EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002946 (Gene tree)
Gene ID: 103387800
Gene Symbol: pop4
Alias: zgc:110597
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3155 bases
Position: chr1:26435685-26438839
Accession: 103387800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004534	UPF0086	PF01868.16	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004590	-	666	XM_008322576	ENSCSEP00000004534	221 (aa)	XP_008320798	-

Gene Model

Click here to download ENSCSEG00000002946's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002946	pop4	92	53.695	ENSG00000105171	POP4	100	62.500	Homo_sapiens
ENSCSEG00000002946	pop4	94	51.923	ENSAMEG00000018329	-	94	51.923	Ailuropoda_melanoleuca
ENSCSEG00000002946	pop4	94	48.804	ENSAMEG00000003172	-	94	46.977	Ailuropoda_melanoleuca
ENSCSEG00000002946	pop4	100	70.136	ENSACIG00000008358	pop4	100	70.588	Amphilophus_citrinellus
ENSCSEG00000002946	pop4	90	72.637	ENSAOCG00000010116	pop4	98	72.637	Amphiprion_ocellaris
ENSCSEG00000002946	pop4	99	71.689	ENSAPEG00000002829	pop4	92	71.689	Amphiprion_percula
ENSCSEG00000002946	pop4	99	74.545	ENSATEG00000013028	pop4	99	73.182	Anabas_testudineus
ENSCSEG00000002946	pop4	92	53.695	ENSAPLG00000014051	POP4	98	53.695	Anas_platyrhynchos
ENSCSEG00000002946	pop4	94	52.885	ENSANAG00000020295	POP4	94	53.589	Aotus_nancymaae
ENSCSEG00000002946	pop4	100	69.683	ENSACLG00000000526	pop4	99	69.863	Astatotilapia_calliptera
ENSCSEG00000002946	pop4	97	59.070	ENSAMXG00000002899	pop4	97	59.070	Astyanax_mexicanus
ENSCSEG00000002946	pop4	94	53.846	ENSBTAG00000002223	POP4	94	53.846	Bos_taurus
ENSCSEG00000002946	pop4	92	53.922	ENSCJAG00000046750	POP4	97	59.195	Callithrix_jacchus
ENSCSEG00000002946	pop4	78	57.803	ENSCAFG00000007630	POP4	95	58.286	Canis_familiaris
ENSCSEG00000002946	pop4	94	53.365	ENSCHIG00000016743	POP4	94	53.365	Capra_hircus
ENSCSEG00000002946	pop4	93	53.659	ENSTSYG00000003488	POP4	93	54.369	Carlito_syrichta
ENSCSEG00000002946	pop4	94	36.058	ENSCAPG00000011105	POP4	94	36.842	Cavia_aperea
ENSCSEG00000002946	pop4	94	51.442	ENSCPOG00000002992	POP4	94	52.153	Cavia_porcellus
ENSCSEG00000002946	pop4	92	52.451	ENSCCAG00000020285	-	94	52.632	Cebus_capucinus
ENSCSEG00000002946	pop4	87	49.223	ENSCCAG00000034244	-	88	48.705	Cebus_capucinus
ENSCSEG00000002946	pop4	92	55.610	ENSCATG00000036022	POP4	100	63.542	Cercocebus_atys
ENSCSEG00000002946	pop4	94	51.923	ENSCLAG00000013162	POP4	94	52.632	Chinchilla_lanigera
ENSCSEG00000002946	pop4	92	53.922	ENSCSAG00000004868	POP4	93	54.634	Chlorocebus_sabaeus
