EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000002794 (Gene tree)
Gene ID: 103381084
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 17574 bases
Position: chr7:9161363-9178936
Accession: 103381084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004364	GTP_EFTU	PF00009.27	3.9e-47	1	1
ENSCSEP00000004350	GTP_EFTU	PF00009.27	4.6e-47	1	1
ENSCSEP00000004326	GTP_EFTU	PF00009.27	5.1e-47	1	1
ENSCSEP00000004335	GTP_EFTU	PF00009.27	5.9e-47	1	1
ENSCSEP00000004364	GTP_EFTU_D2	PF03144.25	1.5e-08	1	1
ENSCSEP00000004350	GTP_EFTU_D2	PF03144.25	1.7e-08	1	1
ENSCSEP00000004326	GTP_EFTU_D2	PF03144.25	1.9e-08	1	1
ENSCSEP00000004335	GTP_EFTU_D2	PF03144.25	2e-08	1	1
ENSCSEP00000004364	GTP_EFTU_D3	PF03143.17	1.4e-28	1	1
ENSCSEP00000004350	GTP_EFTU_D3	PF03143.17	1.7e-28	1	1
ENSCSEP00000004326	GTP_EFTU_D3	PF03143.17	2.2e-28	1	1
ENSCSEP00000004335	GTP_EFTU_D3	PF03143.17	2.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004389	-	2937	XM_008313279	ENSCSEP00000004335	868 (aa)	XP_008311501	-
ENSCSET00000004405	-	2936	-	ENSCSEP00000004350	744 (aa)	-	-
ENSCSET00000004381	-	3065	-	ENSCSEP00000004326	787 (aa)	-	-
ENSCSET00000004416	-	2876	XM_017033725	ENSCSEP00000004361	724 (aa)	XP_016889214	-
ENSCSET00000004419	-	2013	-	ENSCSEP00000004364	670 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000002794's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000002794	hbs1l	63	41.876	ENSCSEG00000008011	-	94	41.876
ENSCSEG00000002794	hbs1l	63	36.036	ENSCSEG00000019807	si:dkey-37o8.1	95	36.465
ENSCSEG00000002794	hbs1l	57	39.747	ENSCSEG00000007972	-	95	39.747
ENSCSEG00000002794	hbs1l	57	39.646	ENSCSEG00000007992	-	95	39.646
ENSCSEG00000002794	hbs1l	63	41.609	ENSCSEG00000000544	eef1a1b	94	41.609
ENSCSEG00000002794	hbs1l	63	40.706	ENSCSEG00000019708	GSPT1	74	40.706
ENSCSEG00000002794	hbs1l	63	41.553	ENSCSEG00000008004	-	94	41.553

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002794	hbs1l	94	75.975	ENSG00000112339	HBS1L	95	86.957	Homo_sapiens
ENSCSEG00000002794	hbs1l	87	73.425	ENSAPOG00000013169	hbs1l	97	73.425	Acanthochromis_polyacanthus
ENSCSEG00000002794	hbs1l	94	71.955	ENSAMEG00000009749	HBS1L	99	72.034	Ailuropoda_melanoleuca
ENSCSEG00000002794	hbs1l	79	89.924	ENSACIG00000017087	hbs1l	91	89.493	Amphilophus_citrinellus
ENSCSEG00000002794	hbs1l	94	85.369	ENSAPEG00000008320	hbs1l	99	85.653	Amphiprion_percula
ENSCSEG00000002794	hbs1l	94	87.074	ENSATEG00000004459	hbs1l	99	87.216	Anabas_testudineus
