EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002546 (Gene tree)
Gene ID: 103385897
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 8892 bases
Position: chr11:3168369-3177260
Accession: 103385897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000003895	THUMP	PF02926.17	2.4e-10	1	1
ENSCSEP00000003895	UPF0020	PF01170.18	6.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000003944	-	3951	XM_008319919	ENSCSEP00000003895	483 (aa)	XP_008318141	UPI000495ECA5

Gene Model

Click here to download ENSCSEG00000002546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002546	thumpd3	90	58.150	ENSG00000134077	THUMPD3	90	58.150	Homo_sapiens
ENSCSEG00000002546	thumpd3	95	80.258	ENSAPOG00000015836	thumpd3	95	80.952	Acanthochromis_polyacanthus
ENSCSEG00000002546	thumpd3	93	58.613	ENSAMEG00000011321	THUMPD3	92	59.023	Ailuropoda_melanoleuca
ENSCSEG00000002546	thumpd3	99	76.613	ENSACIG00000020096	thumpd3	96	79.123	Amphilophus_citrinellus
ENSCSEG00000002546	thumpd3	96	80.388	ENSAOCG00000004399	thumpd3	94	79.618	Amphiprion_ocellaris
ENSCSEG00000002546	thumpd3	96	81.250	ENSAPEG00000016740	thumpd3	94	80.467	Amphiprion_percula
ENSCSEG00000002546	thumpd3	97	78.361	ENSATEG00000005345	thumpd3	96	78.361	Anabas_testudineus
ENSCSEG00000002546	thumpd3	78	62.755	ENSAPLG00000003598	THUMPD3	99	63.010	Anas_platyrhynchos
ENSCSEG00000002546	thumpd3	92	60.625	ENSACAG00000014974	THUMPD3	92	60.625	Anolis_carolinensis
ENSCSEG00000002546	thumpd3	90	58.952	ENSANAG00000002365	THUMPD3	90	58.952	Aotus_nancymaae
ENSCSEG00000002546	thumpd3	85	55.797	ENSACLG00000013504	-	87	55.797	Astatotilapia_calliptera
ENSCSEG00000002546	thumpd3	99	77.621	ENSACLG00000023333	thumpd3	93	81.075	Astatotilapia_calliptera
ENSCSEG00000002546	thumpd3	95	70.742	ENSAMXG00000015683	thumpd3	97	70.742	Astyanax_mexicanus
ENSCSEG00000002546	thumpd3	94	60.254	ENSBTAG00000003112	THUMPD3	93	60.510	Bos_taurus
ENSCSEG00000002546	thumpd3	87	34.588	WBGene00010846	M04B2.2	96	34.824	Caenorhabditis_elegans
ENSCSEG00000002546	thumpd3	90	58.370	ENSCJAG00000015949	THUMPD3	90	58.370	Callithrix_jacchus
ENSCSEG00000002546	thumpd3	95	58.700	ENSCAFG00000005499	THUMPD3	92	60.259	Canis_familiaris
ENSCSEG00000002546	thumpd3	75	58.747	ENSCAFG00000008060	-	93	59.269	Canis_familiaris
ENSCSEG00000002546	thumpd3	81	60.539	ENSCAFG00020025887	-	94	60.099	Canis_lupus_dingo
ENSCSEG00000002546	thumpd3	95	58.700	ENSCAFG00020008895	-	92	60.259	Canis_lupus_dingo
