EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002813 (Gene tree)
Gene ID: 103391562
Gene Symbol: dbr1
Alias: wu:fc08f08|zgc:63930
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 13709 bases
Position: chr16:1459568-1473276
Accession: 103391562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004328	DBR1	PF05011.13	1.2e-32	1	1
ENSCSEP00000004329	DBR1	PF05011.13	1.2e-32	1	1
ENSCSEP00000004333	DBR1	PF05011.13	1.2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004383	-	1855	-	ENSCSEP00000004328	562 (aa)	XP_024919365	UPI000495E266
ENSCSET00000004388	-	4917	-	ENSCSEP00000004333	562 (aa)	XP_024919365	UPI000495E266
ENSCSET00000004384	-	1789	XM_008327856	ENSCSEP00000004329	562 (aa)	XP_008326078	UPI000495E266

Gene Model

Click here to download ENSCSEG00000002813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002813	dbr1	98	54.676	ENSG00000138231	DBR1	94	77.477	Homo_sapiens
ENSCSEG00000002813	dbr1	99	74.735	ENSAPOG00000004318	dbr1	99	74.735	Acanthochromis_polyacanthus
ENSCSEG00000002813	dbr1	98	54.513	ENSAMEG00000006272	DBR1	99	53.119	Ailuropoda_melanoleuca
ENSCSEG00000002813	dbr1	100	76.182	ENSACIG00000020512	dbr1	100	76.408	Amphilophus_citrinellus
ENSCSEG00000002813	dbr1	99	75.442	ENSAOCG00000008060	dbr1	99	75.972	Amphiprion_ocellaris
ENSCSEG00000002813	dbr1	99	75.795	ENSAPEG00000021944	dbr1	99	76.325	Amphiprion_percula
ENSCSEG00000002813	dbr1	99	77.818	ENSATEG00000019673	dbr1	99	78.253	Anabas_testudineus
ENSCSEG00000002813	dbr1	99	56.150	ENSACAG00000016760	DBR1	99	55.080	Anolis_carolinensis
ENSCSEG00000002813	dbr1	98	55.072	ENSANAG00000028952	DBR1	99	77.301	Aotus_nancymaae
ENSCSEG00000002813	dbr1	99	77.345	ENSACLG00000024027	dbr1	100	76.991	Astatotilapia_calliptera
ENSCSEG00000002813	dbr1	99	66.034	ENSAMXG00000030736	dbr1	99	65.862	Astyanax_mexicanus
ENSCSEG00000002813	dbr1	99	54.804	ENSBTAG00000019949	DBR1	99	54.270	Bos_taurus
ENSCSEG00000002813	dbr1	67	45.038	WBGene00000937	dbr-1	78	45.038	Caenorhabditis_elegans
ENSCSEG00000002813	dbr1	98	54.414	ENSCJAG00000002433	DBR1	99	53.427	Callithrix_jacchus
ENSCSEG00000002813	dbr1	78	62.557	ENSCAFG00000007501	DBR1	99	54.386	Canis_familiaris
ENSCSEG00000002813	dbr1	78	62.557	ENSCAFG00020008060	DBR1	99	54.386	Canis_lupus_dingo
ENSCSEG00000002813	dbr1	99	55.062	ENSCHIG00000026937	DBR1	99	53.873	Capra_hircus
ENSCSEG00000002813	dbr1	99	53.628	ENSTSYG00000005317	DBR1	99	52.632	Carlito_syrichta
ENSCSEG00000002813	dbr1	98	52.509	ENSCPOG00000006179	DBR1	99	52.743	Cavia_porcellus
ENSCSEG00000002813	dbr1	98	54.955	ENSCCAG00000025708	DBR1	99	54.064	Cebus_capucinus
ENSCSEG00000002813	dbr1	78	62.471	ENSCATG00000032054	DBR1	99	53.833	Cercocebus_atys
