EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002532 (Gene tree)
Gene ID: 103388241
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 8044 bases
Position: chr13:5086003-5094046
Accession: 103388241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000003891	PRP3	PF08572.10	2.9e-76	1	1
ENSCSEP00000003870	PRP3	PF08572.10	3.3e-76	1	1
ENSCSEP00000003881	PRP3	PF08572.10	3.3e-76	1	1
ENSCSEP00000003902	PRP3	PF08572.10	1.1e-74	1	1
ENSCSEP00000003902	PWI	PF01480.17	4.5e-12	1	1
ENSCSEP00000003891	PWI	PF01480.17	5.2e-12	1	1
ENSCSEP00000003870	PWI	PF01480.17	5.4e-12	1	1
ENSCSEP00000003881	PWI	PF01480.17	5.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003919	-	2544	-	ENSCSEP00000003870	719 (aa)	-	-
ENSCSET00000003930	-	2214	-	ENSCSEP00000003881	720 (aa)	-	-
ENSCSET00000003940	-	4366	XM_008323151	ENSCSEP00000003891	703 (aa)	XP_008321373	UPI00049764A7
ENSCSET00000003951	-	1896	-	ENSCSEP00000003902	631 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000002532's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002532	prpf3	99	70.605	ENSG00000117360	PRPF3	100	72.011	Homo_sapiens
ENSCSEG00000002532	prpf3	100	86.402	ENSAPOG00000015584	prpf3	100	86.864	Acanthochromis_polyacanthus
ENSCSEG00000002532	prpf3	99	70.745	ENSAMEG00000001630	PRPF3	100	72.152	Ailuropoda_melanoleuca
ENSCSEG00000002532	prpf3	100	85.915	ENSACIG00000007876	prpf3	100	86.056	Amphilophus_citrinellus
ENSCSEG00000002532	prpf3	100	90.217	ENSAOCG00000011449	prpf3	100	86.158	Amphiprion_ocellaris
ENSCSEG00000002532	prpf3	100	87.819	ENSATEG00000023583	prpf3	100	87.819	Anabas_testudineus
ENSCSEG00000002532	prpf3	99	71.871	ENSAPLG00000002440	PRPF3	100	72.394	Anas_platyrhynchos
ENSCSEG00000002532	prpf3	99	71.348	ENSACAG00000003176	PRPF3	100	72.090	Anolis_carolinensis
ENSCSEG00000002532	prpf3	99	70.605	ENSANAG00000026138	PRPF3	100	72.011	Aotus_nancymaae
ENSCSEG00000002532	prpf3	100	85.836	ENSACLG00000020127	prpf3	100	85.552	Astatotilapia_calliptera
ENSCSEG00000002532	prpf3	100	80.505	ENSAMXG00000007306	prpf3	100	80.056	Astyanax_mexicanus
ENSCSEG00000002532	prpf3	99	70.605	ENSBTAG00000013946	PRPF3	100	72.011	Bos_taurus
ENSCSEG00000002532	prpf3	87	38.298	WBGene00010844	prp-3	96	35.385	Caenorhabditis_elegans
ENSCSEG00000002532	prpf3	99	70.605	ENSCJAG00000009926	PRPF3	100	72.011	Callithrix_jacchus
ENSCSEG00000002532	prpf3	99	70.605	ENSCAFG00000011820	PRPF3	100	72.011	Canis_familiaris
ENSCSEG00000002532	prpf3	81	70.261	ENSCAFG00020019653	PRPF3	100	71.652	Canis_lupus_dingo
ENSCSEG00000002532	prpf3	99	70.605	ENSCHIG00000015434	PRPF3	100	72.011	Capra_hircus
ENSCSEG00000002532	prpf3	99	70.745	ENSTSYG00000001383	PRPF3	100	72.152	Carlito_syrichta
ENSCSEG00000002532	prpf3	79	73.307	ENSCAPG00000017812	PRPF3	95	66.556	Cavia_aperea
ENSCSEG00000002532	prpf3	99	70.605	ENSCPOG00000008068	PRPF3	100	72.011	Cavia_porcellus
