EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002675 (Gene tree)
Gene ID: 103390537
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3139 bases
Position: chr15:1411660-1414798
Accession: 103390537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004104	MTS	PF05175.14	9.5e-06	1	1
ENSCSEP00000004104	Met_10	PF02475.16	3.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004156	-	1749	XM_017039371	ENSCSEP00000004104	428 (aa)	XP_016894860	UPI00049781E7

Gene Model

Click here to download ENSCSEG00000002675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002675's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002675	trmt12	92	49.395	ENSG00000183665	TRMT12	92	49.395	Homo_sapiens
ENSCSEG00000002675	trmt12	95	69.853	ENSAPOG00000011979	trmt12	99	69.853	Acanthochromis_polyacanthus
ENSCSEG00000002675	trmt12	92	50.363	ENSAMEG00000019612	TRMT12	92	50.363	Ailuropoda_melanoleuca
ENSCSEG00000002675	trmt12	90	68.041	ENSACIG00000012982	trmt12	99	68.041	Amphilophus_citrinellus
ENSCSEG00000002675	trmt12	95	68.627	ENSAOCG00000020570	trmt12	99	70.207	Amphiprion_ocellaris
ENSCSEG00000002675	trmt12	95	68.873	ENSAPEG00000006335	trmt12	99	70.466	Amphiprion_percula
ENSCSEG00000002675	trmt12	95	68.627	ENSATEG00000018316	trmt12	99	68.627	Anabas_testudineus
ENSCSEG00000002675	trmt12	95	68.873	ENSACLG00000001008	trmt12	99	68.873	Astatotilapia_calliptera
ENSCSEG00000002675	trmt12	95	55.952	ENSAMXG00000040366	trmt12	99	55.952	Astyanax_mexicanus
ENSCSEG00000002675	trmt12	92	50.725	ENSBTAG00000020398	TRMT12	90	50.725	Bos_taurus
ENSCSEG00000002675	trmt12	92	48.426	ENSCJAG00000022174	TRMT12	92	48.426	Callithrix_jacchus
ENSCSEG00000002675	trmt12	92	50.363	ENSCAFG00000001040	TRMT12	94	50.363	Canis_familiaris
ENSCSEG00000002675	trmt12	92	50.363	ENSCAFG00020006500	TRMT12	94	50.363	Canis_lupus_dingo
ENSCSEG00000002675	trmt12	92	50.483	ENSCHIG00000016574	TRMT12	95	50.483	Capra_hircus
ENSCSEG00000002675	trmt12	92	50.365	ENSCPOG00000026520	TRMT12	93	50.365	Cavia_porcellus
ENSCSEG00000002675	trmt12	92	49.637	ENSCSAG00000018615	TRMT12	92	49.637	Chlorocebus_sabaeus
ENSCSEG00000002675	trmt12	92	51.765	ENSCPBG00000014290	TRMT12	93	51.765	Chrysemys_picta_bellii
ENSCSEG00000002675	trmt12	68	47.138	ENSCING00000019633	-	97	47.138	Ciona_intestinalis
ENSCSEG00000002675	trmt12	74	46.226	ENSCSAVG00000000415	-	97	46.226	Ciona_savignyi
ENSCSEG00000002675	trmt12	92	50.372	ENSCGRG00001014834	Trmt12	95	50.372	Cricetulus_griseus_chok1gshd
ENSCSEG00000002675	trmt12	95	63.480	ENSCVAG00000005590	trmt12	99	63.480	Cyprinodon_variegatus
ENSCSEG00000002675	trmt12	95	57.353	ENSDARG00000060338	trmt12	100	57.394	Danio_rerio
ENSCSEG00000002675	trmt12	92	47.458	ENSETEG00000009373	TRMT12	92	47.458	Echinops_telfairi
ENSCSEG00000002675	trmt12	92	50.363	ENSEASG00005022441	TRMT12	94	50.363	Equus_asinus_asinus
ENSCSEG00000002675	trmt12	92	49.272	ENSEEUG00000004844	TRMT12	93	49.272	Erinaceus_europaeus
ENSCSEG00000002675	trmt12	95	61.765	ENSELUG00000004240	trmt12	99	62.234	Esox_lucius
ENSCSEG00000002675	trmt12	62	58.657	ENSFALG00000003825	TRMT12	99	63.761	Ficedula_albicollis
ENSCSEG00000002675	trmt12	92	49.034	ENSFDAG00000016647	TRMT12	94	49.034	Fukomys_damarensis
ENSCSEG00000002675	trmt12	89	57.292	ENSFHEG00000017338	trmt12	96	57.292	Fundulus_heteroclitus