ENSCSEG00000002813	dbr1	98	55.357	ENSCLAG00000001800	DBR1	99	55.203	Chinchilla_lanigera
ENSCSEG00000002813	dbr1	78	62.243	ENSCSAG00000010977	DBR1	99	53.659	Chlorocebus_sabaeus
ENSCSEG00000002813	dbr1	89	64.706	ENSCHOG00000000730	DBR1	89	64.706	Choloepus_hoffmanni
ENSCSEG00000002813	dbr1	99	55.179	ENSCPBG00000007633	DBR1	90	53.779	Chrysemys_picta_bellii
ENSCSEG00000002813	dbr1	79	52.328	ENSCING00000011388	-	98	52.477	Ciona_intestinalis
ENSCSEG00000002813	dbr1	67	56.614	ENSCSAVG00000007545	-	100	56.614	Ciona_savignyi
ENSCSEG00000002813	dbr1	99	54.787	ENSCANG00000024237	DBR1	99	53.833	Colobus_angolensis_palliatus
ENSCSEG00000002813	dbr1	99	54.291	ENSCGRG00001018497	Dbr1	99	54.196	Cricetulus_griseus_chok1gshd
ENSCSEG00000002813	dbr1	99	49.738	ENSCGRG00000005958	Dbr1	100	49.652	Cricetulus_griseus_crigri
ENSCSEG00000002813	dbr1	99	72.242	ENSCVAG00000019969	dbr1	100	72.420	Cyprinodon_variegatus
ENSCSEG00000002813	dbr1	99	65.458	ENSDARG00000056923	dbr1	99	65.685	Danio_rerio
ENSCSEG00000002813	dbr1	98	55.396	ENSDNOG00000043630	DBR1	99	55.221	Dasypus_novemcinctus
ENSCSEG00000002813	dbr1	67	53.081	FBgn0035838	ldbr	78	53.191	Drosophila_melanogaster
ENSCSEG00000002813	dbr1	58	78.358	ENSETEG00000011830	DBR1	59	78.358	Echinops_telfairi
ENSCSEG00000002813	dbr1	67	55.928	ENSEBUG00000007494	dbr1	69	55.584	Eptatretus_burgeri
ENSCSEG00000002813	dbr1	98	53.971	ENSEASG00005003788	DBR1	99	53.097	Equus_asinus_asinus
ENSCSEG00000002813	dbr1	98	54.152	ENSECAG00000013920	DBR1	99	53.628	Equus_caballus
ENSCSEG00000002813	dbr1	99	46.397	ENSEEUG00000007059	DBR1	99	46.235	Erinaceus_europaeus
ENSCSEG00000002813	dbr1	99	67.951	ENSELUG00000005587	dbr1	99	67.601	Esox_lucius
ENSCSEG00000002813	dbr1	98	54.069	ENSFCAG00000002229	DBR1	99	53.723	Felis_catus
ENSCSEG00000002813	dbr1	99	56.584	ENSFALG00000013467	DBR1	85	56.050	Ficedula_albicollis
ENSCSEG00000002813	dbr1	98	55.117	ENSFDAG00000009524	DBR1	99	54.754	Fukomys_damarensis
ENSCSEG00000002813	dbr1	99	73.797	ENSFHEG00000001743	dbr1	99	73.797	Fundulus_heteroclitus
ENSCSEG00000002813	dbr1	99	71.504	ENSGMOG00000006925	dbr1	100	70.973	Gadus_morhua
ENSCSEG00000002813	dbr1	99	50.890	ENSGALG00000043797	DBR1	99	50.088	Gallus_gallus
ENSCSEG00000002813	dbr1	99	74.014	ENSGAFG00000001046	dbr1	99	73.477	Gambusia_affinis
ENSCSEG00000002813	dbr1	99	73.675	ENSGACG00000009122	dbr1	100	73.380	Gasterosteus_aculeatus
ENSCSEG00000002813	dbr1	99	54.643	ENSGAGG00000001244	DBR1	100	53.571	Gopherus_agassizii
ENSCSEG00000002813	dbr1	98	50.899	ENSGGOG00000004564	DBR1	99	49.215	Gorilla_gorilla
ENSCSEG00000002813	dbr1	99	77.522	ENSHBUG00000000882	dbr1	100	77.168	Haplochromis_burtoni