ENSCSEG00000002546	thumpd3	92	60.560	ENSCHIG00000024037	THUMPD3	91	60.823	Capra_hircus
ENSCSEG00000002546	thumpd3	90	58.079	ENSTSYG00000000159	THUMPD3	90	58.079	Carlito_syrichta
ENSCSEG00000002546	thumpd3	87	41.608	ENSCAPG00000017486	THUMPD3	84	42.217	Cavia_aperea
ENSCSEG00000002546	thumpd3	94	58.774	ENSCPOG00000033287	THUMPD3	93	58.774	Cavia_porcellus
ENSCSEG00000002546	thumpd3	90	58.150	ENSCCAG00000027067	-	90	58.150	Cebus_capucinus
ENSCSEG00000002546	thumpd3	93	52.452	ENSCCAG00000021429	-	92	53.125	Cebus_capucinus
ENSCSEG00000002546	thumpd3	90	56.608	ENSCATG00000040999	THUMPD3	90	57.019	Cercocebus_atys
ENSCSEG00000002546	thumpd3	92	59.307	ENSCLAG00000000690	THUMPD3	91	59.307	Chinchilla_lanigera
ENSCSEG00000002546	thumpd3	90	57.205	ENSCSAG00000010753	THUMPD3	90	57.802	Chlorocebus_sabaeus
ENSCSEG00000002546	thumpd3	79	48.837	ENSCHOG00000012851	THUMPD3	76	48.837	Choloepus_hoffmanni
ENSCSEG00000002546	thumpd3	93	60.587	ENSCPBG00000014771	THUMPD3	93	61.263	Chrysemys_picta_bellii
ENSCSEG00000002546	thumpd3	90	40.183	ENSCSAVG00000008668	-	97	40.183	Ciona_savignyi
ENSCSEG00000002546	thumpd3	90	56.987	ENSCANG00000031901	THUMPD3	90	57.582	Colobus_angolensis_palliatus
ENSCSEG00000002546	thumpd3	92	59.607	ENSCGRG00001024117	Thumpd3	91	59.389	Cricetulus_griseus_chok1gshd
ENSCSEG00000002546	thumpd3	92	59.607	ENSCGRG00000018116	Thumpd3	91	59.389	Cricetulus_griseus_crigri
ENSCSEG00000002546	thumpd3	96	77.802	ENSCVAG00000001019	thumpd3	94	76.471	Cyprinodon_variegatus
ENSCSEG00000002546	thumpd3	95	65.812	ENSDARG00000059634	thumpd3	98	66.239	Danio_rerio
ENSCSEG00000002546	thumpd3	92	59.653	ENSDNOG00000047668	THUMPD3	89	59.653	Dasypus_novemcinctus
ENSCSEG00000002546	thumpd3	92	58.009	ENSDORG00000003257	Thumpd3	92	59.091	Dipodomys_ordii
ENSCSEG00000002546	thumpd3	60	56.026	ENSETEG00000020239	-	60	56.026	Echinops_telfairi
ENSCSEG00000002546	thumpd3	90	51.106	ENSEBUG00000004221	thumpd3	99	51.106	Eptatretus_burgeri
ENSCSEG00000002546	thumpd3	95	56.994	ENSEASG00005013327	THUMPD3	92	58.495	Equus_asinus_asinus
ENSCSEG00000002546	thumpd3	95	58.664	ENSECAG00000002016	THUMPD3	92	60.215	Equus_caballus
ENSCSEG00000002546	thumpd3	95	53.027	ENSEEUG00000014696	THUMPD3	92	53.863	Erinaceus_europaeus
ENSCSEG00000002546	thumpd3	81	83.813	ENSELUG00000018246	thumpd3	70	83.813	Esox_lucius
ENSCSEG00000002546	thumpd3	92	59.307	ENSFCAG00000006171	THUMPD3	91	59.436	Felis_catus
ENSCSEG00000002546	thumpd3	84	57.077	ENSFALG00000013631	THUMPD3	90	57.143	Ficedula_albicollis