ENSCSEG00000002946	pop4	94	37.981	ENSCHOG00000002071	POP4	95	37.981	Choloepus_hoffmanni
ENSCSEG00000002946	pop4	99	52.055	ENSCPBG00000016132	POP4	99	52.055	Chrysemys_picta_bellii
ENSCSEG00000002946	pop4	55	36.585	ENSCING00000023871	-	88	33.143	Ciona_intestinalis
ENSCSEG00000002946	pop4	92	53.695	ENSCANG00000005924	POP4	100	54.412	Colobus_angolensis_palliatus
ENSCSEG00000002946	pop4	92	55.392	ENSCGRG00001017185	Pop4	92	55.122	Cricetulus_griseus_chok1gshd
ENSCSEG00000002946	pop4	92	55.392	ENSCGRG00000008155	Pop4	92	55.122	Cricetulus_griseus_crigri
ENSCSEG00000002946	pop4	97	47.222	ENSCVAG00000018602	POP4	92	47.196	Cyprinodon_variegatus
ENSCSEG00000002946	pop4	99	61.927	ENSDARG00000101472	pop4	99	61.468	Danio_rerio
ENSCSEG00000002946	pop4	94	52.885	ENSDNOG00000047663	POP4	83	53.589	Dasypus_novemcinctus
ENSCSEG00000002946	pop4	72	49.686	ENSDORG00000008577	Pop4	92	50.625	Dipodomys_ordii
ENSCSEG00000002946	pop4	62	31.724	FBgn0035831	CG8038	70	31.724	Drosophila_melanogaster
ENSCSEG00000002946	pop4	94	43.478	ENSETEG00000003607	POP4	95	44.019	Echinops_telfairi
ENSCSEG00000002946	pop4	67	44.898	ENSEBUG00000004305	pop4	62	44.898	Eptatretus_burgeri
ENSCSEG00000002946	pop4	67	51.701	ENSEBUG00000010447	pop4	57	51.701	Eptatretus_burgeri
ENSCSEG00000002946	pop4	67	44.898	ENSEBUG00000008575	pop4	66	44.898	Eptatretus_burgeri
ENSCSEG00000002946	pop4	94	57.692	ENSECAG00000020206	POP4	77	57.692	Equus_caballus
ENSCSEG00000002946	pop4	90	39.394	ENSEEUG00000013109	POP4	99	40.201	Erinaceus_europaeus
ENSCSEG00000002946	pop4	99	59.817	ENSELUG00000019812	pop4	99	59.817	Esox_lucius
ENSCSEG00000002946	pop4	94	54.327	ENSFCAG00000001619	POP4	94	54.327	Felis_catus
ENSCSEG00000002946	pop4	98	52.995	ENSFALG00000000206	POP4	96	52.995	Ficedula_albicollis
ENSCSEG00000002946	pop4	94	51.442	ENSFDAG00000017859	POP4	94	52.153	Fukomys_damarensis
ENSCSEG00000002946	pop4	96	59.813	ENSFHEG00000012745	pop4	96	58.411	Fundulus_heteroclitus
ENSCSEG00000002946	pop4	90	58.416	ENSGMOG00000000335	pop4	99	57.426	Gadus_morhua
ENSCSEG00000002946	pop4	99	52.055	ENSGALG00000041972	POP4	92	52.055	Gallus_gallus
ENSCSEG00000002946	pop4	77	63.953	ENSGAFG00000003571	pop4	95	63.372	Gambusia_affinis
ENSCSEG00000002946	pop4	99	67.727	ENSGACG00000014510	pop4	100	69.022	Gasterosteus_aculeatus
ENSCSEG00000002946	pop4	99	51.835	ENSGAGG00000024544	POP4	77	52.558	Gopherus_agassizii
ENSCSEG00000002946	pop4	92	53.431	ENSGGOG00000038346	POP4	92	54.146	Gorilla_gorilla
