EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000002988 (Gene tree)
Gene ID: 103388279
Gene Symbol: setdb1b
Alias: im:7143091|wu:fa04a12|wu:fj80h02|zgc:152899
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 10689 bases
Position: chr13:5245090-5255778
Accession: 103388279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004698	MBD	PF01429.19	6.4e-11	1	1
ENSCSEP00000004719	MBD	PF01429.19	6.5e-11	1	1
ENSCSEP00000004716	MBD	PF01429.19	6.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004772	-	3474	-	ENSCSEP00000004716	1157 (aa)	-	-
ENSCSET00000004754	-	3444	-	ENSCSEP00000004698	1147 (aa)	-	-
ENSCSET00000004775	-	3456	XM_008323194	ENSCSEP00000004719	1151 (aa)	XP_008321416	-

Gene Model

Click here to download ENSCSEG00000002988's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000002988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000002988	setdb1b	98	69.189	ENSG00000143379	SETDB1	89	63.415	Homo_sapiens
ENSCSEG00000002988	setdb1b	100	77.625	ENSAPOG00000016228	setdb1b	99	77.563	Acanthochromis_polyacanthus
ENSCSEG00000002988	setdb1b	98	69.730	ENSAMEG00000001160	SETDB1	89	63.902	Ailuropoda_melanoleuca
ENSCSEG00000002988	setdb1b	100	79.831	ENSACIG00000007359	setdb1b	99	79.576	Amphilophus_citrinellus
ENSCSEG00000002988	setdb1b	100	79.810	ENSAOCG00000005586	setdb1b	100	79.313	Amphiprion_ocellaris
ENSCSEG00000002988	setdb1b	99	77.720	ENSAPEG00000007774	setdb1b	99	79.066	Amphiprion_percula
ENSCSEG00000002988	setdb1b	100	76.536	ENSATEG00000023520	setdb1b	99	76.787	Anabas_testudineus
ENSCSEG00000002988	setdb1b	98	67.760	ENSAPLG00000013908	SETDB1	90	62.255	Anas_platyrhynchos
ENSCSEG00000002988	setdb1b	99	69.189	ENSANAG00000001819	SETDB1	90	63.415	Aotus_nancymaae
ENSCSEG00000002988	setdb1b	100	76.485	ENSACLG00000020489	setdb1b	99	76.848	Astatotilapia_calliptera
ENSCSEG00000002988	setdb1b	93	73.608	ENSAMXG00000016168	setdb1b	98	72.990	Astyanax_mexicanus
ENSCSEG00000002988	setdb1b	65	46.605	ENSAMXG00000010030	setdb1a	57	58.025	Astyanax_mexicanus
ENSCSEG00000002988	setdb1b	98	71.348	ENSBTAG00000000098	SETDB1	87	70.225	Bos_taurus
ENSCSEG00000002988	setdb1b	98	69.189	ENSCJAG00000006972	SETDB1	89	63.415	Callithrix_jacchus
ENSCSEG00000002988	setdb1b	98	69.730	ENSCAFG00000023501	SETDB1	90	63.902	Canis_familiaris
ENSCSEG00000002988	setdb1b	98	69.730	ENSCAFG00020013596	SETDB1	98	57.627	Canis_lupus_dingo
ENSCSEG00000002988	setdb1b	98	69.189	ENSCHIG00000010698	SETDB1	89	63.415	Capra_hircus
ENSCSEG00000002988	setdb1b	88	55.566	ENSTSYG00000012646	SETDB1	96	55.388	Carlito_syrichta
ENSCSEG00000002988	setdb1b	71	72.273	ENSCAPG00000013619	SETDB1	83	58.362	Cavia_aperea
ENSCSEG00000002988	setdb1b	98	69.730	ENSCPOG00000001632	SETDB1	89	63.902	Cavia_porcellus