ENSCSEG00000002546	thumpd3	94	57.411	ENSFDAG00000014825	THUMPD3	93	57.692	Fukomys_damarensis
ENSCSEG00000002546	thumpd3	99	77.618	ENSFHEG00000006006	thumpd3	94	79.443	Fundulus_heteroclitus
ENSCSEG00000002546	thumpd3	93	70.444	ENSGMOG00000007923	thumpd3	92	70.861	Gadus_morhua
ENSCSEG00000002546	thumpd3	55	30.147	ENSGALG00000009119	THUMPD2	60	30.147	Gallus_gallus
ENSCSEG00000002546	thumpd3	94	57.732	ENSGALG00000044813	THUMPD3	93	59.827	Gallus_gallus
ENSCSEG00000002546	thumpd3	99	75.453	ENSGAFG00000021645	thumpd3	94	78.252	Gambusia_affinis
ENSCSEG00000002546	thumpd3	96	76.445	ENSGACG00000000930	thumpd3	99	76.445	Gasterosteus_aculeatus
ENSCSEG00000002546	thumpd3	93	60.797	ENSGAGG00000022750	THUMPD3	93	61.895	Gopherus_agassizii
ENSCSEG00000002546	thumpd3	90	58.079	ENSGGOG00000000604	THUMPD3	90	58.079	Gorilla_gorilla
ENSCSEG00000002546	thumpd3	99	77.621	ENSHBUG00000013405	thumpd3	93	81.075	Haplochromis_burtoni
ENSCSEG00000002546	thumpd3	94	56.930	ENSHGLG00000016200	THUMPD3	93	57.692	Heterocephalus_glaber_female
ENSCSEG00000002546	thumpd3	90	53.007	ENSHGLG00100000505	-	92	53.007	Heterocephalus_glaber_male
ENSCSEG00000002546	thumpd3	94	57.021	ENSHGLG00100017321	-	93	57.234	Heterocephalus_glaber_male
ENSCSEG00000002546	thumpd3	95	77.007	ENSHCOG00000004871	thumpd3	96	77.440	Hippocampus_comes
ENSCSEG00000002546	thumpd3	93	70.601	ENSIPUG00000019415	THUMPD3	93	70.601	Ictalurus_punctatus
ENSCSEG00000002546	thumpd3	90	60.793	ENSSTOG00000003973	THUMPD3	90	60.793	Ictidomys_tridecemlineatus
ENSCSEG00000002546	thumpd3	92	54.705	ENSJJAG00000017751	Thumpd3	89	54.705	Jaculus_jaculus
ENSCSEG00000002546	thumpd3	99	76.008	ENSKMAG00000021025	thumpd3	88	78.465	Kryptolebias_marmoratus
ENSCSEG00000002546	thumpd3	99	77.688	ENSLBEG00000012252	thumpd3	93	80.430	Labrus_bergylta
ENSCSEG00000002546	thumpd3	95	57.938	ENSLACG00000018604	THUMPD3	94	59.205	Latimeria_chalumnae
ENSCSEG00000002546	thumpd3	96	62.451	ENSLOCG00000009800	thumpd3	94	65.875	Lepisosteus_oculatus
ENSCSEG00000002546	thumpd3	94	61.146	ENSLAFG00000005103	THUMPD3	93	61.146	Loxodonta_africana
ENSCSEG00000002546	thumpd3	90	57.205	ENSMFAG00000044884	THUMPD3	90	57.802	Macaca_fascicularis
ENSCSEG00000002546	thumpd3	90	57.205	ENSMMUG00000017307	THUMPD3	90	57.802	Macaca_mulatta
ENSCSEG00000002546	thumpd3	90	57.205	ENSMNEG00000030529	THUMPD3	90	57.802	Macaca_nemestrina
ENSCSEG00000002546	thumpd3	90	56.828	ENSMLEG00000032943	THUMPD3	90	58.370	Mandrillus_leucophaeus
