EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000002635 (Gene tree)
Gene ID
103387258
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
12631 bases
Position
chr1:25610613-25623243
Accession
103387258
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000004096RNA_pol_Rpb1_5PF04998.173.5e-10111
ENSCSEP00000004081RNA_pol_Rpb1_5PF04998.173.7e-10111
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-29131
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-29231
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-29331
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-29431
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-29531
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-29631
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-29731
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-29831
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-29931
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-291031
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-291131
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-291231
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-291331
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-291431
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-291531
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-291631
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-291731
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-291831
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-291931
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-292031
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-292131
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-292231
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-292331
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-292431
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-292531
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-292631
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-292731
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-292831
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-292931
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-293031
ENSCSEP00000004096RNA_pol_Rpb1_RPF05001.133.7e-293131
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-23132
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-23232
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-23332
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-23432
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-23532
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-23632
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-23732
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-23832
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-23932
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-231032
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-231132
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-231232
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-231332
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-231432
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-231532
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-231632
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-231732
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-231832
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-231932
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-232032
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-232132
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-232232
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-232332
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-232432
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-232532
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-232632
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-232732
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-232832
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-232932
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-233032
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-233132
ENSCSEP00000004081RNA_pol_Rpb1_RPF05001.131e-233232
ENSCSEP00000004096RNA_pol_Rpb1_4PF05000.173.8e-3711
ENSCSEP00000004081RNA_pol_Rpb1_4PF05000.174e-3711
ENSCSEP00000004096RNA_pol_Rpb1_2PF00623.206.6e-7511
ENSCSEP00000004081RNA_pol_Rpb1_2PF00623.206.8e-7511
ENSCSEP00000004096RNA_pol_Rpb1_3PF04983.183.7e-5011
ENSCSEP00000004081RNA_pol_Rpb1_3PF04983.183.9e-5011
ENSCSEP00000004096RNA_pol_Rpb1_1PF04997.121.6e-10811
ENSCSEP00000004081RNA_pol_Rpb1_1PF04997.121.7e-10811
ENSCSEP00000004096RNA_pol_Rpb1_7PF04990.122.3e-5411
ENSCSEP00000004081RNA_pol_Rpb1_7PF04990.122.4e-5411
ENSCSEP00000004096RNA_pol_Rpb1_6PF04992.145.2e-6711
ENSCSEP00000004081RNA_pol_Rpb1_6PF04992.145.4e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000004149-5784-ENSCSEP000000040961927 (aa)--
ENSCSET00000004133-8543XM_008321810ENSCSEP000000040811965 (aa)XP_008320032UPI0004978EB0
Gene Model
Click here to download ENSCSEG00000002635's gene model file
Pathways
Pathway IDPathway NameSource
csem03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002635's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000002635polr2a5731.429ENSCSEG00000020190polr1a6931.429
ENSCSEG00000002635polr2a6838.865ENSCSEG00000016653polr3a9138.827
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000002635polr2a8797.519ENSAPOG00000006552polr2a9097.519Acanthochromis_polyacanthus
ENSCSEG00000002635polr2a8293.432ENSAMEG00000016265-8293.441Ailuropoda_melanoleuca
ENSCSEG00000002635polr2a10097.613ENSACIG00000015982polr2a9997.613Amphilophus_citrinellus
ENSCSEG00000002635polr2a9597.649ENSAOCG00000004255polr2a9397.649Amphiprion_ocellaris
ENSCSEG00000002635polr2a10098.080ENSAPEG00000012623polr2a9998.080Amphiprion_percula
ENSCSEG00000002635polr2a10098.028ENSATEG00000019644polr2a9998.028Anabas_testudineus
ENSCSEG00000002635polr2a8293.851ENSACAG00000014561POLR2A8293.859Anolis_carolinensis
ENSCSEG00000002635polr2a8293.961ENSANAG00000020093-8293.968Aotus_nancymaae
ENSCSEG00000002635polr2a10097.457ENSACLG00000006735polr2a9997.457Astatotilapia_calliptera
ENSCSEG00000002635polr2a10097.042ENSAMXG00000020046polr2a9997.042Astyanax_mexicanus
ENSCSEG00000002635polr2a8293.793ENSBTAG00000046765POLR2A8293.800Bos_taurus
ENSCSEG00000002635polr2a9971.429WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSCSEG00000002635polr2a8693.731ENSCAFG00000016532POLR2A9993.738Canis_familiaris
ENSCSEG00000002635polr2a8293.198ENSCAFG00020007929-8292.875Canis_lupus_dingo
ENSCSEG00000002635polr2a8293.793ENSCHIG00000027173-8293.800Capra_hircus
ENSCSEG00000002635polr2a9291.474ENSTSYG00000012803-8591.089Carlito_syrichta
ENSCSEG00000002635polr2a9990.439ENSCAPG00000001882-10092.920Cavia_aperea
ENSCSEG00000002635polr2a10088.332ENSCPOG00000014812-10092.684Cavia_porcellus
ENSCSEG00000002635polr2a8293.961ENSCCAG00000020938-8293.968Cebus_capucinus
ENSCSEG00000002635polr2a8293.793ENSCATG00000013680-8293.800Cercocebus_atys
ENSCSEG00000002635polr2a8293.897ENSCLAG00000012196-8293.905Chinchilla_lanigera
ENSCSEG00000002635polr2a8285.256ENSCSAG00000011644-8285.274Chlorocebus_sabaeus
ENSCSEG00000002635polr2a9183.282ENSCPBG00000012697POLR2A9985.188Chrysemys_picta_bellii
ENSCSEG00000002635polr2a9876.549ENSCING00000007884-9977.104Ciona_intestinalis
ENSCSEG00000002635polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSCSEG00000002635polr2a8293.110ENSCANG00000010622-8293.118Colobus_angolensis_palliatus
ENSCSEG00000002635polr2a8288.684ENSCGRG00001003538Polr2a8188.698Cricetulus_griseus_chok1gshd
ENSCSEG00000002635polr2a8290.268ENSCGRG00000012105Polr2a9390.074Cricetulus_griseus_crigri
ENSCSEG00000002635polr2a10097.557ENSCVAG00000005156polr2a9997.557Cyprinodon_variegatus
ENSCSEG00000002635polr2a10096.694ENSDARG00000099966polr2a9996.694Danio_rerio
ENSCSEG00000002635polr2a8290.875ENSDNOG00000016482-8290.253Dasypus_novemcinctus
ENSCSEG00000002635polr2a8293.961ENSDORG00000008667Polr2a8293.968Dipodomys_ordii
ENSCSEG00000002635polr2a9969.937FBgn0003277RpII2159974.222Drosophila_melanogaster
