EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002469 (Gene tree)
Gene ID: 103382225
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6527 bases
Position: chr8:14631184-14637710
Accession: 103382225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000003792	AARP2CN	PF08142.12	3.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003841	-	3657	XM_008314942	ENSCSEP00000003792	1218 (aa)	XP_008313164	-

Gene Model

Click here to download ENSCSEG00000002469's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002469	bms1	50	68.882	ENSG00000165733	BMS1	82	73.474	Homo_sapiens
ENSCSEG00000002469	bms1	88	74.797	ENSAPOG00000002296	bms1	100	75.410	Acanthochromis_polyacanthus
ENSCSEG00000002469	bms1	50	68.720	ENSAMEG00000016834	BMS1	81	73.427	Ailuropoda_melanoleuca
ENSCSEG00000002469	bms1	100	74.940	ENSACIG00000002588	bms1	61	72.959	Amphilophus_citrinellus
ENSCSEG00000002469	bms1	99	78.094	ENSAOCG00000018088	bms1	99	78.125	Amphiprion_ocellaris
ENSCSEG00000002469	bms1	50	81.920	ENSAPEG00000014673	bms1	100	76.757	Amphiprion_percula
ENSCSEG00000002469	bms1	50	81.310	ENSATEG00000023465	bms1	100	77.564	Anabas_testudineus
ENSCSEG00000002469	bms1	98	66.614	ENSACAG00000004537	-	82	72.897	Anolis_carolinensis
ENSCSEG00000002469	bms1	50	67.311	ENSANAG00000023432	BMS1	82	73.302	Aotus_nancymaae
ENSCSEG00000002469	bms1	100	75.100	ENSACLG00000001294	bms1	100	75.160	Astatotilapia_calliptera
ENSCSEG00000002469	bms1	50	74.799	ENSAMXG00000011236	bms1	99	68.316	Astyanax_mexicanus
ENSCSEG00000002469	bms1	99	61.923	ENSBTAG00000012878	BMS1	81	73.709	Bos_taurus
ENSCSEG00000002469	bms1	82	54.094	WBGene00022021	Y61A9LA.10	92	56.989	Caenorhabditis_elegans
ENSCSEG00000002469	bms1	50	68.455	ENSCJAG00000021705	BMS1	82	73.770	Callithrix_jacchus
ENSCSEG00000002469	bms1	50	68.831	ENSCAFG00000007114	BMS1	88	67.799	Canis_familiaris
ENSCSEG00000002469	bms1	50	68.831	ENSCAFG00020025282	BMS1	88	67.799	Canis_lupus_dingo
ENSCSEG00000002469	bms1	99	61.905	ENSCHIG00000023251	BMS1	81	73.131	Capra_hircus
ENSCSEG00000002469	bms1	99	58.014	ENSCAPG00000008652	BMS1	81	72.066	Cavia_aperea
ENSCSEG00000002469	bms1	99	61.142	ENSCPOG00000000502	BMS1	89	67.045	Cavia_porcellus
ENSCSEG00000002469	bms1	50	68.167	ENSCATG00000030625	-	82	73.474	Cercocebus_atys
ENSCSEG00000002469	bms1	69	58.093	ENSCATG00000008695	-	69	58.465	Cercocebus_atys
ENSCSEG00000002469	bms1	99	61.146	ENSCLAG00000002446	BMS1	81	73.302	Chinchilla_lanigera
ENSCSEG00000002469	bms1	50	68.328	ENSCSAG00000011118	BMS1	82	73.709	Chlorocebus_sabaeus
ENSCSEG00000002469	bms1	94	67.258	ENSCPBG00000025581	BMS1	80	75.176	Chrysemys_picta_bellii