ENSCSEG00000002988	setdb1b	99	69.189	ENSCCAG00000024882	SETDB1	90	63.415	Cebus_capucinus
ENSCSEG00000002988	setdb1b	98	69.189	ENSCATG00000044888	SETDB1	89	63.415	Cercocebus_atys
ENSCSEG00000002988	setdb1b	98	69.189	ENSCLAG00000000242	SETDB1	89	63.415	Chinchilla_lanigera
ENSCSEG00000002988	setdb1b	88	69.189	ENSCSAG00000018034	SETDB1	90	63.415	Chlorocebus_sabaeus
ENSCSEG00000002988	setdb1b	96	73.684	ENSCHOG00000004013	SETDB1	84	72.368	Choloepus_hoffmanni
ENSCSEG00000002988	setdb1b	98	69.022	ENSCPBG00000008716	SETDB1	88	67.582	Chrysemys_picta_bellii
ENSCSEG00000002988	setdb1b	86	69.189	ENSCANG00000036388	SETDB1	88	63.415	Colobus_angolensis_palliatus
ENSCSEG00000002988	setdb1b	99	70.270	ENSCGRG00001010822	Setdb1	92	64.390	Cricetulus_griseus_chok1gshd
ENSCSEG00000002988	setdb1b	99	70.270	ENSCGRG00000005953	Setdb1	92	64.390	Cricetulus_griseus_crigri
ENSCSEG00000002988	setdb1b	100	74.835	ENSCVAG00000008877	setdb1b	99	75.770	Cyprinodon_variegatus
ENSCSEG00000002988	setdb1b	78	86.598	ENSDARG00000041243	setdb1a	59	86.598	Danio_rerio
ENSCSEG00000002988	setdb1b	99	68.957	ENSDARG00000099021	setdb1b	99	69.167	Danio_rerio
ENSCSEG00000002988	setdb1b	98	69.730	ENSDNOG00000007754	SETDB1	89	63.902	Dasypus_novemcinctus
ENSCSEG00000002988	setdb1b	98	70.787	ENSDORG00000006830	Setdb1	87	69.663	Dipodomys_ordii
ENSCSEG00000002988	setdb1b	69	47.116	ENSEBUG00000005735	setdb1b	74	61.702	Eptatretus_burgeri
ENSCSEG00000002988	setdb1b	98	69.189	ENSEASG00005002061	SETDB1	89	63.415	Equus_asinus_asinus
ENSCSEG00000002988	setdb1b	98	69.189	ENSECAG00000023954	SETDB1	89	63.415	Equus_caballus
ENSCSEG00000002988	setdb1b	84	69.730	ENSEEUG00000015825	SETDB1	71	65.951	Erinaceus_europaeus
ENSCSEG00000002988	setdb1b	100	70.608	ENSELUG00000013948	setdb1b	100	70.634	Esox_lucius
ENSCSEG00000002988	setdb1b	84	64.545	ENSELUG00000006204	-	80	70.213	Esox_lucius
ENSCSEG00000002988	setdb1b	98	69.730	ENSFCAG00000009655	SETDB1	89	63.902	Felis_catus
ENSCSEG00000002988	setdb1b	98	69.189	ENSFDAG00000021515	SETDB1	89	63.415	Fukomys_damarensis
ENSCSEG00000002988	setdb1b	100	73.476	ENSFHEG00000022195	setdb1b	99	73.693	Fundulus_heteroclitus
ENSCSEG00000002988	setdb1b	100	69.438	ENSGMOG00000005993	setdb1b	100	67.182	Gadus_morhua
ENSCSEG00000002988	setdb1b	99	68.306	ENSGALG00000024051	SETDB1	82	67.213	Gallus_gallus
ENSCSEG00000002988	setdb1b	97	73.611	ENSGAFG00000012805	setdb1b	99	74.757	Gambusia_affinis
ENSCSEG00000002988	setdb1b	100	81.538	ENSGACG00000011675	setdb1b	96	83.077	Gasterosteus_aculeatus
ENSCSEG00000002988	setdb1b	98	69.022	ENSGAGG00000005348	SETDB1	88	67.935	Gopherus_agassizii
ENSCSEG00000002988	setdb1b	98	69.189	ENSGGOG00000016308	SETDB1	89	63.415	Gorilla_gorilla
ENSCSEG00000002988	setdb1b	100	76.729	ENSHBUG00000004618	setdb1b	99	77.092	Haplochromis_burtoni