ENSCSEG00000002675	trmt12	78	57.670	ENSGALG00000006773	TRMT12	77	57.670	Gallus_gallus
ENSCSEG00000002675	trmt12	95	65.196	ENSGAFG00000020056	trmt12	99	65.196	Gambusia_affinis
ENSCSEG00000002675	trmt12	91	67.602	ENSGACG00000017351	trmt12	100	67.602	Gasterosteus_aculeatus
ENSCSEG00000002675	trmt12	92	52.370	ENSGAGG00000006032	TRMT12	95	52.370	Gopherus_agassizii
ENSCSEG00000002675	trmt12	95	68.382	ENSHBUG00000016412	trmt12	99	68.382	Haplochromis_burtoni
ENSCSEG00000002675	trmt12	92	49.395	ENSHGLG00000020498	TRMT12	94	49.395	Heterocephalus_glaber_female
ENSCSEG00000002675	trmt12	92	49.395	ENSHGLG00100020132	TRMT12	94	49.395	Heterocephalus_glaber_male
ENSCSEG00000002675	trmt12	95	62.255	ENSHCOG00000005050	trmt12	96	67.463	Hippocampus_comes
ENSCSEG00000002675	trmt12	95	54.745	ENSIPUG00000018011	trmt12	92	54.745	Ictalurus_punctatus
ENSCSEG00000002675	trmt12	92	49.880	ENSSTOG00000030617	TRMT12	94	49.880	Ictidomys_tridecemlineatus
ENSCSEG00000002675	trmt12	95	66.098	ENSKMAG00000000891	trmt12	99	66.098	Kryptolebias_marmoratus
ENSCSEG00000002675	trmt12	95	64.964	ENSLBEG00000028712	trmt12	99	64.964	Labrus_bergylta
ENSCSEG00000002675	trmt12	51	71.300	ENSLBEG00000017456	-	88	71.300	Labrus_bergylta
ENSCSEG00000002675	trmt12	94	50.588	ENSLACG00000015869	TRMT12	95	50.588	Latimeria_chalumnae
ENSCSEG00000002675	trmt12	94	55.665	ENSLOCG00000015290	trmt12	99	55.665	Lepisosteus_oculatus
ENSCSEG00000002675	trmt12	92	49.637	ENSLAFG00000012519	TRMT12	94	49.637	Loxodonta_africana
ENSCSEG00000002675	trmt12	92	49.395	ENSMMUG00000015490	TRMT12	93	49.395	Macaca_mulatta
ENSCSEG00000002675	trmt12	95	66.667	ENSMAMG00000020311	trmt12	99	66.667	Mastacembelus_armatus
ENSCSEG00000002675	trmt12	95	68.873	ENSMZEG00005007349	trmt12	99	68.873	Maylandia_zebra
ENSCSEG00000002675	trmt12	95	52.607	ENSMGAG00000004174	TRMT12	95	52.607	Meleagris_gallopavo
ENSCSEG00000002675	trmt12	95	67.157	ENSMMOG00000000412	trmt12	99	67.157	Mola_mola
ENSCSEG00000002675	trmt12	93	49.877	ENSMODG00000011798	-	85	49.877	Monodelphis_domestica
ENSCSEG00000002675	trmt12	92	51.621	ENSMODG00000021403	-	92	51.621	Monodelphis_domestica
ENSCSEG00000002675	trmt12	95	69.118	ENSMALG00000008668	trmt12	99	69.118	Monopterus_albus
ENSCSEG00000002675	trmt12	92	49.153	MGP_CAROLIEiJ_G0019820	Trmt12	93	49.153	Mus_caroli
ENSCSEG00000002675	trmt12	94	49.644	ENSMUSG00000037085	Trmt12	94	49.644	Mus_musculus
ENSCSEG00000002675	trmt12	92	50.363	MGP_PahariEiJ_G0019829	Trmt12	93	50.363	Mus_pahari
ENSCSEG00000002675	trmt12	94	49.169	MGP_SPRETEiJ_G0020717	Trmt12	94	49.169	Mus_spretus
ENSCSEG00000002675	trmt12	92	50.363	ENSMPUG00000019150	TRMT12	93	50.363	Mustela_putorius_furo
ENSCSEG00000002675	trmt12	92	49.758	ENSMLUG00000003753	TRMT12	94	49.758	Myotis_lucifugus
ENSCSEG00000002675	trmt12	92	49.517	ENSNGAG00000014548	Trmt12	95	49.517	Nannospalax_galili
ENSCSEG00000002675	trmt12	95	67.726	ENSNBRG00000021510	trmt12	99	67.726	Neolamprologus_brichardi
ENSCSEG00000002675	trmt12	92	45.631	ENSOPRG00000008067	TRMT12	92	45.631	Ochotona_princeps
ENSCSEG00000002675	trmt12	92	49.395	ENSODEG00000018933	TRMT12	94	49.395	Octodon_degus
ENSCSEG00000002675	trmt12	95	67.892	ENSONIG00000002614	trmt12	99	67.892	Oreochromis_niloticus
ENSCSEG00000002675	trmt12	92	47.666	ENSOANG00000009987	TRMT12	95	47.666	Ornithorhynchus_anatinus