ENSCSEG00000002546	thumpd3	96	77.088	ENSMAMG00000023934	thumpd3	95	77.088	Mastacembelus_armatus
ENSCSEG00000002546	thumpd3	99	77.621	ENSMZEG00005010623	thumpd3	93	81.075	Maylandia_zebra
ENSCSEG00000002546	thumpd3	80	60.199	ENSMGAG00000010182	THUMPD3	100	60.697	Meleagris_gallopavo
ENSCSEG00000002546	thumpd3	91	59.695	ENSMAUG00000012250	Thumpd3	90	59.477	Mesocricetus_auratus
ENSCSEG00000002546	thumpd3	90	56.034	ENSMICG00000010095	THUMPD3	89	56.034	Microcebus_murinus
ENSCSEG00000002546	thumpd3	94	58.562	ENSMOCG00000020148	Thumpd3	93	58.351	Microtus_ochrogaster
ENSCSEG00000002546	thumpd3	99	76.386	ENSMMOG00000021791	thumpd3	97	78.541	Mola_mola
ENSCSEG00000002546	thumpd3	95	56.729	ENSMODG00000004715	-	95	56.729	Monodelphis_domestica
ENSCSEG00000002546	thumpd3	95	77.542	ENSMALG00000017316	thumpd3	94	80.405	Monopterus_albus
ENSCSEG00000002546	thumpd3	59	49.667	MGP_CAROLIEiJ_G0028714	-	59	52.817	Mus_caroli
ENSCSEG00000002546	thumpd3	94	57.474	ENSMUSG00000030264	Thumpd3	93	58.105	Mus_musculus
ENSCSEG00000002546	thumpd3	94	58.263	MGP_PahariEiJ_G0022465	Thumpd3	94	58.368	Mus_pahari
ENSCSEG00000002546	thumpd3	94	57.474	MGP_SPRETEiJ_G0029742	Thumpd3	93	58.105	Mus_spretus
ENSCSEG00000002546	thumpd3	92	59.023	ENSMPUG00000017066	-	91	59.275	Mustela_putorius_furo
ENSCSEG00000002546	thumpd3	92	52.723	ENSMPUG00000005219	-	91	54.048	Mustela_putorius_furo
ENSCSEG00000002546	thumpd3	94	57.563	ENSMLUG00000008538	THUMPD3	93	57.563	Myotis_lucifugus
ENSCSEG00000002546	thumpd3	91	59.913	ENSNGAG00000021014	-	91	59.913	Nannospalax_galili
ENSCSEG00000002546	thumpd3	92	50.112	ENSNGAG00000001549	-	90	50.000	Nannospalax_galili
ENSCSEG00000002546	thumpd3	99	77.016	ENSNBRG00000004886	thumpd3	96	78.706	Neolamprologus_brichardi
ENSCSEG00000002546	thumpd3	90	58.150	ENSNLEG00000003863	THUMPD3	90	58.150	Nomascus_leucogenys
ENSCSEG00000002546	thumpd3	80	59.305	ENSMEUG00000009819	THUMPD3	98	58.495	Notamacropus_eugenii
ENSCSEG00000002546	thumpd3	82	58.394	ENSOPRG00000002020	THUMPD3	98	60.097	Ochotona_princeps
ENSCSEG00000002546	thumpd3	70	56.742	ENSODEG00000018242	THUMPD3	100	56.742	Octodon_degus
ENSCSEG00000002546	thumpd3	99	77.218	ENSONIG00000018977	thumpd3	93	80.645	Oreochromis_niloticus
ENSCSEG00000002546	thumpd3	81	56.971	ENSOANG00000014481	THUMPD3	97	57.933	Ornithorhynchus_anatinus
ENSCSEG00000002546	thumpd3	90	60.793	ENSOCUG00000010921	THUMPD3	92	59.743	Oryctolagus_cuniculus
ENSCSEG00000002546	thumpd3	99	75.514	ENSORLG00000000676	thumpd3	94	78.478	Oryzias_latipes