ENSCSEG00000002532	prpf3	99	70.605	ENSCCAG00000026380	PRPF3	100	72.011	Cebus_capucinus
ENSCSEG00000002532	prpf3	99	58.380	ENSCATG00000041778	PRPF3	100	59.777	Cercocebus_atys
ENSCSEG00000002532	prpf3	99	70.745	ENSCLAG00000015009	PRPF3	100	72.152	Chinchilla_lanigera
ENSCSEG00000002532	prpf3	76	81.752	ENSCHOG00000011645	PRPF3	76	82.482	Choloepus_hoffmanni
ENSCSEG00000002532	prpf3	99	71.589	ENSCPBG00000008216	PRPF3	100	72.293	Chrysemys_picta_bellii
ENSCSEG00000002532	prpf3	65	59.662	ENSCING00000003312	-	99	59.662	Ciona_intestinalis
ENSCSEG00000002532	prpf3	83	51.602	ENSCSAVG00000008720	-	97	53.022	Ciona_savignyi
ENSCSEG00000002532	prpf3	99	70.042	ENSCANG00000036769	PRPF3	100	71.449	Colobus_angolensis_palliatus
ENSCSEG00000002532	prpf3	99	70.605	ENSCGRG00001019100	Prpf3	100	72.011	Cricetulus_griseus_chok1gshd
ENSCSEG00000002532	prpf3	99	70.605	ENSCGRG00000007322	Prpf3	100	72.011	Cricetulus_griseus_crigri
ENSCSEG00000002532	prpf3	100	84.419	ENSCVAG00000009318	prpf3	100	83.994	Cyprinodon_variegatus
ENSCSEG00000002532	prpf3	100	78.470	ENSDARG00000086425	prpf3	100	78.470	Danio_rerio
ENSCSEG00000002532	prpf3	99	73.570	ENSDNOG00000005904	PRPF3	100	74.498	Dasypus_novemcinctus
ENSCSEG00000002532	prpf3	93	70.651	ENSDORG00000008664	Prpf3	99	72.012	Dipodomys_ordii
ENSCSEG00000002532	prpf3	86	51.418	FBgn0036915	Prp3	99	51.805	Drosophila_melanogaster
ENSCSEG00000002532	prpf3	99	70.886	ENSETEG00000019124	PRPF3	100	72.293	Echinops_telfairi
ENSCSEG00000002532	prpf3	100	60.456	ENSEBUG00000011680	prpf3	100	60.322	Eptatretus_burgeri
ENSCSEG00000002532	prpf3	99	70.464	ENSEASG00005001566	PRPF3	100	71.871	Equus_asinus_asinus
ENSCSEG00000002532	prpf3	99	70.605	ENSECAG00000019840	PRPF3	100	72.011	Equus_caballus
ENSCSEG00000002532	prpf3	83	73.243	ENSEEUG00000007338	PRPF3	85	73.696	Erinaceus_europaeus
ENSCSEG00000002532	prpf3	100	73.840	ENSELUG00000013624	prpf3	100	73.558	Esox_lucius
ENSCSEG00000002532	prpf3	99	70.605	ENSFCAG00000013940	PRPF3	100	72.011	Felis_catus
ENSCSEG00000002532	prpf3	99	71.027	ENSFDAG00000010365	PRPF3	100	72.433	Fukomys_damarensis
ENSCSEG00000002532	prpf3	100	83.853	ENSFHEG00000021746	prpf3	100	83.853	Fundulus_heteroclitus
ENSCSEG00000002532	prpf3	100	81.073	ENSGMOG00000008535	prpf3	100	80.791	Gadus_morhua
ENSCSEG00000002532	prpf3	99	72.394	ENSGALG00000028205	PRPF3	100	72.535	Gallus_gallus
ENSCSEG00000002532	prpf3	100	83.428	ENSGAFG00000012671	prpf3	100	82.861	Gambusia_affinis
ENSCSEG00000002532	prpf3	100	85.472	ENSGACG00000011792	prpf3	100	85.190	Gasterosteus_aculeatus
ENSCSEG00000002532	prpf3	99	71.589	ENSGAGG00000013765	PRPF3	100	75.176	Gopherus_agassizii
ENSCSEG00000002532	prpf3	86	77.581	ENSGGOG00000013174	PRPF3	100	78.171	Gorilla_gorilla
ENSCSEG00000002532	prpf3	100	86.827	ENSHBUG00000003493	prpf3	100	86.544	Haplochromis_burtoni
ENSCSEG00000002532	prpf3	99	54.711	ENSHGLG00000016033	-	100	55.015	Heterocephalus_glaber_female
