mus_musculus
ENSCSEG00000002374	srpra	100	67.835	MGP_PahariEiJ_G0014816	Srpr	86	87.879	Mus_pahari
ENSCSEG00000002374	srpra	92	82.759	MGP_SPRETEiJ_G0033075	Srpr	89	82.759	Mus_spretus
ENSCSEG00000002374	srpra	100	68.333	ENSMPUG00000006626	SRPRA	100	67.424	Mustela_putorius_furo
ENSCSEG00000002374	srpra	100	67.988	ENSMLUG00000017334	SRPRA	100	67.707	Myotis_lucifugus
ENSCSEG00000002374	srpra	100	67.963	ENSNGAG00000015686	Srpr	100	67.781	Nannospalax_galili
ENSCSEG00000002374	srpra	100	83.767	ENSNBRG00000017311	srpra	100	84.074	Neolamprologus_brichardi
ENSCSEG00000002374	srpra	99	64.734	ENSNLEG00000007467	SRPRA	100	67.624	Nomascus_leucogenys
ENSCSEG00000002374	srpra	94	67.799	ENSMEUG00000004956	SRPRA	100	67.633	Notamacropus_eugenii
ENSCSEG00000002374	srpra	92	75.610	ENSOPRG00000013160	SRPRA	100	64.145	Ochotona_princeps
ENSCSEG00000002374	srpra	100	68.030	ENSODEG00000004730	SRPRA	100	68.389	Octodon_degus
ENSCSEG00000002374	srpra	100	84.227	ENSONIG00000005324	srpra	100	84.533	Oreochromis_niloticus
ENSCSEG00000002374	srpra	100	68.333	ENSOCUG00000017057	SRPRA	100	68.333	Oryctolagus_cuniculus
ENSCSEG00000002374	srpra	100	83.129	ENSORLG00000014676	srpra	95	93.921	Oryzias_latipes
ENSCSEG00000002374	srpra	100	83.129	ENSORLG00020009240	srpra	100	83.436	Oryzias_latipes_hni
ENSCSEG00000002374	srpra	100	82.975	ENSORLG00015015405	srpra	100	83.282	Oryzias_latipes_hsok
ENSCSEG00000002374	srpra	100	82.669	ENSOMEG00000005872	srpra	100	82.975	Oryzias_melastigma
ENSCSEG00000002374	srpra	100	68.333	ENSOGAG00000008926	SRPRA	100	67.879	Otolemur_garnettii
ENSCSEG00000002374	srpra	100	65.303	ENSOARG00000012397	SRPRA	100	65.414	Ovis_aries
ENSCSEG00000002374	srpra	100	67.474	ENSPPAG00000030813	SRPRA	100	67.625	Pan_paniscus
ENSCSEG00000002374	srpra	100	68.684	ENSPPRG00000001542	SRPRA	100	67.825	Panthera_pardus
ENSCSEG00000002374	srpra	100	68.533	ENSPTIG00000006989	SRPRA	100	67.674	Panthera_tigris_altaica
ENSCSEG00000002374	srpra	100	67.474	ENSPTRG00000028360	SRPRA	100	67.625	Pan_troglodytes
ENSCSEG00000002374	srpra	100	68.030	ENSPANG00000010858	SRPRA	100	68.030	Papio_anubis
ENSCSEG00000002374	srpra	100	76.712	ENSPKIG00000016106	srpra	100	75.951	Paramormyrops_kingsleyae
ENSCSEG00000002374	srpra	94	69.903	ENSPSIG00000012009	SRPRA	100	69.342	Pelodiscus_sinensis
ENSCSEG00000002374	srpra	100	81.985	ENSPMGG00000001393	srpra	100	81.679	Periophthalmus_magnuspinnatus
ENSCSEG00000002374	srpra	100	68.085	ENSPEMG00000018279	Srpr	100	67.325	Peromyscus_maniculatus_bairdii
ENSCSEG00000002374	srpra	99	62.107	ENSPMAG00000009559	srpra	99	61.774	Petromyzon_marinus
ENSCSEG00000002374	srpra	100	67.414	ENSPCIG00000010207	SRPRA	100	67.830	Phascolarctos_cinereus
ENSCSEG00000002374	srpra	100	84.839	ENSPFOG00000003114	srpra	100	85.145	Poecilia_formosa
ENSCSEG00000002374	srpra	100	84.686	ENSPLAG00000007323	srpra	100	85.145	Poecilia_latipinna
ENSCSEG00000002374	srpra	100	84.992	ENSPMEG00000015658	srpra	100	85.299	Poecilia_mexicana