ENSCSEG00000002794	hbs1l	92	71.037	ENSAPLG00000007791	HBS1L	99	71.037	Anas_platyrhynchos
ENSCSEG00000002794	hbs1l	94	71.206	ENSACAG00000010120	HBS1L	99	70.780	Anolis_carolinensis
ENSCSEG00000002794	hbs1l	93	76.406	ENSANAG00000038076	HBS1L	99	78.309	Aotus_nancymaae
ENSCSEG00000002794	hbs1l	94	84.736	ENSACLG00000010469	hbs1l	99	85.164	Astatotilapia_calliptera
ENSCSEG00000002794	hbs1l	94	80.000	ENSAMXG00000004260	hbs1l	97	85.553	Astyanax_mexicanus
ENSCSEG00000002794	hbs1l	94	72.881	ENSBTAG00000020174	HBS1L	99	72.599	Bos_taurus
ENSCSEG00000002794	hbs1l	71	46.092	WBGene00010622	K07A12.4	99	40.246	Caenorhabditis_elegans
ENSCSEG00000002794	hbs1l	94	76.553	ENSCJAG00000007678	HBS1L	99	78.467	Callithrix_jacchus
ENSCSEG00000002794	hbs1l	94	71.773	ENSCAFG00000000226	HBS1L	99	71.186	Canis_familiaris
ENSCSEG00000002794	hbs1l	94	71.773	ENSCAFG00020021904	HBS1L	99	71.186	Canis_lupus_dingo
ENSCSEG00000002794	hbs1l	94	72.380	ENSCHIG00000010299	HBS1L	99	72.096	Capra_hircus
ENSCSEG00000002794	hbs1l	94	75.389	ENSTSYG00000007089	HBS1L	96	78.723	Carlito_syrichta
ENSCSEG00000002794	hbs1l	94	62.197	ENSCPOG00000007015	HBS1L	99	62.482	Cavia_porcellus
ENSCSEG00000002794	hbs1l	94	75.000	ENSCCAG00000033863	HBS1L	99	75.125	Cebus_capucinus
ENSCSEG00000002794	hbs1l	94	76.480	ENSCATG00000043042	HBS1L	99	76.480	Cercocebus_atys
ENSCSEG00000002794	hbs1l	94	71.146	ENSCLAG00000004937	HBS1L	99	71.105	Chinchilla_lanigera
ENSCSEG00000002794	hbs1l	94	72.546	ENSCSAG00000016791	HBS1L	99	71.693	Chlorocebus_sabaeus
ENSCSEG00000002794	hbs1l	92	57.143	ENSCHOG00000001852	HBS1L	99	57.710	Choloepus_hoffmanni
ENSCSEG00000002794	hbs1l	94	71.915	ENSCPBG00000017635	HBS1L	99	71.915	Chrysemys_picta_bellii
ENSCSEG00000002794	hbs1l	94	48.895	ENSCING00000005592	-	99	48.481	Ciona_intestinalis
ENSCSEG00000002794	hbs1l	89	61.159	ENSCSAVG00000002297	-	99	61.159	Ciona_savignyi
ENSCSEG00000002794	hbs1l	94	76.168	ENSCANG00000031208	HBS1L	99	76.168	Colobus_angolensis_palliatus
ENSCSEG00000002794	hbs1l	94	72.702	ENSCGRG00001024531	Hbs1l	99	72.141	Cricetulus_griseus_chok1gshd
ENSCSEG00000002794	hbs1l	94	72.702	ENSCGRG00000017361	Hbs1l	99	72.141	Cricetulus_griseus_crigri
ENSCSEG00000002794	hbs1l	94	83.642	ENSCVAG00000001462	hbs1l	99	83.926	Cyprinodon_variegatus
ENSCSEG00000002794	hbs1l	94	79.000	ENSDARG00000036778	hbs1l	99	79.000	Danio_rerio
ENSCSEG00000002794	hbs1l	94	71.492	ENSDORG00000005958	Hbs1l	99	71.492	Dipodomys_ordii
ENSCSEG00000002794	hbs1l	94	53.846	FBgn0042712	HBS1	98	51.220	Drosophila_melanogaster