ENSCSEG00000002532	prpf3	99	70.745	ENSHGLG00000016569	PRPF3	100	72.152	Heterocephalus_glaber_female
ENSCSEG00000002532	prpf3	99	54.878	ENSHGLG00100008951	-	100	54.962	Heterocephalus_glaber_male
ENSCSEG00000002532	prpf3	99	70.745	ENSHGLG00100007590	PRPF3	100	72.152	Heterocephalus_glaber_male
ENSCSEG00000002532	prpf3	100	79.606	ENSHCOG00000014058	prpf3	100	80.028	Hippocampus_comes
ENSCSEG00000002532	prpf3	100	80.367	ENSIPUG00000000902	PRPF3	100	80.367	Ictalurus_punctatus
ENSCSEG00000002532	prpf3	99	70.605	ENSSTOG00000001889	PRPF3	100	72.011	Ictidomys_tridecemlineatus
ENSCSEG00000002532	prpf3	100	85.647	ENSKMAG00000001390	prpf3	100	85.647	Kryptolebias_marmoratus
ENSCSEG00000002532	prpf3	100	87.188	ENSLBEG00000026310	prpf3	100	87.188	Labrus_bergylta
ENSCSEG00000002532	prpf3	93	67.119	ENSLACG00000010541	PRPF3	100	67.421	Latimeria_chalumnae
ENSCSEG00000002532	prpf3	99	70.605	ENSLAFG00000004713	PRPF3	100	72.011	Loxodonta_africana
ENSCSEG00000002532	prpf3	99	70.605	ENSMFAG00000039791	PRPF3	100	72.011	Macaca_fascicularis
ENSCSEG00000002532	prpf3	92	70.308	ENSMMUG00000016301	PRPF3	99	71.538	Macaca_mulatta
ENSCSEG00000002532	prpf3	99	70.605	ENSMNEG00000038161	PRPF3	100	72.011	Macaca_nemestrina
ENSCSEG00000002532	prpf3	86	77.581	ENSMLEG00000040609	PRPF3	100	78.171	Mandrillus_leucophaeus
ENSCSEG00000002532	prpf3	98	49.543	ENSMLEG00000041065	-	97	49.573	Mandrillus_leucophaeus
ENSCSEG00000002532	prpf3	100	86.357	ENSMAMG00000014968	prpf3	100	86.047	Mastacembelus_armatus
ENSCSEG00000002532	prpf3	100	89.130	ENSMZEG00005015970	prpf3	100	87.539	Maylandia_zebra
ENSCSEG00000002532	prpf3	99	72.394	ENSMGAG00000000707	PRPF3	100	72.535	Meleagris_gallopavo
ENSCSEG00000002532	prpf3	99	70.464	ENSMAUG00000017112	Prpf3	100	71.871	Mesocricetus_auratus
ENSCSEG00000002532	prpf3	99	70.464	ENSMICG00000015386	PRPF3	100	74.824	Microcebus_murinus
ENSCSEG00000002532	prpf3	99	70.605	ENSMOCG00000000242	Prpf3	100	72.011	Microtus_ochrogaster
ENSCSEG00000002532	prpf3	100	81.373	ENSMMOG00000016131	prpf3	100	81.793	Mola_mola
ENSCSEG00000002532	prpf3	99	70.886	ENSMODG00000018774	PRPF3	100	72.293	Monodelphis_domestica
ENSCSEG00000002532	prpf3	100	83.711	ENSMALG00000007257	prpf3	100	83.994	Monopterus_albus
ENSCSEG00000002532	prpf3	99	70.605	MGP_CAROLIEiJ_G0025354	Prpf3	100	72.011	Mus_caroli
ENSCSEG00000002532	prpf3	99	70.605	ENSMUSG00000015748	Prpf3	100	72.011	Mus_musculus
ENSCSEG00000002532	prpf3	99	70.605	MGP_PahariEiJ_G0026798	Prpf3	100	71.871	Mus_pahari
ENSCSEG00000002532	prpf3	99	70.605	MGP_SPRETEiJ_G0026298	Prpf3	100	72.011	Mus_spretus
ENSCSEG00000002532	prpf3	99	69.565	ENSMPUG00000005080	PRPF3	100	70.547	Mustela_putorius_furo
ENSCSEG00000002532	prpf3	99	70.927	ENSMLUG00000004646	-	100	72.331	Myotis_lucifugus
ENSCSEG00000002532	prpf3	99	70.605	ENSNGAG00000000910	Prpf3	100	72.011	Nannospalax_galili