ENSCSEG00000002946	pop4	99	68.950	ENSHBUG00000021821	pop4	99	68.950	Haplochromis_burtoni
ENSCSEG00000002946	pop4	94	51.923	ENSHGLG00000015798	POP4	94	52.632	Heterocephalus_glaber_female
ENSCSEG00000002946	pop4	94	51.923	ENSHGLG00100009737	POP4	94	52.632	Heterocephalus_glaber_male
ENSCSEG00000002946	pop4	99	63.014	ENSHCOG00000020937	pop4	99	63.014	Hippocampus_comes
ENSCSEG00000002946	pop4	97	55.814	ENSIPUG00000013652	pop4	97	55.349	Ictalurus_punctatus
ENSCSEG00000002946	pop4	94	54.808	ENSSTOG00000011016	POP4	94	55.502	Ictidomys_tridecemlineatus
ENSCSEG00000002946	pop4	92	52.941	ENSJJAG00000013376	Pop4	92	53.659	Jaculus_jaculus
ENSCSEG00000002946	pop4	97	75.814	ENSKMAG00000012250	pop4	96	75.814	Kryptolebias_marmoratus
ENSCSEG00000002946	pop4	99	65.000	ENSLBEG00000018846	-	99	64.091	Labrus_bergylta
ENSCSEG00000002946	pop4	99	65.000	ENSLBEG00000014139	pop4	99	64.091	Labrus_bergylta
ENSCSEG00000002946	pop4	97	51.628	ENSLACG00000008581	POP4	96	51.628	Latimeria_chalumnae
ENSCSEG00000002946	pop4	99	55.505	ENSLOCG00000005597	pop4	99	55.505	Lepisosteus_oculatus
ENSCSEG00000002946	pop4	94	53.846	ENSLAFG00000000084	POP4	94	54.545	Loxodonta_africana
ENSCSEG00000002946	pop4	92	53.922	ENSMFAG00000029606	POP4	92	54.634	Macaca_fascicularis
ENSCSEG00000002946	pop4	92	55.392	ENSMMUG00000017424	POP4	92	55.392	Macaca_mulatta
ENSCSEG00000002946	pop4	92	55.392	ENSMNEG00000031374	POP4	92	55.392	Macaca_nemestrina
ENSCSEG00000002946	pop4	92	54.187	ENSMLEG00000043454	POP4	92	54.634	Mandrillus_leucophaeus
ENSCSEG00000002946	pop4	100	72.072	ENSMAMG00000011716	pop4	99	71.622	Mastacembelus_armatus
ENSCSEG00000002946	pop4	99	69.863	ENSMZEG00005002360	pop4	99	69.863	Maylandia_zebra
ENSCSEG00000002946	pop4	100	50.679	ENSMGAG00000005337	POP4	98	51.131	Meleagris_gallopavo
ENSCSEG00000002946	pop4	92	53.431	ENSMAUG00000020110	Pop4	92	54.146	Mesocricetus_auratus
ENSCSEG00000002946	pop4	94	51.442	ENSMICG00000035730	POP4	93	51.675	Microcebus_murinus
ENSCSEG00000002946	pop4	100	67.873	ENSMMOG00000015321	pop4	99	66.968	Mola_mola
ENSCSEG00000002946	pop4	94	54.327	ENSMODG00000029406	POP4	90	54.808	Monodelphis_domestica
ENSCSEG00000002946	pop4	99	74.429	ENSMALG00000012571	pop4	99	73.973	Monopterus_albus
ENSCSEG00000002946	pop4	92	55.392	MGP_CAROLIEiJ_G0029600	Pop4	92	55.392	Mus_caroli
ENSCSEG00000002946	pop4	92	54.412	ENSMUSG00000030423	Pop4	92	54.412	Mus_musculus
ENSCSEG00000002946	pop4	92	54.412	MGP_SPRETEiJ_G0030699	Pop4	92	55.122	Mus_spretus
ENSCSEG00000002946	pop4	91	47.525	ENSMPUG00000008063	-	91	47.525	Mustela_putorius_furo