ENSCSEG00000002794	hbs1l	94	66.856	ENSETEG00000000913	HBS1L	99	66.006	Echinops_telfairi
ENSCSEG00000002794	hbs1l	94	64.196	ENSEBUG00000010759	hbs1l	100	65.500	Eptatretus_burgeri
ENSCSEG00000002794	hbs1l	94	71.308	ENSEASG00005011148	HBS1L	99	70.886	Equus_asinus_asinus
ENSCSEG00000002794	hbs1l	94	74.845	ENSECAG00000004470	HBS1L	99	74.845	Equus_caballus
ENSCSEG00000002794	hbs1l	94	68.321	ENSEEUG00000013582	HBS1L	99	68.321	Erinaceus_europaeus
ENSCSEG00000002794	hbs1l	86	71.007	ENSELUG00000006444	hbs1l	96	76.471	Esox_lucius
ENSCSEG00000002794	hbs1l	94	76.599	ENSFCAG00000001810	HBS1L	99	80.925	Felis_catus
ENSCSEG00000002794	hbs1l	87	73.658	ENSFALG00000011898	HBS1L	99	73.658	Ficedula_albicollis
ENSCSEG00000002794	hbs1l	94	71.388	ENSFDAG00000011841	HBS1L	99	71.388	Fukomys_damarensis
ENSCSEG00000002794	hbs1l	94	86.709	ENSFHEG00000006942	hbs1l	99	85.064	Fundulus_heteroclitus
ENSCSEG00000002794	hbs1l	94	78.745	ENSGMOG00000011843	hbs1l	100	78.745	Gadus_morhua
ENSCSEG00000002794	hbs1l	94	72.096	ENSGALG00000013962	HBS1L	99	72.096	Gallus_gallus
ENSCSEG00000002794	hbs1l	94	84.922	ENSGAFG00000004157	hbs1l	99	85.349	Gambusia_affinis
ENSCSEG00000002794	hbs1l	94	83.807	ENSGACG00000011035	hbs1l	100	83.807	Gasterosteus_aculeatus
ENSCSEG00000002794	hbs1l	94	71.064	ENSGAGG00000002033	HBS1L	99	71.064	Gopherus_agassizii
ENSCSEG00000002794	hbs1l	79	75.422	ENSGGOG00000034956	-	93	83.871	Gorilla_gorilla
ENSCSEG00000002794	hbs1l	94	84.879	ENSHBUG00000013424	hbs1l	99	85.307	Haplochromis_burtoni
ENSCSEG00000002794	hbs1l	94	71.489	ENSHGLG00000000516	HBS1L	99	70.739	Heterocephalus_glaber_female
ENSCSEG00000002794	hbs1l	94	71.489	ENSHGLG00100003550	HBS1L	99	70.739	Heterocephalus_glaber_male
ENSCSEG00000002794	hbs1l	95	80.337	ENSHCOG00000007581	hbs1l	95	79.661	Hippocampus_comes
ENSCSEG00000002794	hbs1l	94	78.571	ENSIPUG00000010748	hbs1l	99	77.682	Ictalurus_punctatus
ENSCSEG00000002794	hbs1l	94	76.087	ENSSTOG00000007551	HBS1L	99	76.087	Ictidomys_tridecemlineatus
ENSCSEG00000002794	hbs1l	93	72.006	ENSJJAG00000017024	-	97	72.006	Jaculus_jaculus
ENSCSEG00000002794	hbs1l	94	57.365	ENSJJAG00000012660	-	99	57.101	Jaculus_jaculus
ENSCSEG00000002794	hbs1l	94	85.857	ENSKMAG00000012130	hbs1l	99	87.941	Kryptolebias_marmoratus
ENSCSEG00000002794	hbs1l	94	87.304	ENSLBEG00000002784	hbs1l	100	88.193	Labrus_bergylta
ENSCSEG00000002794	hbs1l	71	79.253	ENSLACG00000004528	HBS1L	99	78.367	Latimeria_chalumnae
ENSCSEG00000002794	hbs1l	94	74.619	ENSLOCG00000016221	hbs1l	99	74.619	Lepisosteus_oculatus