ENSCSEG00000002813	dbr1	98	54.250	ENSHGLG00000014529	Dbr1	99	53.737	Heterocephalus_glaber_female
ENSCSEG00000002813	dbr1	98	54.250	ENSHGLG00100013202	Dbr1	99	53.737	Heterocephalus_glaber_male
ENSCSEG00000002813	dbr1	99	71.735	ENSHCOG00000004179	dbr1	99	71.377	Hippocampus_comes
ENSCSEG00000002813	dbr1	99	64.187	ENSIPUG00000023749	dbr1	99	65.398	Ictalurus_punctatus
ENSCSEG00000002813	dbr1	98	55.655	ENSSTOG00000007122	DBR1	99	53.968	Ictidomys_tridecemlineatus
ENSCSEG00000002813	dbr1	99	54.610	ENSJJAG00000017080	Dbr1	99	54.610	Jaculus_jaculus
ENSCSEG00000002813	dbr1	99	72.035	ENSKMAG00000004869	dbr1	100	73.712	Kryptolebias_marmoratus
ENSCSEG00000002813	dbr1	100	76.140	ENSLBEG00000021307	dbr1	100	76.316	Labrus_bergylta
ENSCSEG00000002813	dbr1	99	58.970	ENSLACG00000005547	DBR1	100	58.970	Latimeria_chalumnae
ENSCSEG00000002813	dbr1	99	65.125	ENSLOCG00000004160	dbr1	99	65.256	Lepisosteus_oculatus
ENSCSEG00000002813	dbr1	99	53.929	ENSLAFG00000005827	DBR1	99	52.273	Loxodonta_africana
ENSCSEG00000002813	dbr1	78	62.471	ENSMFAG00000043642	DBR1	99	53.616	Macaca_fascicularis
ENSCSEG00000002813	dbr1	78	62.471	ENSMMUG00000021284	DBR1	99	53.616	Macaca_mulatta
ENSCSEG00000002813	dbr1	78	62.471	ENSMNEG00000041740	DBR1	99	53.616	Macaca_nemestrina
ENSCSEG00000002813	dbr1	72	49.502	ENSMLEG00000034542	DBR1	95	44.660	Mandrillus_leucophaeus
ENSCSEG00000002813	dbr1	100	77.544	ENSMAMG00000012205	dbr1	100	77.544	Mastacembelus_armatus
ENSCSEG00000002813	dbr1	99	77.345	ENSMZEG00005021338	dbr1	100	76.991	Maylandia_zebra
ENSCSEG00000002813	dbr1	80	52.308	ENSMGAG00000002142	DBR1	99	51.209	Meleagris_gallopavo
ENSCSEG00000002813	dbr1	99	54.270	ENSMAUG00000010037	Dbr1	99	53.381	Mesocricetus_auratus
ENSCSEG00000002813	dbr1	98	54.367	ENSMICG00000049533	DBR1	99	53.752	Microcebus_murinus
ENSCSEG00000002813	dbr1	99	54.610	ENSMOCG00000018746	Dbr1	100	54.965	Microtus_ochrogaster
ENSCSEG00000002813	dbr1	99	74.468	ENSMMOG00000000719	dbr1	99	74.867	Mola_mola
ENSCSEG00000002813	dbr1	99	55.018	ENSMODG00000018554	DBR1	99	54.321	Monodelphis_domestica
ENSCSEG00000002813	dbr1	99	74.692	ENSMALG00000022283	dbr1	97	74.517	Monopterus_albus
ENSCSEG00000002813	dbr1	98	53.929	MGP_CAROLIEiJ_G0032564	Dbr1	98	77.301	Mus_caroli
ENSCSEG00000002813	dbr1	99	53.901	ENSMUSG00000032469	Dbr1	98	77.301	Mus_musculus
ENSCSEG00000002813	dbr1	99	54.064	MGP_PahariEiJ_G0015433	Dbr1	98	77.301	Mus_pahari
ENSCSEG00000002813	dbr1	99	54.174	MGP_SPRETEiJ_G0033708	Dbr1	98	77.301	Mus_spretus
ENSCSEG00000002813	dbr1	98	54.107	ENSMPUG00000009230	DBR1	99	53.765	Mustela_putorius_furo
ENSCSEG00000002813	dbr1	98	53.667	ENSMLUG00000026117	DBR1	99	53.779	Myotis_lucifugus
