EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002755 (Gene tree)
Gene ID: 103387432
Gene Symbol: -
Alias: -
Full Name: tetratricopeptide repeat protein 31-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 8581 bases
Position: chr1:25736656-25745236
Accession: 103387432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004235	RRM_1	PF00076.22	6.4e-11	1	1
ENSCSEP00000004245	RRM_1	PF00076.22	6.4e-11	1	1
ENSCSEP00000004232	RRM_1	PF00076.22	6.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004290	-	3332	-	ENSCSEP00000004235	581 (aa)	-	UPI000495E3DB
ENSCSET00000004300	-	3159	XM_017039086	ENSCSEP00000004245	581 (aa)	XP_016894575	UPI000495E3DB
ENSCSET00000004287	-	3048	XM_008322085	ENSCSEP00000004232	608 (aa)	XP_008320307	UPI000496650A

Gene Model

Click here to download ENSCSEG00000002755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002755's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002755	-	99	49.922	ENSAPOG00000022403	-	88	55.335	Acanthochromis_polyacanthus
ENSCSEG00000002755	-	71	39.189	ENSAPOG00000001034	-	92	39.189	Acanthochromis_polyacanthus
ENSCSEG00000002755	-	75	36.910	ENSAPOG00000005058	si:dkey-33c12.4	73	35.046	Acanthochromis_polyacanthus
ENSCSEG00000002755	-	58	40.456	ENSAOCG00000020066	si:dkey-33c12.4	73	35.130	Amphiprion_ocellaris
ENSCSEG00000002755	-	99	51.501	ENSAOCG00000000431	-	88	55.676	Amphiprion_ocellaris
ENSCSEG00000002755	-	99	51.501	ENSAPEG00000023603	-	88	56.036	Amphiprion_percula
ENSCSEG00000002755	-	78	37.370	ENSATEG00000018885	si:dkey-33c12.4	77	36.245	Anabas_testudineus
ENSCSEG00000002755	-	76	58.559	ENSATEG00000018302	-	84	54.707	Anabas_testudineus
ENSCSEG00000002755	-	95	51.414	ENSACLG00000003019	-	99	51.987	Astatotilapia_calliptera
ENSCSEG00000002755	-	63	40.267	ENSACLG00000014192	si:dkey-33c12.4	80	34.515	Astatotilapia_calliptera
ENSCSEG00000002755	-	56	35.443	ENSAMXG00000041967	zgc:123010	83	32.990	Astyanax_mexicanus
ENSCSEG00000002755	-	83	38.966	ENSAMXG00000010871	si:dkey-33c12.4	73	40.462	Astyanax_mexicanus
ENSCSEG00000002755	-	71	32.212	ENSCPBG00000024454	-	70	30.314	Chrysemys_picta_bellii
ENSCSEG00000002755	-	96	50.248	ENSCVAG00000004187	-	100	49.842	Cyprinodon_variegatus
ENSCSEG00000002755	-	56	36.709	ENSDARG00000039082	zgc:123010	82	36.709	Danio_rerio
ENSCSEG00000002755	-	84	40.200	ENSDARG00000057890	si:dkey-33c12.4	76	39.815	Danio_rerio
ENSCSEG00000002755	-	56	31.385	ENSEBUG00000001368	-	59	30.070	Eptatretus_burgeri
ENSCSEG00000002755	-	52	39.881	ENSELUG00000021447	-	90	31.818	Esox_lucius
ENSCSEG00000002755	-	88	40.713	ENSELUG00000001633	-	76	40.678	Esox_lucius
ENSCSEG00000002755	-	94	36.471	ENSELUG00000002009	si:dkey-33c12.4	71	55.484	Esox_lucius
ENSCSEG00000002755	-	52	34.211	ENSFALG00000008867	-	94	33.553	Ficedula_albicollis
ENSCSEG00000002755	-	59	39.193	ENSFHEG00000005521	si:dkey-33c12.4	76	34.924	Fundulus_heteroclitus
ENSCSEG00000002755	-	90	47.979	ENSFHEG00000009983	-	96	46.399	Fundulus_heteroclitus
ENSCSEG00000002755	-	97	50.897	ENSGAFG00000016594	-	81	54.731	Gambusia_affinis
ENSCSEG00000002755	-	57	40.533	ENSGAFG00000017596	si:dkey-33c12.4	72	34.185	Gambusia_affinis
ENSCSEG00000002755	-	55	46.766	ENSGACG00000004936	-	89	46.766	Gasterosteus_aculeatus
ENSCSEG00000002755	-	63	41.081	ENSHBUG00000010735	si:dkey-33c12.4	76	35.028	Haplochromis_burtoni
ENSCSEG00000002755	-	72	45.215	ENSIPUG00000005998	si:dkey-33c12.4	78	41.101	Ictalurus_punctatus
ENSCSEG00000002755	-	89	32.784	ENSKMAG00000016610	si:dkey-33c12.4	74	33.396	Kryptolebias_marmoratus
