EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002516 (Gene tree)
Gene ID: 103385898
Gene Symbol: rad18
Alias: zgc:55577
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 22557 bases
Position: chr11:3090999-3113555
Accession: 103385898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000003863	SAP	PF02037.27	9.3e-08	1	1
ENSCSEP00000003859	SAP	PF02037.27	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003908	-	3455	XM_008319922	ENSCSEP00000003859	507 (aa)	XP_008318144	UPI000496A1A0
ENSCSET00000003910	-	1248	-	ENSCSEP00000003863	415 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000002516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002516	rad18	88	43.672	ENSG00000070950	RAD18	100	59.341	Homo_sapiens
ENSCSEG00000002516	rad18	96	63.314	ENSAPOG00000005260	rad18	96	63.400	Acanthochromis_polyacanthus
ENSCSEG00000002516	rad18	77	46.260	ENSAMEG00000012375	RAD18	63	46.260	Ailuropoda_melanoleuca
ENSCSEG00000002516	rad18	71	60.963	ENSACIG00000020655	rad18	88	60.963	Amphilophus_citrinellus
ENSCSEG00000002516	rad18	95	65.000	ENSAOCG00000004507	rad18	99	65.000	Amphiprion_ocellaris
ENSCSEG00000002516	rad18	95	64.471	ENSAPEG00000016837	rad18	99	64.471	Amphiprion_percula
ENSCSEG00000002516	rad18	84	43.108	ENSAPLG00000003138	RAD18	84	43.108	Anas_platyrhynchos
ENSCSEG00000002516	rad18	88	43.176	ENSANAG00000033360	RAD18	81	43.176	Aotus_nancymaae
ENSCSEG00000002516	rad18	96	61.600	ENSACLG00000023506	rad18	100	61.600	Astatotilapia_calliptera
ENSCSEG00000002516	rad18	94	53.333	ENSAMXG00000002534	rad18	100	53.796	Astyanax_mexicanus
ENSCSEG00000002516	rad18	78	45.961	ENSBTAG00000012142	RAD18	78	47.075	Bos_taurus
ENSCSEG00000002516	rad18	99	40.426	ENSCJAG00000040303	RAD18	84	43.424	Callithrix_jacchus
ENSCSEG00000002516	rad18	78	46.556	ENSCAFG00000005548	RAD18	71	48.485	Canis_familiaris
ENSCSEG00000002516	rad18	78	46.556	ENSCAFG00020009228	RAD18	71	48.485	Canis_lupus_dingo
ENSCSEG00000002516	rad18	93	42.721	ENSCHIG00000007965	RAD18	94	46.853	Capra_hircus
ENSCSEG00000002516	rad18	86	42.199	ENSTSYG00000012189	RAD18	79	42.518	Carlito_syrichta
ENSCSEG00000002516	rad18	94	36.640	ENSCAPG00000000356	RAD18	77	42.771	Cavia_aperea
ENSCSEG00000002516	rad18	78	45.125	ENSCPOG00000013890	RAD18	71	45.480	Cavia_porcellus
ENSCSEG00000002516	rad18	88	42.680	ENSCCAG00000022920	RAD18	81	42.680	Cebus_capucinus
ENSCSEG00000002516	rad18	88	45.409	ENSCATG00000039277	RAD18	82	43.692	Cercocebus_atys
ENSCSEG00000002516	rad18	78	45.682	ENSCLAG00000003652	RAD18	72	45.682	Chinchilla_lanigera
ENSCSEG00000002516	rad18	83	45.288	ENSCSAG00000010783	RAD18	78	44.496	Chlorocebus_sabaeus
ENSCSEG00000002516	rad18	92	40.596	ENSCPBG00000014787	RAD18	93	40.950	Chrysemys_picta_bellii
ENSCSEG00000002516	rad18	83	45.812	ENSCANG00000007308	RAD18	80	44.860	Colobus_angolensis_palliatus