ENSCSEG00000002469	bms1	81	60.880	ENSCING00000003181	-	98	60.048	Ciona_intestinalis
ENSCSEG00000002469	bms1	72	53.864	ENSCSAVG00000004113	-	93	50.826	Ciona_savignyi
ENSCSEG00000002469	bms1	50	68.218	ENSCANG00000011609	BMS1	82	73.474	Colobus_angolensis_palliatus
ENSCSEG00000002469	bms1	59	60.027	ENSCGRG00001019461	Bms1	82	74.118	Cricetulus_griseus_chok1gshd
ENSCSEG00000002469	bms1	59	60.027	ENSCGRG00000009016	Bms1	82	74.118	Cricetulus_griseus_crigri
ENSCSEG00000002469	bms1	100	76.252	ENSCVAG00000008371	bms1	100	76.171	Cyprinodon_variegatus
ENSCSEG00000002469	bms1	99	69.683	ENSDARG00000054154	bms1	99	69.769	Danio_rerio
ENSCSEG00000002469	bms1	99	61.175	ENSDNOG00000015761	BMS1	81	73.832	Dasypus_novemcinctus
ENSCSEG00000002469	bms1	99	62.765	ENSDORG00000002982	Bms1	82	73.536	Dipodomys_ordii
ENSCSEG00000002469	bms1	81	60.000	FBgn0036686	CG7728	92	58.852	Drosophila_melanogaster
ENSCSEG00000002469	bms1	50	68.831	ENSEASG00005006894	BMS1	81	73.302	Equus_asinus_asinus
ENSCSEG00000002469	bms1	50	68.669	ENSECAG00000001358	BMS1	88	68.182	Equus_caballus
ENSCSEG00000002469	bms1	99	71.303	ENSELUG00000001756	bms1	99	71.533	Esox_lucius
ENSCSEG00000002469	bms1	93	73.733	ENSFCAG00000011220	BMS1	87	67.967	Felis_catus
ENSCSEG00000002469	bms1	93	68.871	ENSFALG00000006882	BMS1	88	67.681	Ficedula_albicollis
ENSCSEG00000002469	bms1	100	75.527	ENSFHEG00000003367	bms1	100	75.446	Fundulus_heteroclitus
ENSCSEG00000002469	bms1	99	69.483	ENSGMOG00000000718	bms1	53	77.778	Gadus_morhua
ENSCSEG00000002469	bms1	50	70.227	ENSGALG00000002624	BMS1	87	69.355	Gallus_gallus
ENSCSEG00000002469	bms1	97	80.288	ENSGACG00000015334	bms1	90	80.288	Gasterosteus_aculeatus
ENSCSEG00000002469	bms1	95	68.954	ENSGAGG00000003467	BMS1	82	74.239	Gopherus_agassizii
ENSCSEG00000002469	bms1	100	75.020	ENSHBUG00000022628	bms1	100	75.080	Haplochromis_burtoni
ENSCSEG00000002469	bms1	99	74.979	ENSHCOG00000017604	bms1	99	75.475	Hippocampus_comes
ENSCSEG00000002469	bms1	99	70.133	ENSIPUG00000017855	bms1	99	71.258	Ictalurus_punctatus
ENSCSEG00000002469	bms1	50	68.567	ENSSTOG00000015063	BMS1	81	74.005	Ictidomys_tridecemlineatus
ENSCSEG00000002469	bms1	50	68.395	ENSJJAG00000017328	Bms1	82	73.302	Jaculus_jaculus
ENSCSEG00000002469	bms1	66	69.438	ENSKMAG00000021982	bms1	95	69.365	Kryptolebias_marmoratus
ENSCSEG00000002469	bms1	100	73.646	ENSLBEG00000028208	bms1	100	75.159	Labrus_bergylta
ENSCSEG00000002469	bms1	50	59.365	ENSLACG00000001600	BMS1	89	64.355	Latimeria_chalumnae
ENSCSEG00000002469	bms1	51	73.344	ENSLOCG00000012914	bms1	99	68.660	Lepisosteus_oculatus
ENSCSEG00000002469	bms1	50	67.370	ENSLAFG00000006250	BMS1	81	73.302	Loxodonta_africana