ENSCSEG00000002635polr2a9489.268ENSETEG00000002540-8790.325Echinops_telfairi
ENSCSEG00000002635polr2a8287.149ENSEBUG00000013967polr2a8287.135Eptatretus_burgeri
ENSCSEG00000002635polr2a8291.863ENSEASG00005019114-8391.816Equus_asinus_asinus
ENSCSEG00000002635polr2a8293.793ENSECAG00000018485POLR2A8293.800Equus_caballus
ENSCSEG00000002635polr2a8593.591ENSEEUG00000001154-9593.591Erinaceus_europaeus
ENSCSEG00000002635polr2a8894.763ENSELUG00000014284polr2a8494.763Esox_lucius
ENSCSEG00000002635polr2a8293.855ENSFDAG00000008287-8293.862Fukomys_damarensis
ENSCSEG00000002635polr2a9997.338ENSFHEG00000001768polr2a10097.338Fundulus_heteroclitus
ENSCSEG00000002635polr2a9992.470ENSGMOG00000007725polr2a10092.494Gadus_morhua
ENSCSEG00000002635polr2a99100.000ENSGAFG00000005389polr2a9993.983Gambusia_affinis
ENSCSEG00000002635polr2a9993.712ENSGACG00000019366polr2a10093.488Gasterosteus_aculeatus
ENSCSEG00000002635polr2a8291.703ENSGGOG00000014800-9692.284Gorilla_gorilla
ENSCSEG00000002635polr2a9997.377ENSHBUG00000018937polr2a10097.377Haplochromis_burtoni
ENSCSEG00000002635polr2a8294.024ENSHGLG00000012381POLR2A8294.032Heterocephalus_glaber_female
ENSCSEG00000002635polr2a8294.024ENSHGLG00100014843POLR2A8294.032Heterocephalus_glaber_male
ENSCSEG00000002635polr2a10096.896ENSHCOG00000011874polr2a9996.896Hippocampus_comes
ENSCSEG00000002635polr2a10096.886ENSIPUG00000002613Polr2a9996.886Ictalurus_punctatus
ENSCSEG00000002635polr2a8293.961ENSSTOG00000001304-8293.968Ictidomys_tridecemlineatus
ENSCSEG00000002635polr2a8293.833ENSJJAG00000013049Polr2a8293.841Jaculus_jaculus
ENSCSEG00000002635polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSCSEG00000002635polr2a10097.769ENSLBEG00000027652polr2a10097.769Labrus_bergylta
ENSCSEG00000002635polr2a8085.199ENSLACG00000012071POLR2A8185.209Latimeria_chalumnae
ENSCSEG00000002635polr2a9095.841ENSLOCG00000013863polr2a9795.407Lepisosteus_oculatus
ENSCSEG00000002635polr2a10090.633ENSLAFG00000008626-9793.800Loxodonta_africana
ENSCSEG00000002635polr2a5192.543ENSMFAG00000007042-9992.543Macaca_fascicularis
ENSCSEG00000002635polr2a8293.961ENSMMUG00000023620-9193.800Macaca_mulatta
ENSCSEG00000002635polr2a8293.516ENSMNEG00000040407-8293.366Macaca_nemestrina
ENSCSEG00000002635polr2a8089.429ENSMLEG00000030263-9992.543Mandrillus_leucophaeus
ENSCSEG00000002635polr2a10097.761ENSMAMG00000003351polr2a9997.761Mastacembelus_armatus
ENSCSEG00000002635polr2a10097.455ENSMZEG00005021429polr2a9997.455Maylandia_zebra
ENSCSEG00000002635polr2a5193.578ENSMAUG00000021055-9993.578Mesocricetus_auratus
ENSCSEG00000002635polr2a8293.731ENSMICG00000013372-9892.938Microcebus_murinus
ENSCSEG00000002635polr2a9991.561ENSMOCG00000018279Polr2a10091.572Microtus_ochrogaster
ENSCSEG00000002635polr2a9096.960ENSMMOG00000012515polr2a9296.960Mola_mola
ENSCSEG00000002635polr2a8293.669ENSMODG00000007009-8293.676Monodelphis_domestica
ENSCSEG00000002635polr2a9494.362ENSMALG00000008716polr2a9497.332Monopterus_albus
ENSCSEG00000002635polr2a8293.961MGP_CAROLIEiJ_G0016587Polr2a8293.968Mus_caroli
ENSCSEG00000002635polr2a8293.961ENSMUSG00000005198Polr2a8293.968Mus_musculus
ENSCSEG00000002635polr2a8291.718MGP_PahariEiJ_G0017718Polr2a8291.728Mus_pahari
ENSCSEG00000002635polr2a8293.961MGP_SPRETEiJ_G0017423Polr2a8293.968Mus_spretus
ENSCSEG00000002635polr2a8293.793ENSMPUG00000009648-8293.800Mustela_putorius_furo
ENSCSEG00000002635polr2a8293.304ENSMLUG00000009088-8293.313Myotis_lucifugus
ENSCSEG00000002635polr2a8293.961ENSNGAG00000002543Polr2a8293.968Nannospalax_galili
ENSCSEG00000002635polr2a10097.561ENSNBRG00000002005polr2a9997.561Neolamprologus_brichardi
ENSCSEG00000002635polr2a8293.961ENSNLEG00000009460-8293.968Nomascus_leucogenys
ENSCSEG00000002635polr2a9495.207ENSMEUG00000008611-9686.450Notamacropus_eugenii
ENSCSEG00000002635polr2a8093.493ENSOPRG00000015116-9993.493Ochotona_princeps
ENSCSEG00000002635polr2a8793.721ENSODEG00000017674-8589.396Octodon_degus
ENSCSEG00000002635polr2a10097.710ENSONIG00000009231polr2a9997.710Oreochromis_niloticus