ENSCSEG00000002794	hbs1l	94	69.590	ENSLAFG00000007835	HBS1L	100	69.645	Loxodonta_africana
ENSCSEG00000002794	hbs1l	94	76.443	ENSMFAG00000003766	HBS1L	99	78.532	Macaca_fascicularis
ENSCSEG00000002794	hbs1l	94	73.028	ENSMMUG00000004802	HBS1L	99	78.388	Macaca_mulatta
ENSCSEG00000002794	hbs1l	94	76.443	ENSMNEG00000043942	HBS1L	99	78.532	Macaca_nemestrina
ENSCSEG00000002794	hbs1l	94	76.480	ENSMLEG00000043218	HBS1L	99	76.480	Mandrillus_leucophaeus
ENSCSEG00000002794	hbs1l	94	85.227	ENSMAMG00000016498	hbs1l	99	85.653	Mastacembelus_armatus
ENSCSEG00000002794	hbs1l	79	89.354	ENSMZEG00005024018	-	90	89.139	Maylandia_zebra
ENSCSEG00000002794	hbs1l	94	84.736	ENSMZEG00005015575	hbs1l	99	85.164	Maylandia_zebra
ENSCSEG00000002794	hbs1l	93	70.613	ENSMGAG00000013065	HBS1L	99	70.756	Meleagris_gallopavo
ENSCSEG00000002794	hbs1l	94	72.482	ENSMAUG00000001077	Hbs1l	99	72.083	Mesocricetus_auratus
ENSCSEG00000002794	hbs1l	93	75.351	ENSMICG00000001533	-	99	75.351	Microcebus_murinus
ENSCSEG00000002794	hbs1l	94	63.889	ENSMICG00000030043	-	95	82.162	Microcebus_murinus
ENSCSEG00000002794	hbs1l	94	72.113	ENSMOCG00000023038	Hbs1l	99	71.806	Microtus_ochrogaster
ENSCSEG00000002794	hbs1l	91	86.530	ENSMMOG00000015507	hbs1l	99	87.116	Mola_mola
ENSCSEG00000002794	hbs1l	94	72.340	ENSMODG00000017499	HBS1L	99	72.057	Monodelphis_domestica
ENSCSEG00000002794	hbs1l	94	87.358	ENSMALG00000010768	hbs1l	99	87.358	Monopterus_albus
ENSCSEG00000002794	hbs1l	94	72.472	MGP_CAROLIEiJ_G0015162	Hbs1l	99	72.269	Mus_caroli
ENSCSEG00000002794	hbs1l	94	72.434	ENSMUSG00000019977	Hbs1l	100	90.323	Mus_musculus
ENSCSEG00000002794	hbs1l	94	72.409	MGP_PahariEiJ_G0023782	Hbs1l	99	72.129	Mus_pahari
ENSCSEG00000002794	hbs1l	94	72.409	MGP_SPRETEiJ_G0015970	Hbs1l	99	72.129	Mus_spretus
ENSCSEG00000002794	hbs1l	94	72.482	ENSMPUG00000014810	HBS1L	99	72.175	Mustela_putorius_furo
ENSCSEG00000002794	hbs1l	94	71.813	ENSMLUG00000010618	HBS1L	99	71.246	Myotis_lucifugus
ENSCSEG00000002794	hbs1l	94	71.610	ENSNGAG00000015184	Hbs1l	99	71.530	Nannospalax_galili
ENSCSEG00000002794	hbs1l	94	85.043	ENSNBRG00000020095	hbs1l	99	85.043	Neolamprologus_brichardi
ENSCSEG00000002794	hbs1l	94	75.663	ENSNLEG00000014721	HBS1L	99	77.716	Nomascus_leucogenys
ENSCSEG00000002794	hbs1l	77	83.756	ENSMEUG00000003907	HBS1L	81	83.756	Notamacropus_eugenii
ENSCSEG00000002794	hbs1l	71	81.667	ENSOPRG00000013595	HBS1L	71	81.667	Ochotona_princeps
ENSCSEG00000002794	hbs1l	94	71.550	ENSODEG00000008959	HBS1L	99	71.449	Octodon_degus