ENSCSEG00000002374	srpra	100	84.380	ENSPREG00000004937	srpra	100	84.839	Poecilia_reticulata
ENSCSEG00000002374	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSCSEG00000002374	srpra	61	90.698	ENSPCAG00000003801	-	61	90.698	Procavia_capensis
ENSCSEG00000002374	srpra	100	67.466	ENSPCOG00000025726	SRPRA	100	68.182	Propithecus_coquereli
ENSCSEG00000002374	srpra	100	68.389	ENSPVAG00000000993	SRPRA	100	68.230	Pteropus_vampyrus
ENSCSEG00000002374	srpra	100	83.920	ENSPNYG00000012371	srpra	100	84.227	Pundamilia_nyererei
ENSCSEG00000002374	srpra	100	78.387	ENSPNAG00000013476	srpra	100	77.930	Pygocentrus_nattereri
ENSCSEG00000002374	srpra	100	67.776	ENSRNOG00000010543	Srpra	100	67.325	Rattus_norvegicus
ENSCSEG00000002374	srpra	100	68.429	ENSRBIG00000008702	SRPRA	100	68.030	Rhinopithecus_bieti
ENSCSEG00000002374	srpra	100	68.230	ENSRROG00000029494	SRPRA	100	68.230	Rhinopithecus_roxellana
ENSCSEG00000002374	srpra	54	41.570	YDR292C	-	52	41.818	Saccharomyces_cerevisiae
ENSCSEG00000002374	srpra	100	67.576	ENSSBOG00000035892	SRPRA	100	67.576	Saimiri_boliviensis_boliviensis
ENSCSEG00000002374	srpra	94	67.095	ENSSHAG00000009168	SRPRA	100	66.722	Sarcophilus_harrisii
ENSCSEG00000002374	srpra	100	75.822	ENSSFOG00015008837	srpra	100	77.138	Scleropages_formosus
ENSCSEG00000002374	srpra	100	83.089	ENSSMAG00000002783	srpra	100	83.089	Scophthalmus_maximus
ENSCSEG00000002374	srpra	100	88.685	ENSSDUG00000013920	srpra	100	85.526	Seriola_dumerili
ENSCSEG00000002374	srpra	100	88.379	ENSSLDG00000008601	srpra	93	88.379	Seriola_lalandi_dorsalis
ENSCSEG00000002374	srpra	82	80.488	ENSSARG00000012434	SRPRA	86	80.488	Sorex_araneus
ENSCSEG00000002374	srpra	100	67.830	ENSSPUG00000018221	SRPRA	100	67.576	Sphenodon_punctatus
ENSCSEG00000002374	srpra	100	87.176	ENSSPAG00000005103	srpra	100	87.939	Stegastes_partitus
ENSCSEG00000002374	srpra	100	68.333	ENSSSCG00000015227	SRPRA	100	68.333	Sus_scrofa
ENSCSEG00000002374	srpra	94	67.532	ENSTGUG00000000815	SRPRA	100	67.524	Taeniopygia_guttata
ENSCSEG00000002374	srpra	100	82.488	ENSTRUG00000006856	srpra	100	82.488	Takifugu_rubripes
ENSCSEG00000002374	srpra	100	77.861	ENSTNIG00000010316	srpra	100	77.711	Tetraodon_nigroviridis
ENSCSEG00000002374	srpra	100	68.533	ENSTTRG00000001558	SRPRA	100	67.576	Tursiops_truncatus
ENSCSEG00000002374	srpra	100	68.326	ENSUAMG00000005510	SRPRA	100	67.171	Ursus_americanus
ENSCSEG00000002374	srpra	96	62.382	ENSUMAG00000002269	SRPRA	100	62.939	Ursus_maritimus
ENSCSEG00000002374	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSCSEG00000002374	srpra	100	68.182	ENSVVUG00000020094	SRPRA	100	68.182	Vulpes_vulpes
ENSCSEG00000002374	srpra	100	63.293	ENSXETG00000003920	srpra	100	63.293	Xenopus_tropicalis
ENSCSEG00000002374	srpra	89	88.636	ENSXCOG00000001286	srpra	100	93.051	Xiphophorus_couchianus
ENSCSEG00000002374	srpra	100	85.299	ENSXMAG00000028401	srpra	100	85.299	Xiphophorus_maculatus