ENSCSEG00000002946	pop4	94	52.885	ENSMPUG00000008041	-	94	52.885	Mustela_putorius_furo
ENSCSEG00000002946	pop4	94	43.062	ENSMLUG00000010774	POP4	94	43.810	Myotis_lucifugus
ENSCSEG00000002946	pop4	57	58.400	ENSMEUG00000003636	-	100	58.400	Notamacropus_eugenii
ENSCSEG00000002946	pop4	90	55.276	ENSOPRG00000004736	POP4	99	56.000	Ochotona_princeps
ENSCSEG00000002946	pop4	94	51.923	ENSODEG00000013025	POP4	98	52.153	Octodon_degus
ENSCSEG00000002946	pop4	100	69.683	ENSONIG00000003458	pop4	98	69.683	Oreochromis_niloticus
ENSCSEG00000002946	pop4	92	54.412	ENSOCUG00000015974	POP4	92	55.122	Oryctolagus_cuniculus
ENSCSEG00000002946	pop4	100	63.514	ENSORLG00000020317	pop4	99	63.514	Oryzias_latipes
ENSCSEG00000002946	pop4	99	64.091	ENSORLG00015011624	pop4	99	64.091	Oryzias_latipes_hsok
ENSCSEG00000002946	pop4	99	64.840	ENSOMEG00000002538	pop4	98	64.840	Oryzias_melastigma
ENSCSEG00000002946	pop4	94	53.365	ENSOGAG00000011168	POP4	94	54.067	Otolemur_garnettii
ENSCSEG00000002946	pop4	90	54.774	ENSOARG00000004041	POP4	90	54.774	Ovis_aries
ENSCSEG00000002946	pop4	92	53.431	ENSPPAG00000040372	POP4	92	54.146	Pan_paniscus
ENSCSEG00000002946	pop4	94	54.327	ENSPPRG00000010502	POP4	94	54.327	Panthera_pardus
ENSCSEG00000002946	pop4	94	54.327	ENSPTIG00000016598	POP4	94	54.327	Panthera_tigris_altaica
ENSCSEG00000002946	pop4	92	53.431	ENSPTRG00000010779	POP4	92	54.146	Pan_troglodytes
ENSCSEG00000002946	pop4	92	53.922	ENSPANG00000008546	POP4	92	54.634	Papio_anubis
ENSCSEG00000002946	pop4	91	58.128	ENSPKIG00000004468	pop4	89	58.128	Paramormyrops_kingsleyae
ENSCSEG00000002946	pop4	99	52.511	ENSPSIG00000015690	POP4	100	55.172	Pelodiscus_sinensis
ENSCSEG00000002946	pop4	92	59.135	ENSPMGG00000008608	pop4	99	59.615	Periophthalmus_magnuspinnatus
ENSCSEG00000002946	pop4	92	46.078	ENSPEMG00000019982	-	92	45.894	Peromyscus_maniculatus_bairdii
ENSCSEG00000002946	pop4	95	52.632	ENSPEMG00000014034	-	96	53.333	Peromyscus_maniculatus_bairdii
ENSCSEG00000002946	pop4	66	57.931	ENSPMAG00000006265	pop4	73	57.931	Petromyzon_marinus
ENSCSEG00000002946	pop4	94	54.327	ENSPCIG00000024738	POP4	90	53.846	Phascolarctos_cinereus
ENSCSEG00000002946	pop4	97	65.581	ENSPFOG00000000925	pop4	97	65.581	Poecilia_formosa
ENSCSEG00000002946	pop4	97	65.581	ENSPLAG00000003161	pop4	97	65.581	Poecilia_latipinna
ENSCSEG00000002946	pop4	97	65.581	ENSPMEG00000002475	pop4	97	65.581	Poecilia_mexicana
ENSCSEG00000002946	pop4	100	63.348	ENSPREG00000022403	pop4	94	63.348	Poecilia_reticulata
