EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002596 (Gene tree)
Gene ID: 103390569
Gene Symbol: -
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 9469 bases
Position: chr15:1339748-1349216
Accession: 103390569
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004022	RRM_1	PF00076.22	9.4e-25	1	1
ENSCSEP00000004020	RRM_1	PF00076.22	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004071	-	1251	-	ENSCSEP00000004022	416 (aa)	-	-
ENSCSET00000004069	-	1371	XM_017039140	ENSCSEP00000004020	456 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000002596's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002596	-	66	54.518	ENSANAG00000027508	-	65	63.241	Aotus_nancymaae
ENSCSEG00000002596	-	67	53.916	ENSCJAG00000011554	-	71	63.241	Callithrix_jacchus
ENSCSEG00000002596	-	68	53.916	ENSCJAG00000039083	-	69	61.446	Callithrix_jacchus
ENSCSEG00000002596	-	82	85.000	ENSCAFG00000015567	CSTF2T	65	68.954	Canis_familiaris
ENSCSEG00000002596	-	81	85.000	ENSTSYG00000007750	CSTF2T	51	73.604	Carlito_syrichta
ENSCSEG00000002596	-	52	90.355	ENSCPOG00000004195	CSTF2T	54	90.355	Cavia_porcellus
ENSCSEG00000002596	-	66	54.192	ENSCCAG00000020816	-	64	62.745	Cebus_capucinus
ENSCSEG00000002596	-	66	54.762	ENSCATG00000041868	-	70	63.137	Cercocebus_atys
ENSCSEG00000002596	-	89	85.000	ENSCLAG00000017916	CSTF2T	52	90.355	Chinchilla_lanigera
ENSCSEG00000002596	-	68	57.705	ENSCANG00000005843	-	69	62.646	Colobus_angolensis_palliatus
ENSCSEG00000002596	-	96	49.890	ENSEBUG00000014295	CSTF2T	98	50.222	Eptatretus_burgeri
ENSCSEG00000002596	-	75	79.394	ENSELUG00000004079	-	81	79.056	Esox_lucius
ENSCSEG00000002596	-	81	89.474	ENSGGOG00000042388	-	72	62.257	Gorilla_gorilla
ENSCSEG00000002596	-	81	89.474	ENSGGOG00000036416	-	72	62.257	Gorilla_gorilla
ENSCSEG00000002596	-	53	88.119	ENSHGLG00000015478	CSTF2T	57	89.474	Heterocephalus_glaber_female
ENSCSEG00000002596	-	53	88.119	ENSHGLG00100000336	CSTF2T	57	89.474	Heterocephalus_glaber_male
ENSCSEG00000002596	-	53	88.614	ENSJJAG00000019881	Cstf2t	63	64.972	Jaculus_jaculus
ENSCSEG00000002596	-	95	51.184	ENSLAFG00000002058	CSTF2T	99	49.291	Loxodonta_africana
ENSCSEG00000002596	-	68	58.361	ENSMFAG00000042009	-	73	63.137	Macaca_fascicularis
ENSCSEG00000002596	-	66	54.303	ENSMMUG00000042906	-	72	62.745	Macaca_mulatta
ENSCSEG00000002596	-	68	58.361	ENSMNEG00000031410	-	73	63.137	Macaca_nemestrina
ENSCSEG00000002596	-	81	85.000	ENSMICG00000000867	-	59	62.257	Microcebus_murinus
ENSCSEG00000002596	-	96	82.500	ENSMICG00000030551	-	59	80.591	Microcebus_murinus
ENSCSEG00000002596	-	95	72.400	ENSMALG00000008842	-	97	73.747	Monopterus_albus
ENSCSEG00000002596	-	53	88.614	MGP_CAROLIEiJ_G0022872	Cstf2t	64	89.474	Mus_caroli
ENSCSEG00000002596	-	53	88.614	MGP_SPRETEiJ_G0023790	Cstf2t	63	89.474	Mus_spretus
ENSCSEG00000002596	-	80	87.500	ENSMLUG00000011187	-	61	87.500	Myotis_lucifugus
ENSCSEG00000002596	-	73	66.667	ENSOCUG00000004647	-	75	78.008	Oryctolagus_cuniculus
ENSCSEG00000002596	-	67	57.525	ENSPPAG00000032242	-	72	62.745	Pan_paniscus
ENSCSEG00000002596	-	67	57.525	ENSPTRG00000043097	-	72	62.745	Pan_troglodytes
ENSCSEG00000002596	-	68	58.361	ENSPANG00000029734	-	73	63.137	Papio_anubis
ENSCSEG00000002596	-	95	97.500	ENSPFOG00000016756	CSTF2T	94	88.851	Poecilia_formosa
ENSCSEG00000002596	-	81	85.000	ENSRBIG00000029324	CSTF2T	72	62.646	Rhinopithecus_bieti
ENSCSEG00000002596	-	81	85.000	ENSRROG00000042507	CSTF2T	72	62.646	Rhinopithecus_roxellana
ENSCSEG00000002596	-	81	89.474	ENSSBOG00000022638	CSTF2T	68	62.257	Saimiri_boliviensis_boliviensis
ENSCSEG00000002596	-	100	73.129	ENSSDUG00000001049	-	96	73.547	Seriola_dumerili
ENSCSEG00000002596	-	100	72.937	ENSSLDG00000010056	-	96	73.347	Seriola_lalandi_dorsalis
ENSCSEG00000002596	-	95	64.215	ENSSPAG00000009247	-	96	68.612	Stegastes_partitus
ENSCSEG00000002596	-	99	68.689	ENSTRUG00000004323	-	96	67.886	Takifugu_rubripes
ENSCSEG00000002596	-	81	85.000	ENSTBEG00000014379	CSTF2T	60	85.000	Tupaia_belangeri