ENSCSEG00000002988	setdb1b	98	69.189	ENSHGLG00000011098	SETDB1	89	63.415	Heterocephalus_glaber_female
ENSCSEG00000002988	setdb1b	98	69.189	ENSHGLG00100009789	SETDB1	95	63.415	Heterocephalus_glaber_male
ENSCSEG00000002988	setdb1b	100	73.689	ENSHCOG00000014567	setdb1b	99	73.525	Hippocampus_comes
ENSCSEG00000002988	setdb1b	99	67.126	ENSIPUG00000004536	setdb1	94	72.431	Ictalurus_punctatus
ENSCSEG00000002988	setdb1b	68	47.106	ENSIPUG00000007923	setdb1a	58	40.642	Ictalurus_punctatus
ENSCSEG00000002988	setdb1b	98	69.730	ENSSTOG00000006770	SETDB1	92	63.902	Ictidomys_tridecemlineatus
ENSCSEG00000002988	setdb1b	100	73.589	ENSKMAG00000001197	setdb1b	100	73.354	Kryptolebias_marmoratus
ENSCSEG00000002988	setdb1b	92	84.662	ENSLBEG00000025862	setdb1b	100	75.458	Labrus_bergylta
ENSCSEG00000002988	setdb1b	99	61.009	ENSLACG00000011159	SETDB1	91	60.550	Latimeria_chalumnae
ENSCSEG00000002988	setdb1b	98	69.189	ENSLAFG00000004006	SETDB1	89	63.415	Loxodonta_africana
ENSCSEG00000002988	setdb1b	98	69.189	ENSMFAG00000042328	SETDB1	89	63.415	Macaca_fascicularis
ENSCSEG00000002988	setdb1b	98	69.189	ENSMMUG00000023235	SETDB1	89	63.415	Macaca_mulatta
ENSCSEG00000002988	setdb1b	98	69.189	ENSMNEG00000017223	SETDB1	89	63.415	Macaca_nemestrina
ENSCSEG00000002988	setdb1b	98	69.189	ENSMLEG00000033050	SETDB1	89	63.415	Mandrillus_leucophaeus
ENSCSEG00000002988	setdb1b	99	76.452	ENSMAMG00000015176	setdb1b	86	76.621	Mastacembelus_armatus
ENSCSEG00000002988	setdb1b	100	76.485	ENSMZEG00005016099	setdb1b	99	76.848	Maylandia_zebra
ENSCSEG00000002988	setdb1b	84	62.281	ENSMGAG00000001018	SETDB1	85	61.404	Meleagris_gallopavo
ENSCSEG00000002988	setdb1b	96	71.351	ENSMAUG00000021391	Setdb1	90	65.366	Mesocricetus_auratus
ENSCSEG00000002988	setdb1b	98	69.189	ENSMICG00000000425	SETDB1	89	63.415	Microcebus_murinus
ENSCSEG00000002988	setdb1b	99	69.730	ENSMOCG00000017407	Setdb1	90	64.356	Microtus_ochrogaster
ENSCSEG00000002988	setdb1b	100	79.509	ENSMMOG00000016162	setdb1b	100	79.661	Mola_mola
ENSCSEG00000002988	setdb1b	98	68.750	ENSMODG00000018821	SETDB1	81	60.766	Monodelphis_domestica
ENSCSEG00000002988	setdb1b	100	76.190	ENSMALG00000007801	setdb1b	100	76.740	Monopterus_albus
ENSCSEG00000002988	setdb1b	98	70.270	MGP_CAROLIEiJ_G0025342	Setdb1	89	64.390	Mus_caroli
ENSCSEG00000002988	setdb1b	98	71.271	ENSMUSG00000015697	Setdb1	87	70.166	Mus_musculus
ENSCSEG00000002988	setdb1b	98	69.730	ENSMPUG00000004298	SETDB1	89	63.902	Mustela_putorius_furo
ENSCSEG00000002988	setdb1b	98	69.189	ENSMLUG00000010486	SETDB1	89	63.415	Myotis_lucifugus
ENSCSEG00000002988	setdb1b	98	69.730	ENSNGAG00000020151	Setdb1	88	63.902	Nannospalax_galili
ENSCSEG00000002988	setdb1b	100	78.138	ENSNBRG00000003147	setdb1b	100	78.346	Neolamprologus_brichardi