ENSCSEG00000002516	rad18	83	42.298	ENSCGRG00001010209	-	76	42.298	Cricetulus_griseus_chok1gshd
ENSCSEG00000002516	rad18	83	43.684	ENSCGRG00001018154	-	79	44.382	Cricetulus_griseus_chok1gshd
ENSCSEG00000002516	rad18	83	43.684	ENSCGRG00000007283	-	79	44.382	Cricetulus_griseus_crigri
ENSCSEG00000002516	rad18	83	42.298	ENSCGRG00000019636	-	76	42.298	Cricetulus_griseus_crigri
ENSCSEG00000002516	rad18	84	57.632	ENSDARG00000027938	rad18	98	55.245	Danio_rerio
ENSCSEG00000002516	rad18	90	43.066	ENSDNOG00000040055	RAD18	81	43.765	Dasypus_novemcinctus
ENSCSEG00000002516	rad18	93	41.920	ENSDORG00000001099	Rad18	88	41.920	Dipodomys_ordii
ENSCSEG00000002516	rad18	70	39.722	ENSETEG00000002268	RAD18	75	39.722	Echinops_telfairi
ENSCSEG00000002516	rad18	90	44.146	ENSEASG00005013316	RAD18	76	44.146	Equus_asinus_asinus
ENSCSEG00000002516	rad18	83	46.457	ENSECAG00000010746	RAD18	74	46.457	Equus_caballus
ENSCSEG00000002516	rad18	51	61.798	ENSEEUG00000000236	-	71	41.840	Erinaceus_europaeus
ENSCSEG00000002516	rad18	95	51.697	ENSELUG00000000733	rad18	88	55.402	Esox_lucius
ENSCSEG00000002516	rad18	84	44.186	ENSFCAG00000025747	RAD18	76	45.478	Felis_catus
ENSCSEG00000002516	rad18	94	42.529	ENSFALG00000013625	RAD18	99	42.529	Ficedula_albicollis
ENSCSEG00000002516	rad18	93	43.192	ENSFDAG00000009907	RAD18	89	42.035	Fukomys_damarensis
ENSCSEG00000002516	rad18	85	44.361	ENSGALG00000008368	RAD18	80	44.361	Gallus_gallus
ENSCSEG00000002516	rad18	93	60.890	ENSGACG00000000920	rad18	100	60.934	Gasterosteus_aculeatus
ENSCSEG00000002516	rad18	56	65.714	ENSGAGG00000005184	RAD18	67	65.714	Gopherus_agassizii
ENSCSEG00000002516	rad18	88	44.417	ENSGGOG00000008391	RAD18	81	44.417	Gorilla_gorilla
ENSCSEG00000002516	rad18	94	59.406	ENSHBUG00000013322	rad18	100	59.406	Haplochromis_burtoni
ENSCSEG00000002516	rad18	65	45.545	ENSHGLG00000009196	-	97	45.545	Heterocephalus_glaber_female
ENSCSEG00000002516	rad18	65	45.545	ENSHGLG00100017675	-	97	45.545	Heterocephalus_glaber_male
ENSCSEG00000002516	rad18	94	53.828	ENSIPUG00000018681	rad18	100	52.110	Ictalurus_punctatus
ENSCSEG00000002516	rad18	64	47.651	ENSSTOG00000004870	-	96	47.651	Ictidomys_tridecemlineatus
ENSCSEG00000002516	rad18	78	46.648	ENSJJAG00000001484	Rad18	79	46.648	Jaculus_jaculus
ENSCSEG00000002516	rad18	96	62.028	ENSKMAG00000020725	rad18	99	62.028	Kryptolebias_marmoratus
ENSCSEG00000002516	rad18	60	45.455	ENSLACG00000018437	RAD18	95	45.455	Latimeria_chalumnae
ENSCSEG00000002516	rad18	85	55.614	ENSLOCG00000010629	rad18	98	52.668	Lepisosteus_oculatus
ENSCSEG00000002516	rad18	88	40.523	ENSLAFG00000004667	RAD18	76	45.777	Loxodonta_africana
ENSCSEG00000002516	rad18	88	46.154	ENSMFAG00000028864	RAD18	80	46.154	Macaca_fascicularis