ENSCSEG00000002469	bms1	86	66.226	ENSMFAG00000037771	BMS1	88	73.709	Macaca_fascicularis
ENSCSEG00000002469	bms1	66	58.950	ENSMLEG00000029084	-	70	57.857	Mandrillus_leucophaeus
ENSCSEG00000002469	bms1	100	75.279	ENSMAMG00000020855	bms1	100	75.301	Mastacembelus_armatus
ENSCSEG00000002469	bms1	100	75.020	ENSMZEG00005005663	bms1	100	75.080	Maylandia_zebra
ENSCSEG00000002469	bms1	50	69.355	ENSMGAG00000001170	BMS1	87	69.355	Meleagris_gallopavo
ENSCSEG00000002469	bms1	98	61.388	ENSMAUG00000002195	Bms1	82	73.598	Mesocricetus_auratus
ENSCSEG00000002469	bms1	50	67.480	ENSMICG00000009977	BMS1	81	73.536	Microcebus_murinus
ENSCSEG00000002469	bms1	94	67.370	ENSMOCG00000002038	Bms1	81	73.176	Microtus_ochrogaster
ENSCSEG00000002469	bms1	100	76.705	ENSMMOG00000000977	bms1	100	76.241	Mola_mola
ENSCSEG00000002469	bms1	99	61.308	ENSMODG00000001177	BMS1	80	74.941	Monodelphis_domestica
ENSCSEG00000002469	bms1	100	75.813	ENSMALG00000009680	bms1	99	75.040	Monopterus_albus
ENSCSEG00000002469	bms1	78	67.437	MGP_CAROLIEiJ_G0028785	-	75	75.315	Mus_caroli
ENSCSEG00000002469	bms1	98	60.573	MGP_SPRETEiJ_G0029816	Bms1	82	73.412	Mus_spretus
ENSCSEG00000002469	bms1	50	69.707	ENSMPUG00000017276	BMS1	88	68.730	Mustela_putorius_furo
ENSCSEG00000002469	bms1	99	61.604	ENSMLUG00000003260	BMS1	88	67.590	Myotis_lucifugus
ENSCSEG00000002469	bms1	86	68.130	ENSNGAG00000015258	Bms1	83	67.317	Nannospalax_galili
ENSCSEG00000002469	bms1	50	66.613	ENSNLEG00000015791	BMS1	81	73.474	Nomascus_leucogenys
ENSCSEG00000002469	bms1	82	75.309	ENSOPRG00000005195	BMS1	80	74.384	Ochotona_princeps
ENSCSEG00000002469	bms1	100	75.939	ENSONIG00000007227	bms1	100	75.522	Oreochromis_niloticus
ENSCSEG00000002469	bms1	99	60.883	ENSOANG00000000662	-	81	73.364	Ornithorhynchus_anatinus
ENSCSEG00000002469	bms1	50	68.558	ENSOCUG00000005354	BMS1	81	72.664	Oryctolagus_cuniculus
ENSCSEG00000002469	bms1	50	80.480	ENSORLG00000014655	bms1	99	76.245	Oryzias_latipes
ENSCSEG00000002469	bms1	99	76.729	ENSORLG00020016246	bms1	99	76.708	Oryzias_latipes_hni
ENSCSEG00000002469	bms1	99	76.404	ENSORLG00015014183	bms1	99	76.740	Oryzias_latipes_hsok
ENSCSEG00000002469	bms1	99	75.580	ENSOMEG00000015042	bms1	99	76.059	Oryzias_melastigma
ENSCSEG00000002469	bms1	99	61.305	ENSOGAG00000006511	BMS1	87	67.476	Otolemur_garnettii
ENSCSEG00000002469	bms1	99	61.712	ENSOARG00000003900	BMS1	81	72.454	Ovis_aries
ENSCSEG00000002469	bms1	50	63.430	ENSPPAG00000027837	BMS1	81	73.474	Pan_paniscus
ENSCSEG00000002469	bms1	99	61.820	ENSPPRG00000001311	BMS1	87	67.967	Panthera_pardus
ENSCSEG00000002469	bms1	99	60.917	ENSPTIG00000009652	BMS1	81	73.536	Panthera_tigris_altaica