ENSCSEG00000002946	pop4	92	53.922	ENSPPYG00000009805	POP4	92	54.634	Pongo_abelii
ENSCSEG00000002946	pop4	92	52.217	ENSPCAG00000007737	POP4	94	51.442	Procavia_capensis
ENSCSEG00000002946	pop4	94	51.923	ENSPCOG00000018055	POP4	94	52.632	Propithecus_coquereli
ENSCSEG00000002946	pop4	94	54.762	ENSPVAG00000006069	POP4	94	54.762	Pteropus_vampyrus
ENSCSEG00000002946	pop4	99	69.863	ENSPNYG00000020038	pop4	99	69.863	Pundamilia_nyererei
ENSCSEG00000002946	pop4	97	57.674	ENSPNAG00000005591	pop4	97	56.744	Pygocentrus_nattereri
ENSCSEG00000002946	pop4	92	53.922	ENSRNOG00000027646	Pop4	92	53.922	Rattus_norvegicus
ENSCSEG00000002946	pop4	73	51.553	ENSRBIG00000044769	POP4	84	58.333	Rhinopithecus_bieti
ENSCSEG00000002946	pop4	92	53.922	ENSRROG00000028903	POP4	92	54.634	Rhinopithecus_roxellana
ENSCSEG00000002946	pop4	60	32.895	YBR257W	-	54	32.895	Saccharomyces_cerevisiae
ENSCSEG00000002946	pop4	94	54.067	ENSSBOG00000032445	POP4	94	53.110	Saimiri_boliviensis_boliviensis
ENSCSEG00000002946	pop4	94	53.846	ENSSHAG00000016888	POP4	94	53.365	Sarcophilus_harrisii
ENSCSEG00000002946	pop4	99	58.257	ENSSFOG00015014556	pop4	97	57.798	Scleropages_formosus
ENSCSEG00000002946	pop4	98	71.560	ENSSMAG00000016611	pop4	98	71.560	Scophthalmus_maximus
ENSCSEG00000002946	pop4	99	73.636	ENSSDUG00000019865	pop4	88	72.273	Seriola_dumerili
ENSCSEG00000002946	pop4	99	71.818	ENSSLDG00000001763	pop4	98	70.909	Seriola_lalandi_dorsalis
ENSCSEG00000002946	pop4	94	55.288	ENSSARG00000004748	POP4	95	55.981	Sorex_araneus
ENSCSEG00000002946	pop4	99	72.727	ENSSPAG00000014364	pop4	98	72.727	Stegastes_partitus
ENSCSEG00000002946	pop4	94	52.885	ENSSSCG00000002854	POP4	94	52.885	Sus_scrofa
ENSCSEG00000002946	pop4	90	54.000	ENSTGUG00000008953	POP4	99	54.000	Taeniopygia_guttata
ENSCSEG00000002946	pop4	92	69.458	ENSTNIG00000006401	pop4	100	69.458	Tetraodon_nigroviridis
ENSCSEG00000002946	pop4	94	54.106	ENSTBEG00000002194	POP4	94	53.846	Tupaia_belangeri
ENSCSEG00000002946	pop4	94	51.923	ENSTTRG00000005882	POP4	94	51.923	Tursiops_truncatus
ENSCSEG00000002946	pop4	94	51.923	ENSUAMG00000003049	-	94	51.923	Ursus_americanus
ENSCSEG00000002946	pop4	94	51.923	ENSUMAG00000007522	-	94	51.923	Ursus_maritimus
ENSCSEG00000002946	pop4	94	52.174	ENSVVUG00000016876	-	72	52.885	Vulpes_vulpes
ENSCSEG00000002946	pop4	96	49.765	ENSXETG00000017598	pop4	96	50.704	Xenopus_tropicalis
ENSCSEG00000002946	pop4	100	62.780	ENSXCOG00000017695	pop4	94	62.780	Xiphophorus_couchianus
ENSCSEG00000002946	pop4	100	62.780	ENSXMAG00000013862	pop4	94	62.780	Xiphophorus_maculatus