ENSCSEG00000002813	dbr1	99	54.545	ENSNGAG00000003518	Dbr1	99	54.804	Nannospalax_galili
ENSCSEG00000002813	dbr1	99	76.909	ENSNBRG00000016318	dbr1	100	76.554	Neolamprologus_brichardi
ENSCSEG00000002813	dbr1	99	54.383	ENSNLEG00000032263	DBR1	98	52.900	Nomascus_leucogenys
ENSCSEG00000002813	dbr1	99	55.197	ENSMEUG00000009188	DBR1	100	54.122	Notamacropus_eugenii
ENSCSEG00000002813	dbr1	92	49.904	ENSOPRG00000016510	DBR1	99	48.956	Ochotona_princeps
ENSCSEG00000002813	dbr1	99	55.044	ENSODEG00000018178	DBR1	99	54.211	Octodon_degus
ENSCSEG00000002813	dbr1	99	75.044	ENSONIG00000013801	dbr1	100	75.972	Oreochromis_niloticus
ENSCSEG00000002813	dbr1	88	55.020	ENSOANG00000007783	DBR1	99	54.618	Ornithorhynchus_anatinus
ENSCSEG00000002813	dbr1	72	62.162	ENSOCUG00000015129	DBR1	89	53.309	Oryctolagus_cuniculus
ENSCSEG00000002813	dbr1	99	71.250	ENSORLG00015001112	dbr1	99	70.285	Oryzias_latipes_hsok
ENSCSEG00000002813	dbr1	99	69.821	ENSOMEG00000000857	dbr1	99	68.683	Oryzias_melastigma
ENSCSEG00000002813	dbr1	98	54.204	ENSOGAG00000033095	DBR1	99	53.659	Otolemur_garnettii
ENSCSEG00000002813	dbr1	99	53.996	ENSOARG00000007589	DBR1	99	52.817	Ovis_aries
ENSCSEG00000002813	dbr1	98	54.676	ENSPPAG00000031137	DBR1	99	53.927	Pan_paniscus
ENSCSEG00000002813	dbr1	98	54.069	ENSPPRG00000013629	DBR1	99	53.723	Panthera_pardus
ENSCSEG00000002813	dbr1	96	53.420	ENSPTIG00000012674	DBR1	97	53.080	Panthera_tigris_altaica
ENSCSEG00000002813	dbr1	98	54.856	ENSPTRG00000015441	DBR1	99	54.101	Pan_troglodytes
ENSCSEG00000002813	dbr1	78	62.471	ENSPANG00000012664	DBR1	99	54.386	Papio_anubis
ENSCSEG00000002813	dbr1	99	65.913	ENSPKIG00000000310	dbr1	100	65.391	Paramormyrops_kingsleyae
ENSCSEG00000002813	dbr1	88	53.094	ENSPSIG00000015486	DBR1	99	52.695	Pelodiscus_sinensis
ENSCSEG00000002813	dbr1	98	53.819	ENSPEMG00000020602	Dbr1	98	54.386	Peromyscus_maniculatus_bairdii
ENSCSEG00000002813	dbr1	67	57.672	ENSPMAG00000008620	dbr1	99	57.672	Petromyzon_marinus
ENSCSEG00000002813	dbr1	99	55.893	ENSPCIG00000006494	DBR1	99	54.833	Phascolarctos_cinereus
ENSCSEG00000002813	dbr1	70	68.448	ENSPLAG00000002421	-	99	68.193	Poecilia_latipinna
ENSCSEG00000002813	dbr1	99	74.194	ENSPLAG00000011665	dbr1	99	74.014	Poecilia_latipinna
ENSCSEG00000002813	dbr1	71	67.003	ENSPMEG00000020884	-	94	68.262	Poecilia_mexicana
ENSCSEG00000002813	dbr1	99	73.297	ENSPMEG00000010080	dbr1	99	74.194	Poecilia_mexicana
ENSCSEG00000002813	dbr1	99	73.835	ENSPREG00000020157	dbr1	99	74.731	Poecilia_reticulata
ENSCSEG00000002813	dbr1	99	54.741	ENSPPYG00000014139	DBR1	99	53.646	Pongo_abelii
ENSCSEG00000002813	dbr1	67	65.172	ENSPCAG00000012956	DBR1	97	65.172	Procavia_capensis