ENSCSEG00000002794	hbs1l	94	84.736	ENSONIG00000000460	hbs1l	99	84.681	Oreochromis_niloticus
ENSCSEG00000002794	hbs1l	94	70.655	ENSOANG00000002684	-	99	70.513	Ornithorhynchus_anatinus
ENSCSEG00000002794	hbs1l	94	68.563	ENSOCUG00000011619	HBS1L	99	70.418	Oryctolagus_cuniculus
ENSCSEG00000002794	hbs1l	94	83.073	ENSORLG00000016559	hbs1l	99	82.930	Oryzias_latipes
ENSCSEG00000002794	hbs1l	94	83.073	ENSORLG00020003827	hbs1l	99	83.073	Oryzias_latipes_hni
ENSCSEG00000002794	hbs1l	94	83.357	ENSORLG00015023105	hbs1l	99	83.357	Oryzias_latipes_hsok
ENSCSEG00000002794	hbs1l	94	83.926	ENSOMEG00000016715	hbs1l	99	83.926	Oryzias_melastigma
ENSCSEG00000002794	hbs1l	94	72.624	ENSOGAG00000012604	HBS1L	99	71.773	Otolemur_garnettii
ENSCSEG00000002794	hbs1l	94	72.238	ENSOARG00000005671	-	99	71.955	Ovis_aries
ENSCSEG00000002794	hbs1l	94	72.482	ENSOARG00000014798	-	99	72.199	Ovis_aries
ENSCSEG00000002794	hbs1l	94	76.131	ENSPPAG00000029900	HBS1L	97	78.821	Pan_paniscus
ENSCSEG00000002794	hbs1l	94	76.599	ENSPPRG00000005285	HBS1L	95	82.979	Panthera_pardus
ENSCSEG00000002794	hbs1l	94	76.287	ENSPTIG00000015803	HBS1L	95	82.979	Panthera_tigris_altaica
ENSCSEG00000002794	hbs1l	93	76.250	ENSPTRG00000018630	HBS1L	97	78.821	Pan_troglodytes
ENSCSEG00000002794	hbs1l	93	76.250	ENSPANG00000007075	HBS1L	97	78.125	Papio_anubis
ENSCSEG00000002794	hbs1l	94	75.852	ENSPKIG00000023171	hbs1l	97	80.074	Paramormyrops_kingsleyae
ENSCSEG00000002794	hbs1l	81	69.558	ENSPSIG00000016467	HBS1L	97	69.558	Pelodiscus_sinensis
ENSCSEG00000002794	hbs1l	94	81.089	ENSPMGG00000018051	hbs1l	96	90.426	Periophthalmus_magnuspinnatus
ENSCSEG00000002794	hbs1l	94	72.355	ENSPEMG00000014369	Hbs1l	99	71.930	Peromyscus_maniculatus_bairdii
ENSCSEG00000002794	hbs1l	94	64.164	ENSPMAG00000002516	hbs1l	99	63.494	Petromyzon_marinus
ENSCSEG00000002794	hbs1l	94	85.269	ENSPFOG00000021764	hbs1l	99	85.694	Poecilia_formosa
ENSCSEG00000002794	hbs1l	94	85.369	ENSPLAG00000006193	hbs1l	99	85.795	Poecilia_latipinna
ENSCSEG00000002794	hbs1l	94	85.653	ENSPMEG00000000925	hbs1l	99	86.080	Poecilia_mexicana
ENSCSEG00000002794	hbs1l	94	84.943	ENSPREG00000011270	hbs1l	99	85.369	Poecilia_reticulata
ENSCSEG00000002794	hbs1l	94	72.340	ENSPPYG00000017027	HBS1L	99	71.489	Pongo_abelii
ENSCSEG00000002794	hbs1l	79	78.236	ENSPCAG00000007002	HBS1L	79	77.963	Procavia_capensis
ENSCSEG00000002794	hbs1l	79	76.762	ENSPVAG00000015229	HBS1L	85	75.881	Pteropus_vampyrus
