EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002445 (Gene tree)
Gene ID: 103377669
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4370 bases
Position: chr4:2104820-2109189
Accession: 103377669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000003731	HARE-HTH	PF05066.13	1.3e-15	1	1
ENSCSEP00000003735	HARE-HTH	PF05066.13	4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003784	-	1780	XM_008308554	ENSCSEP00000003735	522 (aa)	XP_008306776	UPI0004957648
ENSCSET00000003780	-	1843	XM_008308553	ENSCSEP00000003731	543 (aa)	XP_008306775	UPI000496A05C

Gene Model

Click here to download ENSCSEG00000002445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002445	tbrg1	100	88.278	ENSAPOG00000017352	tbrg1	100	87.729	Acanthochromis_polyacanthus
ENSCSEG00000002445	tbrg1	97	81.168	ENSACIG00000021274	tbrg1	94	83.929	Amphilophus_citrinellus
ENSCSEG00000002445	tbrg1	100	87.729	ENSAOCG00000018605	tbrg1	100	87.179	Amphiprion_ocellaris
ENSCSEG00000002445	tbrg1	100	87.729	ENSAPEG00000022443	tbrg1	100	87.179	Amphiprion_percula
ENSCSEG00000002445	tbrg1	100	87.729	ENSATEG00000023537	tbrg1	100	87.729	Anabas_testudineus
ENSCSEG00000002445	tbrg1	100	86.081	ENSACLG00000000281	tbrg1	100	85.165	Astatotilapia_calliptera
ENSCSEG00000002445	tbrg1	98	70.818	ENSAMXG00000008381	tbrg1	97	70.074	Astyanax_mexicanus
ENSCSEG00000002445	tbrg1	100	79.927	ENSCVAG00000019626	tbrg1	100	79.927	Cyprinodon_variegatus
ENSCSEG00000002445	tbrg1	94	74.269	ENSDARG00000074996	tbrg1	93	74.074	Danio_rerio
ENSCSEG00000002445	tbrg1	91	47.977	ENSEBUG00000014060	tbrg1	90	48.062	Eptatretus_burgeri
ENSCSEG00000002445	tbrg1	99	76.182	ENSELUG00000017458	tbrg1	99	76.182	Esox_lucius
ENSCSEG00000002445	tbrg1	87	77.339	ENSFHEG00000004283	tbrg1	92	77.339	Fundulus_heteroclitus
ENSCSEG00000002445	tbrg1	100	80.328	ENSGAFG00000000204	tbrg1	100	80.328	Gambusia_affinis
ENSCSEG00000002445	tbrg1	100	86.081	ENSHBUG00000004935	tbrg1	100	85.165	Haplochromis_burtoni
ENSCSEG00000002445	tbrg1	100	75.543	ENSHCOG00000010588	tbrg1	100	75.543	Hippocampus_comes
ENSCSEG00000002445	tbrg1	92	73.559	ENSIPUG00000008697	tbrg1	93	74.403	Ictalurus_punctatus
ENSCSEG00000002445	tbrg1	100	81.901	ENSKMAG00000002775	tbrg1	100	81.502	Kryptolebias_marmoratus
ENSCSEG00000002445	tbrg1	99	84.771	ENSLBEG00000017559	tbrg1	94	85.516	Labrus_bergylta
ENSCSEG00000002445	tbrg1	99	72.943	ENSLOCG00000003093	tbrg1	98	72.029	Lepisosteus_oculatus
ENSCSEG00000002445	tbrg1	100	87.546	ENSMAMG00000000876	tbrg1	100	86.813	Mastacembelus_armatus
ENSCSEG00000002445	tbrg1	100	85.897	ENSMZEG00005013545	tbrg1	92	84.982	Maylandia_zebra
ENSCSEG00000002445	tbrg1	93	80.990	ENSMMOG00000005314	tbrg1	92	81.188	Mola_mola
ENSCSEG00000002445	tbrg1	94	86.497	ENSMALG00000011630	tbrg1	99	85.714	Monopterus_albus
ENSCSEG00000002445	tbrg1	98	85.393	ENSNBRG00000017490	tbrg1	100	84.457	Neolamprologus_brichardi
ENSCSEG00000002445	tbrg1	100	86.813	ENSONIG00000005284	tbrg1	100	85.897	Oreochromis_niloticus
ENSCSEG00000002445	tbrg1	100	78.899	ENSORLG00000014519	tbrg1	100	79.817	Oryzias_latipes
ENSCSEG00000002445	tbrg1	100	78.349	ENSORLG00020009567	tbrg1	100	79.266	Oryzias_latipes_hni
ENSCSEG00000002445	tbrg1	100	78.532	ENSORLG00015000448	tbrg1	100	79.450	Oryzias_latipes_hsok
ENSCSEG00000002445	tbrg1	100	80.367	ENSOMEG00000006130	tbrg1	100	81.101	Oryzias_melastigma
ENSCSEG00000002445	tbrg1	95	71.042	ENSPKIG00000012274	tbrg1	89	70.656	Paramormyrops_kingsleyae
ENSCSEG00000002445	tbrg1	100	79.235	ENSPMGG00000015968	tbrg1	100	79.599	Periophthalmus_magnuspinnatus
ENSCSEG00000002445	tbrg1	100	80.146	ENSPFOG00000004279	tbrg1	100	80.909	Poecilia_formosa
ENSCSEG00000002445	tbrg1	100	79.964	ENSPLAG00000001227	tbrg1	100	80.727	Poecilia_latipinna
ENSCSEG00000002445	tbrg1	100	79.964	ENSPMEG00000000955	tbrg1	100	80.727	Poecilia_mexicana
ENSCSEG00000002445	tbrg1	100	79.417	ENSPREG00000005246	tbrg1	100	80.182	Poecilia_reticulata
ENSCSEG00000002445	tbrg1	87	85.146	ENSPNYG00000012625	tbrg1	100	84.100	Pundamilia_nyererei
ENSCSEG00000002445	tbrg1	99	71.898	ENSPNAG00000028332	tbrg1	99	71.168	Pygocentrus_nattereri
ENSCSEG00000002445	tbrg1	92	74.951	ENSSFOG00015009308	tbrg1	86	74.951	Scleropages_formosus
ENSCSEG00000002445	tbrg1	100	85.558	ENSSMAG00000002529	tbrg1	100	85.558	Scophthalmus_maximus
ENSCSEG00000002445	tbrg1	99	90.092	ENSSDUG00000013674	tbrg1	99	90.092	Seriola_dumerili
ENSCSEG00000002445	tbrg1	93	89.648	ENSSLDG00000008932	tbrg1	98	88.672	Seriola_lalandi_dorsalis
ENSCSEG00000002445	tbrg1	86	87.768	ENSSPAG00000004808	tbrg1	99	86.910	Stegastes_partitus
ENSCSEG00000002445	tbrg1	95	81.977	ENSTRUG00000005960	tbrg1	98	81.977	Takifugu_rubripes
ENSCSEG00000002445	tbrg1	100	80.545	ENSXMAG00000001551	tbrg1	100	80.545	Xiphophorus_maculatus