ENSCSEG00000002469	bms1	50	68.910	ENSPTRG00000002441	BMS1	82	73.474	Pan_troglodytes
ENSCSEG00000002469	bms1	85	80.645	ENSPKIG00000008165	bms1	87	73.927	Paramormyrops_kingsleyae
ENSCSEG00000002469	bms1	92	68.167	ENSPSIG00000006481	BMS1	82	75.176	Pelodiscus_sinensis
ENSCSEG00000002469	bms1	85	73.903	ENSPCIG00000001339	BMS1	80	74.232	Phascolarctos_cinereus
ENSCSEG00000002469	bms1	99	72.297	ENSPFOG00000015180	bms1	59	81.169	Poecilia_formosa
ENSCSEG00000002469	bms1	50	80.227	ENSPREG00000002695	bms1	52	81.037	Poecilia_reticulata
ENSCSEG00000002469	bms1	71	74.830	ENSPCAG00000014528	BMS1	69	73.239	Procavia_capensis
ENSCSEG00000002469	bms1	100	76.048	ENSPNYG00000018866	bms1	100	75.608	Pundamilia_nyererei
ENSCSEG00000002469	bms1	50	76.518	ENSPNAG00000000676	bms1	99	70.063	Pygocentrus_nattereri
ENSCSEG00000002469	bms1	50	68.058	ENSRROG00000040101	BMS1	81	69.953	Rhinopithecus_roxellana
ENSCSEG00000002469	bms1	73	47.748	YPL217C	-	78	48.946	Saccharomyces_cerevisiae
ENSCSEG00000002469	bms1	99	59.478	ENSSHAG00000005062	BMS1	80	74.239	Sarcophilus_harrisii
ENSCSEG00000002469	bms1	50	77.184	ENSSFOG00015022313	bms1	50	77.184	Scleropages_formosus
ENSCSEG00000002469	bms1	100	76.232	ENSSMAG00000019966	bms1	100	77.928	Scophthalmus_maximus
ENSCSEG00000002469	bms1	50	82.258	ENSSDUG00000016875	bms1	90	78.648	Seriola_dumerili
ENSCSEG00000002469	bms1	50	82.419	ENSSLDG00000015199	bms1	100	77.902	Seriola_lalandi_dorsalis
ENSCSEG00000002469	bms1	50	68.618	ENSSPUG00000014454	BMS1	80	74.178	Sphenodon_punctatus
ENSCSEG00000002469	bms1	50	69.044	ENSSSCG00000010198	BMS1	88	68.831	Sus_scrofa
ENSCSEG00000002469	bms1	93	69.256	ENSTGUG00000006302	-	88	68.242	Taeniopygia_guttata
ENSCSEG00000002469	bms1	99	68.613	ENSTRUG00000008028	bms1	53	71.683	Takifugu_rubripes
ENSCSEG00000002469	bms1	99	65.536	ENSTNIG00000006216	bms1	82	81.455	Tetraodon_nigroviridis
ENSCSEG00000002469	bms1	62	70.648	ENSTBEG00000001673	-	62	70.280	Tupaia_belangeri
ENSCSEG00000002469	bms1	99	61.527	ENSTTRG00000007983	BMS1	79	76.456	Tursiops_truncatus
ENSCSEG00000002469	bms1	50	69.381	ENSUAMG00000023996	BMS1	89	67.903	Ursus_americanus
ENSCSEG00000002469	bms1	50	69.055	ENSUMAG00000016523	BMS1	88	68.078	Ursus_maritimus
ENSCSEG00000002469	bms1	50	63.149	ENSVPAG00000007477	BMS1	54	62.662	Vicugna_pacos
ENSCSEG00000002469	bms1	50	68.831	ENSVVUG00000021305	BMS1	88	67.799	Vulpes_vulpes
ENSCSEG00000002469	bms1	98	60.032	ENSXETG00000008158	bms1	86	72.577	Xenopus_tropicalis
ENSCSEG00000002469	bms1	99	75.102	ENSXCOG00000000506	bms1	93	88.010	Xiphophorus_couchianus
ENSCSEG00000002469	bms1	99	74.290	ENSXMAG00000014236	bms1	99	74.209	Xiphophorus_maculatus