ENSCSEG00000002794	hbs1l	94	84.593	ENSPNYG00000013360	hbs1l	99	85.021	Pundamilia_nyererei
ENSCSEG00000002794	hbs1l	94	82.188	ENSPNAG00000026721	hbs1l	96	82.188	Pygocentrus_nattereri
ENSCSEG00000002794	hbs1l	94	72.287	ENSRNOG00000014531	Hbs1l	99	72.287	Rattus_norvegicus
ENSCSEG00000002794	hbs1l	94	72.663	ENSRBIG00000004484	HBS1L	97	74.586	Rhinopithecus_bieti
ENSCSEG00000002794	hbs1l	93	76.406	ENSRROG00000026176	HBS1L	97	78.453	Rhinopithecus_roxellana
ENSCSEG00000002794	hbs1l	63	38.202	YKR084C	-	73	38.427	Saccharomyces_cerevisiae
ENSCSEG00000002794	hbs1l	94	65.131	ENSSBOG00000016930	-	98	79.679	Saimiri_boliviensis_boliviensis
ENSCSEG00000002794	hbs1l	93	76.480	ENSSBOG00000019696	-	95	82.979	Saimiri_boliviensis_boliviensis
ENSCSEG00000002794	hbs1l	94	71.893	ENSSHAG00000013509	HBS1L	99	71.671	Sarcophilus_harrisii
ENSCSEG00000002794	hbs1l	94	75.966	ENSSFOG00015017544	hbs1l	96	76.109	Scleropages_formosus
ENSCSEG00000002794	hbs1l	94	85.877	ENSSMAG00000010621	hbs1l	99	86.020	Scophthalmus_maximus
ENSCSEG00000002794	hbs1l	94	87.784	ENSSDUG00000012974	hbs1l	99	88.210	Seriola_dumerili
ENSCSEG00000002794	hbs1l	94	87.642	ENSSLDG00000004960	hbs1l	99	88.235	Seriola_lalandi_dorsalis
ENSCSEG00000002794	hbs1l	92	71.366	ENSSARG00000006747	HBS1L	99	70.520	Sorex_araneus
ENSCSEG00000002794	hbs1l	94	70.455	ENSSPUG00000012389	HBS1L	99	70.170	Sphenodon_punctatus
ENSCSEG00000002794	hbs1l	91	71.806	ENSSSCG00000004169	HBS1L	100	71.125	Sus_scrofa
ENSCSEG00000002794	hbs1l	94	70.780	ENSTGUG00000011507	HBS1L	99	70.597	Taeniopygia_guttata
ENSCSEG00000002794	hbs1l	94	83.357	ENSTRUG00000016128	hbs1l	89	94.595	Takifugu_rubripes
ENSCSEG00000002794	hbs1l	94	82.812	ENSTNIG00000016320	hbs1l	99	83.381	Tetraodon_nigroviridis
ENSCSEG00000002794	hbs1l	94	67.103	ENSTBEG00000009950	HBS1L	99	67.103	Tupaia_belangeri
ENSCSEG00000002794	hbs1l	94	71.813	ENSTTRG00000003715	HBS1L	99	71.610	Tursiops_truncatus
ENSCSEG00000002794	hbs1l	94	72.843	ENSUAMG00000001064	HBS1L	99	72.779	Ursus_americanus
ENSCSEG00000002794	hbs1l	94	72.702	ENSUMAG00000024395	HBS1L	99	86.486	Ursus_maritimus
ENSCSEG00000002794	hbs1l	84	85.000	ENSVPAG00000006280	HBS1L	84	85.000	Vicugna_pacos
ENSCSEG00000002794	hbs1l	94	72.057	ENSVVUG00000000295	HBS1L	99	71.469	Vulpes_vulpes
ENSCSEG00000002794	hbs1l	94	71.977	ENSXETG00000003726	hbs1l	99	71.977	Xenopus_tropicalis
ENSCSEG00000002794	hbs1l	94	83.618	ENSXCOG00000005323	hbs1l	100	84.188	Xiphophorus_couchianus
ENSCSEG00000002794	hbs1l	94	85.491	ENSXMAG00000004359	hbs1l	99	85.917	Xiphophorus_maculatus