EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002894 (Gene tree)
Gene ID: 103382187
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3574 bases
Position: chr8:15108125-15111698
Accession: 103382187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004451	KH_1	PF00013.29	6.5e-14	1	1
ENSCSEP00000004456	KH_1	PF00013.29	7.7e-14	1	1
ENSCSEP00000004451	TUDOR	PF00567.24	3.9e-27	1	1
ENSCSEP00000004456	TUDOR	PF00567.24	4.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004512	-	1717	-	ENSCSEP00000004456	566 (aa)	-	-
ENSCSET00000004507	-	1704	XM_008314881	ENSCSEP00000004451	554 (aa)	XP_008313103	UPI000496C7B8

Gene Model

Click here to download ENSCSEG00000002894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002894's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002894	tdrkh	100	69.435	ENSAPOG00000012653	tdrkh	100	69.643	Acanthochromis_polyacanthus
ENSCSEG00000002894	tdrkh	96	65.926	ENSACIG00000010318	tdrkh	99	65.930	Amphilophus_citrinellus
ENSCSEG00000002894	tdrkh	99	70.357	ENSAOCG00000020623	tdrkh	100	70.357	Amphiprion_ocellaris
ENSCSEG00000002894	tdrkh	99	70.000	ENSAPEG00000018388	tdrkh	100	70.000	Amphiprion_percula
ENSCSEG00000002894	tdrkh	100	68.021	ENSATEG00000023809	tdrkh	100	68.214	Anabas_testudineus
ENSCSEG00000002894	tdrkh	99	66.667	ENSACLG00000003017	tdrkh	100	66.667	Astatotilapia_calliptera
ENSCSEG00000002894	tdrkh	99	59.469	ENSAMXG00000011664	tdrkh	95	57.686	Astyanax_mexicanus
ENSCSEG00000002894	tdrkh	60	71.220	ENSCVAG00000020347	tdrkh	77	71.220	Cyprinodon_variegatus
ENSCSEG00000002894	tdrkh	99	58.230	ENSDARG00000053474	tdrkh	100	53.953	Danio_rerio
ENSCSEG00000002894	tdrkh	100	59.450	ENSELUG00000024537	tdrkh	95	59.278	Esox_lucius
ENSCSEG00000002894	tdrkh	99	64.516	ENSFHEG00000003544	tdrkh	100	64.516	Fundulus_heteroclitus
ENSCSEG00000002894	tdrkh	99	61.250	ENSGMOG00000009304	tdrkh	94	60.286	Gadus_morhua
ENSCSEG00000002894	tdrkh	99	63.914	ENSGAFG00000010754	tdrkh	100	63.555	Gambusia_affinis
ENSCSEG00000002894	tdrkh	100	66.607	ENSGACG00000015258	tdrkh	95	65.432	Gasterosteus_aculeatus
ENSCSEG00000002894	tdrkh	99	66.429	ENSHBUG00000017609	tdrkh	100	66.429	Haplochromis_burtoni
ENSCSEG00000002894	tdrkh	99	57.821	ENSIPUG00000009673	tdrkh	99	57.821	Ictalurus_punctatus
ENSCSEG00000002894	tdrkh	99	66.427	ENSKMAG00000016638	tdrkh	94	66.248	Kryptolebias_marmoratus
ENSCSEG00000002894	tdrkh	100	68.739	ENSLBEG00000027323	tdrkh	98	68.739	Labrus_bergylta
ENSCSEG00000002894	tdrkh	97	50.912	ENSLOCG00000011381	tdrkh	97	49.909	Lepisosteus_oculatus
ENSCSEG00000002894	tdrkh	99	68.165	ENSMAMG00000020343	tdrkh	100	68.165	Mastacembelus_armatus
ENSCSEG00000002894	tdrkh	99	66.667	ENSMZEG00005006755	tdrkh	100	66.667	Maylandia_zebra
ENSCSEG00000002894	tdrkh	97	65.683	ENSMMOG00000020663	tdrkh	91	65.809	Mola_mola
ENSCSEG00000002894	tdrkh	99	67.143	ENSMALG00000015401	tdrkh	100	67.143	Monopterus_albus
ENSCSEG00000002894	tdrkh	99	63.214	ENSNBRG00000023815	tdrkh	100	63.036	Neolamprologus_brichardi
ENSCSEG00000002894	tdrkh	99	64.748	ENSORLG00000029204	tdrkh	99	63.799	Oryzias_latipes
ENSCSEG00000002894	tdrkh	95	63.227	ENSORLG00020016168	tdrkh	99	61.481	Oryzias_latipes_hni
ENSCSEG00000002894	tdrkh	96	63.755	ENSORLG00015014094	tdrkh	97	62.157	Oryzias_latipes_hsok
ENSCSEG00000002894	tdrkh	99	65.468	ENSOMEG00000015063	tdrkh	92	65.468	Oryzias_melastigma
ENSCSEG00000002894	tdrkh	97	56.475	ENSPKIG00000017597	tdrkh	98	54.724	Paramormyrops_kingsleyae
ENSCSEG00000002894	tdrkh	98	61.538	ENSPMGG00000019362	tdrkh	99	61.896	Periophthalmus_magnuspinnatus
ENSCSEG00000002894	tdrkh	100	64.057	ENSPFOG00000013032	tdrkh	95	63.879	Poecilia_formosa
ENSCSEG00000002894	tdrkh	99	64.568	ENSPLAG00000004193	tdrkh	100	64.388	Poecilia_latipinna
ENSCSEG00000002894	tdrkh	99	64.388	ENSPMEG00000016502	tdrkh	100	64.209	Poecilia_mexicana
ENSCSEG00000002894	tdrkh	100	62.321	ENSPREG00000004213	tdrkh	96	62.143	Poecilia_reticulata
ENSCSEG00000002894	tdrkh	96	66.298	ENSPNYG00000022818	tdrkh	97	66.484	Pundamilia_nyererei
ENSCSEG00000002894	tdrkh	99	56.514	ENSPNAG00000008783	tdrkh	95	56.514	Pygocentrus_nattereri
ENSCSEG00000002894	tdrkh	97	56.044	ENSSFOG00015001048	tdrkh	98	54.937	Scleropages_formosus
ENSCSEG00000002894	tdrkh	99	71.171	ENSSMAG00000001532	tdrkh	100	70.811	Scophthalmus_maximus
ENSCSEG00000002894	tdrkh	99	70.141	ENSSDUG00000013393	tdrkh	100	70.318	Seriola_dumerili
ENSCSEG00000002894	tdrkh	99	69.808	ENSSLDG00000017418	tdrkh	100	68.706	Seriola_lalandi_dorsalis
ENSCSEG00000002894	tdrkh	100	70.495	ENSSPAG00000006435	tdrkh	96	70.495	Stegastes_partitus
ENSCSEG00000002894	tdrkh	96	64.432	ENSTRUG00000006644	tdrkh	97	64.246	Takifugu_rubripes
ENSCSEG00000002894	tdrkh	99	62.791	ENSTNIG00000003157	tdrkh	99	62.791	Tetraodon_nigroviridis
ENSCSEG00000002894	tdrkh	88	69.863	ENSXCOG00000016972	tdrkh	98	72.222	Xiphophorus_couchianus
ENSCSEG00000002894	tdrkh	99	62.050	ENSXMAG00000014756	tdrkh	100	62.050	Xiphophorus_maculatus