ENSCSEG00000002755	-	99	49.226	ENSKMAG00000006468	-	84	53.916	Kryptolebias_marmoratus
ENSCSEG00000002755	-	62	39.503	ENSLBEG00000017203	-	82	33.525	Labrus_bergylta
ENSCSEG00000002755	-	90	51.119	ENSLBEG00000028046	-	78	49.538	Labrus_bergylta
ENSCSEG00000002755	-	61	39.489	ENSLBEG00000021088	-	53	38.043	Labrus_bergylta
ENSCSEG00000002755	-	86	34.933	ENSLACG00000004602	-	70	42.560	Latimeria_chalumnae
ENSCSEG00000002755	-	55	36.709	ENSLACG00000009001	zgc:123010	55	38.372	Latimeria_chalumnae
ENSCSEG00000002755	-	56	36.735	ENSLOCG00000008967	zgc:123010	72	33.846	Lepisosteus_oculatus
ENSCSEG00000002755	-	83	43.033	ENSLOCG00000001861	-	74	42.533	Lepisosteus_oculatus
ENSCSEG00000002755	-	80	38.710	ENSMAMG00000000111	si:dkey-33c12.4	77	37.798	Mastacembelus_armatus
ENSCSEG00000002755	-	89	56.061	ENSMAMG00000004311	-	82	55.849	Mastacembelus_armatus
ENSCSEG00000002755	-	63	41.033	ENSMZEG00005014276	si:dkey-33c12.4	76	34.972	Maylandia_zebra
ENSCSEG00000002755	-	95	52.413	ENSMZEG00005000585	-	99	51.987	Maylandia_zebra
ENSCSEG00000002755	-	94	55.635	ENSMALG00000003167	-	81	55.456	Monopterus_albus
ENSCSEG00000002755	-	58	43.429	ENSMALG00000002265	si:dkey-33c12.4	78	37.148	Monopterus_albus
ENSCSEG00000002755	-	98	52.195	ENSONIG00000007538	-	97	65.278	Oreochromis_niloticus
ENSCSEG00000002755	-	97	49.918	ENSORLG00000030385	-	97	47.114	Oryzias_latipes
ENSCSEG00000002755	-	100	48.336	ENSORLG00015008400	-	99	45.675	Oryzias_latipes_hsok
ENSCSEG00000002755	-	96	50.247	ENSOMEG00000009428	-	79	52.897	Oryzias_melastigma
ENSCSEG00000002755	-	70	34.831	ENSPKIG00000015521	zgc:123010	84	38.028	Paramormyrops_kingsleyae
ENSCSEG00000002755	-	90	42.056	ENSPKIG00000011819	-	72	41.011	Paramormyrops_kingsleyae
ENSCSEG00000002755	-	84	55.668	ENSPFOG00000017092	-	98	55.870	Poecilia_formosa
ENSCSEG00000002755	-	97	52.138	ENSPMEG00000009905	-	82	56.238	Poecilia_mexicana
ENSCSEG00000002755	-	97	50.987	ENSPREG00000016861	-	84	54.376	Poecilia_reticulata
ENSCSEG00000002755	-	63	41.033	ENSPNYG00000018262	si:dkey-33c12.4	76	34.972	Pundamilia_nyererei
ENSCSEG00000002755	-	95	52.579	ENSPNYG00000001047	-	99	52.146	Pundamilia_nyererei
ENSCSEG00000002755	-	71	45.131	ENSPNAG00000018386	si:dkey-33c12.4	74	41.714	Pygocentrus_nattereri
ENSCSEG00000002755	-	60	35.443	ENSPNAG00000007579	zgc:123010	81	32.990	Pygocentrus_nattereri
ENSCSEG00000002755	-	71	43.171	ENSSFOG00015005186	-	77	39.777	Scleropages_formosus
ENSCSEG00000002755	-	82	39.130	ENSSFOG00015009199	-	71	38.986	Scleropages_formosus
ENSCSEG00000002755	-	99	56.431	ENSSMAG00000010960	-	98	55.846	Scophthalmus_maximus
ENSCSEG00000002755	-	73	37.037	ENSSMAG00000002904	zgc:123010	82	37.037	Scophthalmus_maximus
ENSCSEG00000002755	-	84	35.526	ENSSMAG00000008147	si:dkey-33c12.4	76	34.783	Scophthalmus_maximus
ENSCSEG00000002755	-	94	55.428	ENSSDUG00000010976	-	82	61.027	Seriola_dumerili
ENSCSEG00000002755	-	70	41.981	ENSSDUG00000003213	si:dkey-33c12.4	80	37.828	Seriola_dumerili
ENSCSEG00000002755	-	92	59.665	ENSSLDG00000012846	-	85	60.456	Seriola_lalandi_dorsalis
ENSCSEG00000002755	-	70	41.232	ENSSLDG00000009448	si:dkey-33c12.4	74	37.383	Seriola_lalandi_dorsalis
ENSCSEG00000002755	-	99	50.789	ENSSPAG00000004843	-	88	54.741	Stegastes_partitus
ENSCSEG00000002755	-	65	39.320	ENSSPAG00000022577	-	74	36.127	Stegastes_partitus
ENSCSEG00000002755	-	98	39.861	ENSTRUG00000000057	-	98	39.644	Takifugu_rubripes
ENSCSEG00000002755	-	59	40.058	ENSXMAG00000018535	si:dkey-33c12.4	72	34.122	Xiphophorus_maculatus