ENSCSEG00000002813	dbr1	78	62.243	ENSPCOG00000016894	DBR1	99	52.910	Propithecus_coquereli
ENSCSEG00000002813	dbr1	98	47.473	ENSPVAG00000007713	DBR1	99	47.163	Pteropus_vampyrus
ENSCSEG00000002813	dbr1	99	77.208	ENSPNYG00000015453	dbr1	100	76.855	Pundamilia_nyererei
ENSCSEG00000002813	dbr1	99	65.331	ENSPNAG00000025595	dbr1	99	67.016	Pygocentrus_nattereri
ENSCSEG00000002813	dbr1	99	52.837	ENSRNOG00000014588	Dbr1	99	53.393	Rattus_norvegicus
ENSCSEG00000002813	dbr1	78	62.243	ENSRBIG00000045002	DBR1	99	53.415	Rhinopithecus_bieti
ENSCSEG00000002813	dbr1	98	54.189	ENSRROG00000044819	DBR1	99	53.357	Rhinopithecus_roxellana
ENSCSEG00000002813	dbr1	52	37.216	YKL149C	DBR1	86	37.500	Saccharomyces_cerevisiae
ENSCSEG00000002813	dbr1	98	54.775	ENSSBOG00000032048	DBR1	99	53.792	Saimiri_boliviensis_boliviensis
ENSCSEG00000002813	dbr1	99	55.674	ENSSHAG00000006752	DBR1	99	55.456	Sarcophilus_harrisii
ENSCSEG00000002813	dbr1	99	64.516	ENSSFOG00015011410	dbr1	99	64.337	Scleropages_formosus
ENSCSEG00000002813	dbr1	99	74.735	ENSSMAG00000016078	dbr1	99	76.325	Scophthalmus_maximus
ENSCSEG00000002813	dbr1	99	78.284	ENSSDUG00000017849	dbr1	99	78.131	Seriola_dumerili
ENSCSEG00000002813	dbr1	99	77.680	ENSSLDG00000019891	dbr1	99	77.758	Seriola_lalandi_dorsalis
ENSCSEG00000002813	dbr1	99	49.911	ENSSARG00000009558	-	99	49.293	Sorex_araneus
ENSCSEG00000002813	dbr1	53	71.622	ENSSARG00000003148	-	74	71.622	Sorex_araneus
ENSCSEG00000002813	dbr1	89	53.373	ENSSPUG00000004724	DBR1	93	52.976	Sphenodon_punctatus
ENSCSEG00000002813	dbr1	99	78.230	ENSSPAG00000016892	dbr1	99	77.522	Stegastes_partitus
ENSCSEG00000002813	dbr1	99	55.080	ENSSSCG00000031098	DBR1	99	53.641	Sus_scrofa
ENSCSEG00000002813	dbr1	95	55.844	ENSTGUG00000007073	DBR1	98	54.731	Taeniopygia_guttata
ENSCSEG00000002813	dbr1	99	71.786	ENSTRUG00000021594	dbr1	98	71.658	Takifugu_rubripes
ENSCSEG00000002813	dbr1	99	70.285	ENSTNIG00000006710	dbr1	99	70.463	Tetraodon_nigroviridis
ENSCSEG00000002813	dbr1	99	55.258	ENSTTRG00000004020	DBR1	99	53.779	Tursiops_truncatus
ENSCSEG00000002813	dbr1	99	54.610	ENSUAMG00000004639	DBR1	99	54.255	Ursus_americanus
ENSCSEG00000002813	dbr1	98	54.758	ENSUMAG00000015012	DBR1	99	53.369	Ursus_maritimus
ENSCSEG00000002813	dbr1	99	50.267	ENSVPAG00000011711	DBR1	99	50.446	Vicugna_pacos
ENSCSEG00000002813	dbr1	78	62.329	ENSVVUG00000026604	DBR1	99	54.211	Vulpes_vulpes
ENSCSEG00000002813	dbr1	99	59.788	ENSXETG00000027491	dbr1	100	58.275	Xenopus_tropicalis
ENSCSEG00000002813	dbr1	99	74.552	ENSXCOG00000018078	dbr1	99	73.835	Xiphophorus_couchianus
ENSCSEG00000002813	dbr1	99	74.014	ENSXMAG00000007311	dbr1	99	73.835	Xiphophorus_maculatus