ENSCSEG00000002546	thumpd3	99	75.720	ENSORLG00020007509	thumpd3	94	78.696	Oryzias_latipes_hni
ENSCSEG00000002546	thumpd3	99	75.926	ENSORLG00015003615	thumpd3	94	78.913	Oryzias_latipes_hsok
ENSCSEG00000002546	thumpd3	99	75.833	ENSOMEG00000014115	thumpd3	94	78.525	Oryzias_melastigma
ENSCSEG00000002546	thumpd3	81	57.635	ENSOGAG00000017111	THUMPD3	99	57.635	Otolemur_garnettii
ENSCSEG00000002546	thumpd3	92	60.560	ENSOARG00000007139	THUMPD3	89	60.823	Ovis_aries
ENSCSEG00000002546	thumpd3	90	58.150	ENSPPAG00000025852	THUMPD3	90	58.150	Pan_paniscus
ENSCSEG00000002546	thumpd3	95	58.144	ENSPPRG00000008071	THUMPD3	93	58.385	Panthera_pardus
ENSCSEG00000002546	thumpd3	95	58.316	ENSPTIG00000017923	THUMPD3	94	58.562	Panthera_tigris_altaica
ENSCSEG00000002546	thumpd3	90	57.930	ENSPTRG00000014585	THUMPD3	90	57.930	Pan_troglodytes
ENSCSEG00000002546	thumpd3	90	56.798	ENSPANG00000016253	THUMPD3	90	57.675	Papio_anubis
ENSCSEG00000002546	thumpd3	94	66.234	ENSPKIG00000014009	thumpd3	94	66.234	Paramormyrops_kingsleyae
ENSCSEG00000002546	thumpd3	90	61.207	ENSPSIG00000007370	THUMPD3	91	61.207	Pelodiscus_sinensis
ENSCSEG00000002546	thumpd3	96	74.026	ENSPMGG00000017563	thumpd3	93	76.180	Periophthalmus_magnuspinnatus
ENSCSEG00000002546	thumpd3	92	60.304	ENSPEMG00000022411	Thumpd3	91	60.738	Peromyscus_maniculatus_bairdii
ENSCSEG00000002546	thumpd3	90	52.442	ENSPMAG00000001291	thumpd3	98	52.667	Petromyzon_marinus
ENSCSEG00000002546	thumpd3	90	59.041	ENSPCIG00000002049	THUMPD3	90	58.388	Phascolarctos_cinereus
ENSCSEG00000002546	thumpd3	99	74.648	ENSPFOG00000002318	thumpd3	93	78.017	Poecilia_formosa
ENSCSEG00000002546	thumpd3	99	74.648	ENSPLAG00000014804	thumpd3	93	78.017	Poecilia_latipinna
ENSCSEG00000002546	thumpd3	99	74.648	ENSPMEG00000000582	thumpd3	93	78.017	Poecilia_mexicana
ENSCSEG00000002546	thumpd3	99	74.950	ENSPREG00000009176	thumpd3	94	77.660	Poecilia_reticulata
ENSCSEG00000002546	thumpd3	89	43.880	ENSPPYG00000017616	-	89	43.880	Pongo_abelii
ENSCSEG00000002546	thumpd3	90	57.930	ENSPPYG00000029461	THUMPD3	90	57.930	Pongo_abelii
ENSCSEG00000002546	thumpd3	83	59.330	ENSPCAG00000015398	THUMPD3	99	59.330	Procavia_capensis
ENSCSEG00000002546	thumpd3	90	49.890	ENSPCOG00000018095	-	90	51.092	Propithecus_coquereli
ENSCSEG00000002546	thumpd3	80	53.102	ENSPCOG00000023618	-	92	53.102	Propithecus_coquereli
ENSCSEG00000002546	thumpd3	92	58.531	ENSPVAG00000008721	THUMPD3	91	58.785	Pteropus_vampyrus
ENSCSEG00000002546	thumpd3	99	77.621	ENSPNYG00000006918	thumpd3	93	81.075	Pundamilia_nyererei