ENSCSEG00000002532	prpf3	100	87.060	ENSNBRG00000003462	prpf3	100	87.060	Neolamprologus_brichardi
ENSCSEG00000002532	prpf3	90	71.272	ENSNLEG00000009841	PRPF3	99	72.527	Nomascus_leucogenys
ENSCSEG00000002532	prpf3	83	63.717	ENSMEUG00000008733	PRPF3	89	64.307	Notamacropus_eugenii
ENSCSEG00000002532	prpf3	99	70.886	ENSOPRG00000010139	PRPF3	100	72.152	Ochotona_princeps
ENSCSEG00000002532	prpf3	99	71.127	ENSODEG00000011363	-	100	71.667	Octodon_degus
ENSCSEG00000002532	prpf3	99	54.242	ENSODEG00000014412	-	100	54.934	Octodon_degus
ENSCSEG00000002532	prpf3	100	87.074	ENSONIG00000006394	prpf3	100	87.042	Oreochromis_niloticus
ENSCSEG00000002532	prpf3	99	54.880	ENSOANG00000015441	PRPF3	100	54.866	Ornithorhynchus_anatinus
ENSCSEG00000002532	prpf3	99	70.605	ENSOCUG00000011760	PRPF3	100	72.011	Oryctolagus_cuniculus
ENSCSEG00000002532	prpf3	100	83.994	ENSORLG00000010330	prpf3	100	83.994	Oryzias_latipes
ENSCSEG00000002532	prpf3	100	84.136	ENSORLG00020009054	prpf3	100	84.136	Oryzias_latipes_hni
ENSCSEG00000002532	prpf3	100	84.278	ENSORLG00015015016	prpf3	100	84.278	Oryzias_latipes_hsok
ENSCSEG00000002532	prpf3	100	86.250	ENSOMEG00000000940	prpf3	100	86.250	Oryzias_melastigma
ENSCSEG00000002532	prpf3	99	67.321	ENSOGAG00000005352	PRPF3	100	68.724	Otolemur_garnettii
ENSCSEG00000002532	prpf3	99	70.605	ENSOARG00000020798	PRPF3	100	72.011	Ovis_aries
ENSCSEG00000002532	prpf3	99	70.464	ENSPPAG00000030983	PRPF3	100	71.871	Pan_paniscus
ENSCSEG00000002532	prpf3	98	55.605	ENSPPAG00000043769	-	99	55.306	Pan_paniscus
ENSCSEG00000002532	prpf3	99	70.605	ENSPPRG00000000731	PRPF3	100	72.011	Panthera_pardus
ENSCSEG00000002532	prpf3	99	70.605	ENSPTIG00000005516	PRPF3	100	72.011	Panthera_tigris_altaica
ENSCSEG00000002532	prpf3	99	70.605	ENSPTRG00000001254	PRPF3	100	72.011	Pan_troglodytes
ENSCSEG00000002532	prpf3	98	54.709	ENSPTRG00000047819	-	99	54.410	Pan_troglodytes
ENSCSEG00000002532	prpf3	99	70.464	ENSPANG00000000499	PRPF3	100	71.871	Papio_anubis
ENSCSEG00000002532	prpf3	100	82.915	ENSPKIG00000010501	prpf3	100	82.915	Paramormyrops_kingsleyae
ENSCSEG00000002532	prpf3	99	71.972	ENSPSIG00000014877	PRPF3	100	72.394	Pelodiscus_sinensis
ENSCSEG00000002532	prpf3	100	81.918	ENSPMGG00000007776	prpf3	100	82.075	Periophthalmus_magnuspinnatus
ENSCSEG00000002532	prpf3	99	70.605	ENSPEMG00000011672	Prpf3	100	72.011	Peromyscus_maniculatus_bairdii
ENSCSEG00000002532	prpf3	67	70.481	ENSPMAG00000005588	prpf3	97	71.396	Petromyzon_marinus
ENSCSEG00000002532	prpf3	99	70.886	ENSPCIG00000008795	PRPF3	100	72.293	Phascolarctos_cinereus
ENSCSEG00000002532	prpf3	100	84.017	ENSPFOG00000013638	prpf3	100	84.017	Poecilia_formosa
ENSCSEG00000002532	prpf3	100	83.428	ENSPLAG00000018103	prpf3	100	83.428	Poecilia_latipinna
ENSCSEG00000002532	prpf3	100	83.428	ENSPMEG00000023546	prpf3	100	83.428	Poecilia_mexicana