ENSCSEG00000002988	setdb1b	98	64.141	ENSNLEG00000009996	SETDB1	89	59.174	Nomascus_leucogenys
ENSCSEG00000002988	setdb1b	88	69.189	ENSMEUG00000006544	-	77	64.315	Notamacropus_eugenii
ENSCSEG00000002988	setdb1b	98	70.225	ENSMEUG00000000555	-	89	62.136	Notamacropus_eugenii
ENSCSEG00000002988	setdb1b	95	63.699	ENSOPRG00000015349	SETDB1	87	62.329	Ochotona_princeps
ENSCSEG00000002988	setdb1b	98	69.189	ENSODEG00000012471	SETDB1	89	63.415	Octodon_degus
ENSCSEG00000002988	setdb1b	100	76.566	ENSONIG00000006454	setdb1b	100	76.721	Oreochromis_niloticus
ENSCSEG00000002988	setdb1b	98	69.730	ENSOCUG00000003642	SETDB1	89	63.902	Oryctolagus_cuniculus
ENSCSEG00000002988	setdb1b	100	76.613	ENSORLG00000010602	setdb1b	99	75.932	Oryzias_latipes
ENSCSEG00000002988	setdb1b	75	76.708	ENSORLG00020008638	setdb1b	99	75.812	Oryzias_latipes_hni
ENSCSEG00000002988	setdb1b	100	76.225	ENSORLG00015014543	setdb1b	99	75.626	Oryzias_latipes_hsok
ENSCSEG00000002988	setdb1b	100	78.553	ENSOMEG00000009457	setdb1b	100	77.655	Oryzias_melastigma
ENSCSEG00000002988	setdb1b	98	69.189	ENSOGAG00000010320	SETDB1	93	63.415	Otolemur_garnettii
ENSCSEG00000002988	setdb1b	98	69.189	ENSOARG00000020880	SETDB1	89	63.415	Ovis_aries
ENSCSEG00000002988	setdb1b	98	69.189	ENSPPAG00000041015	SETDB1	89	63.415	Pan_paniscus
ENSCSEG00000002988	setdb1b	98	69.189	ENSPPRG00000005462	SETDB1	89	63.415	Panthera_pardus
ENSCSEG00000002988	setdb1b	98	69.189	ENSPTIG00000014233	SETDB1	89	63.415	Panthera_tigris_altaica
ENSCSEG00000002988	setdb1b	98	69.189	ENSPTRG00000001267	SETDB1	89	63.415	Pan_troglodytes
ENSCSEG00000002988	setdb1b	98	69.189	ENSPANG00000020214	SETDB1	89	63.415	Papio_anubis
ENSCSEG00000002988	setdb1b	99	64.235	ENSPKIG00000010963	setdb1b	99	64.595	Paramormyrops_kingsleyae
ENSCSEG00000002988	setdb1b	58	56.193	ENSPSIG00000008407	SETDB1	71	66.474	Pelodiscus_sinensis
ENSCSEG00000002988	setdb1b	94	69.312	ENSPEMG00000010553	Setdb1	84	66.667	Peromyscus_maniculatus_bairdii
ENSCSEG00000002988	setdb1b	99	62.814	ENSPMAG00000001573	setdb1b	80	62.312	Petromyzon_marinus
ENSCSEG00000002988	setdb1b	100	73.900	ENSPFOG00000004623	-	94	71.824	Poecilia_formosa
ENSCSEG00000002988	setdb1b	100	77.815	ENSPFOG00000004429	setdb1b	99	77.152	Poecilia_formosa
ENSCSEG00000002988	setdb1b	97	74.180	ENSPLAG00000017117	setdb1b	99	73.689	Poecilia_latipinna
ENSCSEG00000002988	setdb1b	100	74.881	ENSPLAG00000019076	-	100	74.404	Poecilia_latipinna
ENSCSEG00000002988	setdb1b	100	74.683	ENSPMEG00000006468	setdb1b	99	74.265	Poecilia_mexicana
ENSCSEG00000002988	setdb1b	100	73.630	ENSPREG00000017459	setdb1b	99	74.027	Poecilia_reticulata
ENSCSEG00000002988	setdb1b	98	69.189	ENSPPYG00000000887	SETDB1	89	63.415	Pongo_abelii