ENSCSEG00000002546	thumpd3	93	70.953	ENSPNAG00000014936	thumpd3	94	70.953	Pygocentrus_nattereri
ENSCSEG00000002546	thumpd3	92	59.219	ENSRNOG00000006941	Thumpd3	91	59.436	Rattus_norvegicus
ENSCSEG00000002546	thumpd3	92	56.897	ENSRBIG00000035954	THUMPD3	92	57.484	Rhinopithecus_bieti
ENSCSEG00000002546	thumpd3	92	56.681	ENSRROG00000035734	THUMPD3	92	57.267	Rhinopithecus_roxellana
ENSCSEG00000002546	thumpd3	92	58.079	ENSSBOG00000023567	THUMPD3	92	58.744	Saimiri_boliviensis_boliviensis
ENSCSEG00000002546	thumpd3	93	57.895	ENSSHAG00000014467	THUMPD3	91	58.874	Sarcophilus_harrisii
ENSCSEG00000002546	thumpd3	93	69.651	ENSSFOG00015019210	thumpd3	92	69.737	Scleropages_formosus
ENSCSEG00000002546	thumpd3	96	82.151	ENSSMAG00000000609	thumpd3	97	82.151	Scophthalmus_maximus
ENSCSEG00000002546	thumpd3	99	79.022	ENSSDUG00000012179	thumpd3	97	80.810	Seriola_dumerili
ENSCSEG00000002546	thumpd3	99	80.041	ENSSLDG00000022028	thumpd3	95	81.237	Seriola_lalandi_dorsalis
ENSCSEG00000002546	thumpd3	79	66.234	ENSSARG00000002239	THUMPD3	78	66.234	Sorex_araneus
ENSCSEG00000002546	thumpd3	92	57.741	ENSSPUG00000017461	THUMPD3	94	58.910	Sphenodon_punctatus
ENSCSEG00000002546	thumpd3	99	78.882	ENSSPAG00000008345	thumpd3	92	80.556	Stegastes_partitus
ENSCSEG00000002546	thumpd3	92	60.259	ENSSSCG00000011542	THUMPD3	92	60.521	Sus_scrofa
ENSCSEG00000002546	thumpd3	89	59.508	ENSTGUG00000010440	THUMPD3	100	59.508	Taeniopygia_guttata
ENSCSEG00000002546	thumpd3	99	68.399	ENSTRUG00000004420	thumpd3	96	70.065	Takifugu_rubripes
ENSCSEG00000002546	thumpd3	94	77.802	ENSTNIG00000014627	thumpd3	98	77.802	Tetraodon_nigroviridis
ENSCSEG00000002546	thumpd3	93	53.846	ENSTBEG00000003450	THUMPD3	91	53.846	Tupaia_belangeri
ENSCSEG00000002546	thumpd3	92	59.783	ENSTTRG00000009694	THUMPD3	91	59.783	Tursiops_truncatus
ENSCSEG00000002546	thumpd3	92	57.974	ENSUAMG00000009412	THUMPD3	92	59.524	Ursus_americanus
ENSCSEG00000002546	thumpd3	92	59.955	ENSUMAG00000019241	THUMPD3	91	60.899	Ursus_maritimus
ENSCSEG00000002546	thumpd3	77	55.670	ENSVPAG00000002855	THUMPD3	93	55.670	Vicugna_pacos
ENSCSEG00000002546	thumpd3	95	58.700	ENSVVUG00000025278	THUMPD3	92	60.259	Vulpes_vulpes
ENSCSEG00000002546	thumpd3	94	59.454	ENSXETG00000001447	thumpd3	93	59.454	Xenopus_tropicalis
ENSCSEG00000002546	thumpd3	96	77.634	ENSXCOG00000000159	thumpd3	97	77.634	Xiphophorus_couchianus
ENSCSEG00000002546	thumpd3	96	77.419	ENSXMAG00000001423	thumpd3	93	77.419	Xiphophorus_maculatus