ENSCSEG00000002532	prpf3	100	83.711	ENSPREG00000017216	prpf3	100	83.569	Poecilia_reticulata
ENSCSEG00000002532	prpf3	76	62.847	ENSPPYG00000018646	-	99	63.586	Pongo_abelii
ENSCSEG00000002532	prpf3	93	69.683	ENSPPYG00000000900	PRPF3	99	71.192	Pongo_abelii
ENSCSEG00000002532	prpf3	86	75.269	ENSPCAG00000014908	PRPF3	87	73.183	Procavia_capensis
ENSCSEG00000002532	prpf3	99	70.464	ENSPCOG00000013828	PRPF3	100	71.871	Propithecus_coquereli
ENSCSEG00000002532	prpf3	99	70.605	ENSPVAG00000013472	PRPF3	100	71.871	Pteropus_vampyrus
ENSCSEG00000002532	prpf3	100	89.130	ENSPNYG00000004279	prpf3	100	87.201	Pundamilia_nyererei
ENSCSEG00000002532	prpf3	100	81.776	ENSPNAG00000001799	prpf3	100	81.776	Pygocentrus_nattereri
ENSCSEG00000002532	prpf3	99	70.745	ENSRNOG00000025629	Prpf3	100	72.152	Rattus_norvegicus
ENSCSEG00000002532	prpf3	83	69.504	ENSRBIG00000028854	PRPF3	98	70.922	Rhinopithecus_bieti
ENSCSEG00000002532	prpf3	99	70.605	ENSRROG00000027464	PRPF3	100	72.011	Rhinopithecus_roxellana
ENSCSEG00000002532	prpf3	99	64.276	ENSSBOG00000033104	PRPF3	100	65.682	Saimiri_boliviensis_boliviensis
ENSCSEG00000002532	prpf3	99	70.506	ENSSHAG00000009548	PRPF3	100	71.910	Sarcophilus_harrisii
ENSCSEG00000002532	prpf3	100	82.453	ENSSFOG00015022014	prpf3	100	82.453	Scleropages_formosus
ENSCSEG00000002532	prpf3	100	86.620	ENSSMAG00000015739	prpf3	100	86.479	Scophthalmus_maximus
ENSCSEG00000002532	prpf3	100	82.153	ENSSDUG00000006840	prpf3	100	82.295	Seriola_dumerili
ENSCSEG00000002532	prpf3	100	88.467	ENSSLDG00000015423	prpf3	100	88.467	Seriola_lalandi_dorsalis
ENSCSEG00000002532	prpf3	99	70.605	ENSSARG00000011064	PRPF3	100	72.011	Sorex_araneus
ENSCSEG00000002532	prpf3	99	70.417	ENSSPUG00000000809	PRPF3	100	71.151	Sphenodon_punctatus
ENSCSEG00000002532	prpf3	100	88.644	ENSSPAG00000018721	prpf3	100	88.170	Stegastes_partitus
ENSCSEG00000002532	prpf3	99	70.605	ENSSSCG00000030119	PRPF3	100	75.000	Sus_scrofa
ENSCSEG00000002532	prpf3	99	62.817	ENSTGUG00000004552	PRPF3	100	62.958	Taeniopygia_guttata
ENSCSEG00000002532	prpf3	100	81.020	ENSTRUG00000014923	prpf3	100	80.595	Takifugu_rubripes
ENSCSEG00000002532	prpf3	99	82.238	ENSTNIG00000008058	prpf3	100	81.678	Tetraodon_nigroviridis
ENSCSEG00000002532	prpf3	79	71.882	ENSTBEG00000014072	PRPF3	88	73.696	Tupaia_belangeri
ENSCSEG00000002532	prpf3	99	65.401	ENSTTRG00000010616	PRPF3	100	66.807	Tursiops_truncatus
ENSCSEG00000002532	prpf3	86	74.910	ENSUAMG00000009345	PRPF3	100	75.000	Ursus_americanus
ENSCSEG00000002532	prpf3	99	70.605	ENSUMAG00000003720	PRPF3	100	72.011	Ursus_maritimus
ENSCSEG00000002532	prpf3	87	77.273	ENSVPAG00000005425	PRPF3	89	78.005	Vicugna_pacos
ENSCSEG00000002532	prpf3	99	73.684	ENSVVUG00000007933	PRPF3	100	74.613	Vulpes_vulpes
ENSCSEG00000002532	prpf3	97	73.921	ENSXETG00000018654	prpf3	100	70.407	Xenopus_tropicalis
ENSCSEG00000002532	prpf3	100	84.227	ENSXMAG00000016347	prpf3	100	84.409	Xiphophorus_maculatus