ENSCSEG00000002635polr2a9989.770ENSOCUG00000017929-10093.676Oryctolagus_cuniculus
ENSCSEG00000002635polr2a10097.405ENSORLG00000006431polr2a9997.405Oryzias_latipes
ENSCSEG00000002635polr2a10097.405ENSORLG00020010235polr2a9997.405Oryzias_latipes_hni
ENSCSEG00000002635polr2a10097.405ENSORLG00015007075polr2a9997.405Oryzias_latipes_hsok
ENSCSEG00000002635polr2a9994.524ENSOMEG00000010713polr2a10096.826Oryzias_melastigma
ENSCSEG00000002635polr2a8293.793ENSOGAG00000033608-8293.800Otolemur_garnettii
ENSCSEG00000002635polr2a9193.793ENSOARG00000013874-9091.073Ovis_aries
ENSCSEG00000002635polr2a8193.858ENSPPAG00000043734-9091.355Pan_paniscus
ENSCSEG00000002635polr2a8293.961ENSPTRG00000008691POLR2A8293.968Pan_troglodytes
ENSCSEG00000002635polr2a8293.261ENSPANG00000024099-8293.270Papio_anubis
ENSCSEG00000002635polr2a8686.738ENSPKIG00000005727polr2a8586.103Paramormyrops_kingsleyae
ENSCSEG00000002635polr2a9891.981ENSPSIG00000014006POLR2A10091.884Pelodiscus_sinensis
ENSCSEG00000002635polr2a10096.700ENSPMGG00000019734polr2a9996.700Periophthalmus_magnuspinnatus
ENSCSEG00000002635polr2a8293.961ENSPEMG00000012521Polr2a8293.968Peromyscus_maniculatus_bairdii
ENSCSEG00000002635polr2a8693.672ENSPCIG00000028851-8293.672Phascolarctos_cinereus
ENSCSEG00000002635polr2a9997.361ENSPFOG00000007890polr2a9997.361Poecilia_formosa
ENSCSEG00000002635polr2a9997.361ENSPLAG00000007399polr2a9997.361Poecilia_latipinna
ENSCSEG00000002635polr2a10097.415ENSPMEG00000002071polr2a9997.415Poecilia_mexicana
ENSCSEG00000002635polr2a10097.457ENSPREG00000013122polr2a9997.457Poecilia_reticulata
ENSCSEG00000002635polr2a8293.793ENSPPYG00000007924-8293.800Pongo_abelii
ENSCSEG00000002635polr2a7495.132ENSPCAG00000006951-7495.132Procavia_capensis
ENSCSEG00000002635polr2a8293.961ENSPCOG00000025260-8293.968Propithecus_coquereli
ENSCSEG00000002635polr2a8293.482ENSPVAG00000005069-8293.490Pteropus_vampyrus
ENSCSEG00000002635polr2a10097.455ENSPNYG00000022340polr2a9997.455Pundamilia_nyererei
ENSCSEG00000002635polr2a10096.947ENSPNAG00000011237polr2a9996.947Pygocentrus_nattereri
ENSCSEG00000002635polr2a8293.731ENSRNOG00000028834Polr2a8293.738Rattus_norvegicus
ENSCSEG00000002635polr2a8293.961ENSRBIG00000002471-9193.428Rhinopithecus_bieti
ENSCSEG00000002635polr2a8293.793ENSRROG00000029583-8992.932Rhinopithecus_roxellana
ENSCSEG00000002635polr2a8450.646YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSCSEG00000002635polr2a8293.961ENSSBOG00000000808-8293.968Saimiri_boliviensis_boliviensis
ENSCSEG00000002635polr2a9393.669ENSSHAG00000002858-8493.676Sarcophilus_harrisii
ENSCSEG00000002635polr2a10096.528ENSSFOG00015023275polr2a10096.528Scleropages_formosus
ENSCSEG00000002635polr2a10095.013ENSSMAG00000009137polr2a9994.504Scophthalmus_maximus
ENSCSEG00000002635polr2a10098.080ENSSDUG00000020466polr2a9998.080Seriola_dumerili
ENSCSEG00000002635polr2a10098.028ENSSLDG00000020613polr2a9998.028Seriola_lalandi_dorsalis
ENSCSEG00000002635polr2a9787.500ENSSARG00000005875-9990.211Sorex_araneus
ENSCSEG00000002635polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSCSEG00000002635polr2a8292.924ENSSSCG00000028278-8292.932Sus_scrofa
ENSCSEG00000002635polr2a9891.816ENSTRUG00000012320polr2a8191.816Takifugu_rubripes
ENSCSEG00000002635polr2a9595.782ENSTNIG00000010136polr2a10095.782Tetraodon_nigroviridis
ENSCSEG00000002635polr2a7694.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSCSEG00000002635polr2a8292.117ENSTTRG00000014273-8292.126Tursiops_truncatus
ENSCSEG00000002635polr2a9393.595ENSUAMG00000014866-10090.909Ursus_americanus
ENSCSEG00000002635polr2a7491.061ENSUMAG00000015732-8391.061Ursus_maritimus
ENSCSEG00000002635polr2a6596.739ENSVPAG00000008842-7696.739Vicugna_pacos
ENSCSEG00000002635polr2a8293.731ENSVVUG00000027878-8393.738Vulpes_vulpes
ENSCSEG00000002635polr2a8193.707ENSXETG00000012465polr2a8293.715Xenopus_tropicalis
ENSCSEG00000002635polr2a9396.823ENSXCOG00000001804polr2a9496.823Xiphophorus_couchianus
ENSCSEG00000002635polr2a10097.405ENSXMAG00000015687polr2a9997.405Xiphophorus_maculatus

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