ENSCSEG00000002675	trmt12	92	46.377	ENSOCUG00000026379	TRMT12	92	46.377	Oryctolagus_cuniculus
ENSCSEG00000002675	trmt12	95	62.500	ENSORLG00000001280	trmt12	99	63.725	Oryzias_latipes
ENSCSEG00000002675	trmt12	95	64.216	ENSORLG00020000708	trmt12	99	64.216	Oryzias_latipes_hni
ENSCSEG00000002675	trmt12	95	64.216	ENSORLG00015012344	trmt12	99	64.216	Oryzias_latipes_hsok
ENSCSEG00000002675	trmt12	95	63.725	ENSOMEG00000015267	trmt12	98	63.725	Oryzias_melastigma
ENSCSEG00000002675	trmt12	92	49.034	ENSOGAG00000015845	TRMT12	94	49.034	Otolemur_garnettii
ENSCSEG00000002675	trmt12	95	58.578	ENSPKIG00000004640	trmt12	98	59.694	Paramormyrops_kingsleyae
ENSCSEG00000002675	trmt12	56	58.736	ENSPSIG00000003476	TRMT12	99	58.736	Pelodiscus_sinensis
ENSCSEG00000002675	trmt12	95	61.520	ENSPMGG00000016356	trmt12	97	61.520	Periophthalmus_magnuspinnatus
ENSCSEG00000002675	trmt12	92	50.750	ENSPCIG00000002967	TRMT12	85	50.750	Phascolarctos_cinereus
ENSCSEG00000002675	trmt12	93	64.500	ENSPFOG00000016931	trmt12	96	64.500	Poecilia_formosa
ENSCSEG00000002675	trmt12	95	65.037	ENSPLAG00000020621	trmt12	100	65.037	Poecilia_latipinna
ENSCSEG00000002675	trmt12	95	66.667	ENSPMEG00000000818	trmt12	99	66.667	Poecilia_mexicana
ENSCSEG00000002675	trmt12	95	65.037	ENSPREG00000011621	trmt12	99	65.037	Poecilia_reticulata
ENSCSEG00000002675	trmt12	92	49.879	ENSPPYG00000018866	TRMT12	92	49.879	Pongo_abelii
ENSCSEG00000002675	trmt12	92	49.275	ENSPCAG00000000556	TRMT12	93	49.275	Procavia_capensis
ENSCSEG00000002675	trmt12	92	49.879	ENSPVAG00000009149	TRMT12	93	49.879	Pteropus_vampyrus
ENSCSEG00000002675	trmt12	90	68.557	ENSPNYG00000010696	trmt12	99	68.557	Pundamilia_nyererei
ENSCSEG00000002675	trmt12	95	56.563	ENSPNAG00000019028	trmt12	99	56.563	Pygocentrus_nattereri
ENSCSEG00000002675	trmt12	92	49.637	ENSRNOG00000008978	Trmt12	95	49.637	Rattus_norvegicus
ENSCSEG00000002675	trmt12	92	50.500	ENSSHAG00000003345	TRMT12	92	50.500	Sarcophilus_harrisii
ENSCSEG00000002675	trmt12	95	56.731	ENSSFOG00015006090	trmt12	99	56.731	Scleropages_formosus
ENSCSEG00000002675	trmt12	95	70.343	ENSSMAG00000013247	trmt12	99	70.343	Scophthalmus_maximus
ENSCSEG00000002675	trmt12	95	70.588	ENSSDUG00000006168	trmt12	99	70.588	Seriola_dumerili
ENSCSEG00000002675	trmt12	95	70.343	ENSSLDG00000025007	trmt12	99	70.343	Seriola_lalandi_dorsalis
ENSCSEG00000002675	trmt12	95	51.152	ENSSPUG00000005321	TRMT12	96	51.152	Sphenodon_punctatus
ENSCSEG00000002675	trmt12	95	69.363	ENSSPAG00000009435	trmt12	97	69.363	Stegastes_partitus
ENSCSEG00000002675	trmt12	94	48.357	ENSTGUG00000002280	TRMT12	99	49.881	Taeniopygia_guttata
ENSCSEG00000002675	trmt12	96	65.228	ENSTRUG00000011548	trmt12	100	65.228	Takifugu_rubripes
ENSCSEG00000002675	trmt12	95	62.195	ENSTNIG00000016866	trmt12	99	62.195	Tetraodon_nigroviridis
ENSCSEG00000002675	trmt12	92	49.879	ENSUAMG00000002067	TRMT12	95	49.879	Ursus_americanus
ENSCSEG00000002675	trmt12	92	49.153	ENSVPAG00000006519	TRMT12	93	49.153	Vicugna_pacos
ENSCSEG00000002675	trmt12	92	50.363	ENSVVUG00000016790	TRMT12	93	50.363	Vulpes_vulpes
ENSCSEG00000002675	trmt12	94	51.843	ENSXETG00000009641	trmt12	95	51.843	Xenopus_tropicalis
ENSCSEG00000002675	trmt12	95	65.122	ENSXCOG00000016505	trmt12	99	65.122	Xiphophorus_couchianus
ENSCSEG00000002675	trmt12	95	65.037	ENSXMAG00000025318	trmt12	99	65.037	Xiphophorus_maculatus