ENSCSEG00000002516	rad18	88	45.658	ENSMMUG00000020013	RAD18	97	47.195	Macaca_mulatta
ENSCSEG00000002516	rad18	88	45.658	ENSMNEG00000013464	RAD18	80	45.658	Macaca_nemestrina
ENSCSEG00000002516	rad18	88	45.074	ENSMLEG00000014306	RAD18	80	45.074	Mandrillus_leucophaeus
ENSCSEG00000002516	rad18	89	59.916	ENSMAMG00000023936	rad18	100	59.916	Mastacembelus_armatus
ENSCSEG00000002516	rad18	96	61.200	ENSMZEG00005010577	rad18	93	61.200	Maylandia_zebra
ENSCSEG00000002516	rad18	83	42.714	ENSMGAG00000010131	RAD18	84	42.714	Meleagris_gallopavo
ENSCSEG00000002516	rad18	77	45.506	ENSMAUG00000020642	Rad18	79	45.506	Mesocricetus_auratus
ENSCSEG00000002516	rad18	90	40.488	ENSMICG00000013536	RAD18	79	43.878	Microcebus_murinus
ENSCSEG00000002516	rad18	78	46.779	ENSMOCG00000009114	Rad18	79	46.045	Microtus_ochrogaster
ENSCSEG00000002516	rad18	71	65.054	ENSMMOG00000021793	rad18	97	65.054	Mola_mola
ENSCSEG00000002516	rad18	84	44.216	ENSMODG00000004679	RAD18	74	44.473	Monodelphis_domestica
ENSCSEG00000002516	rad18	78	46.429	MGP_CAROLIEiJ_G0028712	Rad18	98	45.955	Mus_caroli
ENSCSEG00000002516	rad18	78	45.856	ENSMUSG00000030254	Rad18	98	45.277	Mus_musculus
ENSCSEG00000002516	rad18	78	45.682	MGP_PahariEiJ_G0022463	Rad18	98	44.737	Mus_pahari
ENSCSEG00000002516	rad18	78	45.856	MGP_SPRETEiJ_G0029740	Rad18	98	45.277	Mus_spretus
ENSCSEG00000002516	rad18	78	48.209	ENSMPUG00000017063	RAD18	71	48.209	Mustela_putorius_furo
ENSCSEG00000002516	rad18	78	45.604	ENSMLUG00000016494	RAD18	71	46.409	Myotis_lucifugus
ENSCSEG00000002516	rad18	75	47.399	ENSNGAG00000012464	Rad18	80	47.399	Nannospalax_galili
ENSCSEG00000002516	rad18	71	60.647	ENSNBRG00000004794	rad18	97	60.647	Neolamprologus_brichardi
ENSCSEG00000002516	rad18	88	43.781	ENSNLEG00000003789	RAD18	81	43.781	Nomascus_leucogenys
ENSCSEG00000002516	rad18	54	45.683	ENSMEUG00000003444	-	61	45.850	Notamacropus_eugenii
ENSCSEG00000002516	rad18	88	45.387	ENSOPRG00000013856	RAD18	81	45.387	Ochotona_princeps
ENSCSEG00000002516	rad18	64	45.333	ENSODEG00000018158	RAD18	97	45.333	Octodon_degus
ENSCSEG00000002516	rad18	94	62.937	ENSONIG00000018979	rad18	98	62.937	Oreochromis_niloticus
ENSCSEG00000002516	rad18	84	43.939	ENSOCUG00000000013	RAD18	79	44.366	Oryctolagus_cuniculus
ENSCSEG00000002516	rad18	75	58.011	ENSORLG00000029026	rad18	96	59.838	Oryzias_latipes
ENSCSEG00000002516	rad18	82	44.271	ENSOGAG00000001410	RAD18	75	43.799	Otolemur_garnettii
ENSCSEG00000002516	rad18	89	42.752	ENSOARG00000007445	RAD18	80	44.472	Ovis_aries
ENSCSEG00000002516	rad18	88	43.921	ENSPPAG00000035797	RAD18	81	43.921	Pan_paniscus
ENSCSEG00000002516	rad18	84	44.588	ENSPPRG00000004021	RAD18	76	45.876	Panthera_pardus
ENSCSEG00000002516	rad18	84	44.588	ENSPTIG00000008602	RAD18	76	45.876	Panthera_tigris_altaica