ENSCSEG00000002988	setdb1b	82	57.711	ENSPCAG00000002527	SETDB1	87	57.570	Procavia_capensis
ENSCSEG00000002988	setdb1b	98	69.189	ENSPCOG00000027869	SETDB1	89	63.415	Propithecus_coquereli
ENSCSEG00000002988	setdb1b	97	58.919	ENSPVAG00000004355	SETDB1	85	57.838	Pteropus_vampyrus
ENSCSEG00000002988	setdb1b	100	75.021	ENSPNYG00000003997	setdb1b	99	74.773	Pundamilia_nyererei
ENSCSEG00000002988	setdb1b	97	42.983	ENSPNAG00000003444	setdb1a	60	83.505	Pygocentrus_nattereri
ENSCSEG00000002988	setdb1b	99	67.845	ENSPNAG00000021617	setdb1b	99	67.565	Pygocentrus_nattereri
ENSCSEG00000002988	setdb1b	98	70.270	ENSRNOG00000021143	Setdb1	89	64.390	Rattus_norvegicus
ENSCSEG00000002988	setdb1b	98	69.189	ENSRBIG00000042359	SETDB1	89	63.415	Rhinopithecus_bieti
ENSCSEG00000002988	setdb1b	98	69.189	ENSRROG00000032628	SETDB1	89	63.415	Rhinopithecus_roxellana
ENSCSEG00000002988	setdb1b	99	69.189	ENSSBOG00000028608	SETDB1	90	63.415	Saimiri_boliviensis_boliviensis
ENSCSEG00000002988	setdb1b	98	69.189	ENSSHAG00000012701	SETDB1	89	63.415	Sarcophilus_harrisii
ENSCSEG00000002988	setdb1b	99	65.180	ENSSFOG00015022183	setdb1	100	64.269	Scleropages_formosus
ENSCSEG00000002988	setdb1b	99	80.106	ENSSMAG00000015398	setdb1b	99	74.862	Scophthalmus_maximus
ENSCSEG00000002988	setdb1b	100	79.308	ENSSDUG00000007513	setdb1b	99	78.981	Seriola_dumerili
ENSCSEG00000002988	setdb1b	100	78.177	ENSSLDG00000015209	setdb1b	99	78.600	Seriola_lalandi_dorsalis
ENSCSEG00000002988	setdb1b	99	57.432	ENSSPUG00000002969	SETDB1	97	56.612	Sphenodon_punctatus
ENSCSEG00000002988	setdb1b	98	69.189	ENSSSCG00000006645	SETDB1	90	63.415	Sus_scrofa
ENSCSEG00000002988	setdb1b	94	67.391	ENSTGUG00000004684	SETDB1	80	65.217	Taeniopygia_guttata
ENSCSEG00000002988	setdb1b	100	77.008	ENSTRUG00000014641	setdb1b	99	77.806	Takifugu_rubripes
ENSCSEG00000002988	setdb1b	100	71.350	ENSTNIG00000008065	setdb1b	98	70.565	Tetraodon_nigroviridis
ENSCSEG00000002988	setdb1b	93	69.189	ENSTBEG00000009306	SETDB1	89	63.415	Tupaia_belangeri
ENSCSEG00000002988	setdb1b	85	69.189	ENSTTRG00000006966	SETDB1	69	63.415	Tursiops_truncatus
ENSCSEG00000002988	setdb1b	98	69.730	ENSUAMG00000026724	SETDB1	89	63.902	Ursus_americanus
ENSCSEG00000002988	setdb1b	98	69.730	ENSUMAG00000003141	SETDB1	89	63.902	Ursus_maritimus
ENSCSEG00000002988	setdb1b	78	59.636	ENSVPAG00000005440	SETDB1	75	59.634	Vicugna_pacos
ENSCSEG00000002988	setdb1b	98	69.730	ENSVVUG00000011637	SETDB1	89	63.902	Vulpes_vulpes
ENSCSEG00000002988	setdb1b	99	71.978	ENSXETG00000008936	setdb1	88	71.978	Xenopus_tropicalis
ENSCSEG00000002988	setdb1b	100	76.500	ENSXCOG00000019497	setdb1b	92	76.000	Xiphophorus_couchianus
ENSCSEG00000002988	setdb1b	100	75.200	ENSXMAG00000016600	setdb1b	99	75.101	Xiphophorus_maculatus