ENSCSEG00000002516	rad18	88	44.169	ENSPTRG00000014583	RAD18	81	44.169	Pan_troglodytes
ENSCSEG00000002516	rad18	88	44.913	ENSPANG00000008855	RAD18	80	44.913	Papio_anubis
ENSCSEG00000002516	rad18	87	41.951	ENSPSIG00000006928	RAD18	88	40.225	Pelodiscus_sinensis
ENSCSEG00000002516	rad18	70	61.420	ENSPMGG00000013294	rad18	94	61.473	Periophthalmus_magnuspinnatus
ENSCSEG00000002516	rad18	95	40.123	ENSPEMG00000022129	Rad18	89	40.329	Peromyscus_maniculatus_bairdii
ENSCSEG00000002516	rad18	95	41.913	ENSPCIG00000024872	RAD18	91	41.913	Phascolarctos_cinereus
ENSCSEG00000002516	rad18	71	65.583	ENSPFOG00000002722	rad18	98	65.583	Poecilia_formosa
ENSCSEG00000002516	rad18	88	44.169	ENSPPYG00000013688	RAD18	81	44.169	Pongo_abelii
ENSCSEG00000002516	rad18	84	34.896	ENSPCAG00000008229	RAD18	82	34.896	Procavia_capensis
ENSCSEG00000002516	rad18	84	45.170	ENSPVAG00000012220	RAD18	77	45.573	Pteropus_vampyrus
ENSCSEG00000002516	rad18	96	61.600	ENSPNYG00000006815	rad18	100	61.600	Pundamilia_nyererei
ENSCSEG00000002516	rad18	94	54.484	ENSPNAG00000016082	rad18	98	54.831	Pygocentrus_nattereri
ENSCSEG00000002516	rad18	82	41.469	ENSRNOG00000005907	Rad18	80	41.589	Rattus_norvegicus
ENSCSEG00000002516	rad18	88	43.069	ENSRBIG00000044173	RAD18	80	43.852	Rhinopithecus_bieti
ENSCSEG00000002516	rad18	88	44.389	ENSRROG00000043948	RAD18	80	45.498	Rhinopithecus_roxellana
ENSCSEG00000002516	rad18	88	43.672	ENSSBOG00000008434	-	81	43.672	Saimiri_boliviensis_boliviensis
ENSCSEG00000002516	rad18	82	41.379	ENSSHAG00000012472	-	92	41.379	Sarcophilus_harrisii
ENSCSEG00000002516	rad18	82	55.438	ENSSFOG00015019264	rad18	90	50.917	Scleropages_formosus
ENSCSEG00000002516	rad18	62	47.799	ENSSPUG00000017486	RAD18	96	47.799	Sphenodon_punctatus
ENSCSEG00000002516	rad18	96	62.525	ENSSPAG00000007165	rad18	99	62.525	Stegastes_partitus
ENSCSEG00000002516	rad18	90	40.633	ENSSSCG00000026158	RAD18	81	41.849	Sus_scrofa
ENSCSEG00000002516	rad18	74	47.564	ENSTGUG00000010405	RAD18	78	47.564	Taeniopygia_guttata
ENSCSEG00000002516	rad18	75	58.824	ENSTRUG00000003517	rad18	100	60.695	Takifugu_rubripes
ENSCSEG00000002516	rad18	78	64.873	ENSTNIG00000014625	rad18	100	64.873	Tetraodon_nigroviridis
ENSCSEG00000002516	rad18	78	44.568	ENSTTRG00000005034	RAD18	73	45.669	Tursiops_truncatus
ENSCSEG00000002516	rad18	83	43.023	ENSUMAG00000019279	RAD18	71	46.832	Ursus_maritimus
ENSCSEG00000002516	rad18	78	42.737	ENSVPAG00000002063	RAD18	78	44.847	Vicugna_pacos
ENSCSEG00000002516	rad18	78	46.556	ENSVVUG00000025318	RAD18	74	48.485	Vulpes_vulpes
ENSCSEG00000002516	rad18	75	46.459	ENSXETG00000033878	RAD18	94	46.459	Xenopus_tropicalis
ENSCSEG00000002516	rad18	71	60.705	ENSXCOG00000020018	rad18	95	60.705	Xiphophorus_couchianus
ENSCSEG00000002516	rad18	71	60.326	ENSXMAG00000001516	rad18	95	60.326	Xiphophorus_maculatus