EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000003008 (Gene tree)
Gene ID: 103385932
Gene Symbol: eefsec
Alias: zgc:123265
Full Name: eukaryotic elongation factor%2C selenocysteine-tRNA specific
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 93845 bases
Position: chr11:3613801-3707645
Accession: 103385932
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004674	GTP_EFTU	PF00009.27	1.5e-29	1	1
ENSCSEP00000004655	GTP_EFTU	PF00009.27	3.9e-29	1	1
ENSCSEP00000004665	GTP_EFTU	PF00009.27	3.9e-29	1	1
ENSCSEP00000004648	GTP_EFTU	PF00009.27	4e-29	1	1
ENSCSEP00000004639	GTP_EFTU	PF00009.27	4.1e-29	1	1
ENSCSEP00000004671	GTP_EFTU	PF00009.27	4.4e-29	1	1
ENSCSEP00000004640	GTP_EFTU	PF00009.27	4.5e-29	1	1
ENSCSEP00000004674	MMR_HSR1	PF01926.23	8.1e-07	1	1
ENSCSEP00000004655	MMR_HSR1	PF01926.23	1.8e-06	1	1
ENSCSEP00000004665	MMR_HSR1	PF01926.23	1.8e-06	1	1
ENSCSEP00000004639	MMR_HSR1	PF01926.23	1.8e-06	1	1
ENSCSEP00000004648	MMR_HSR1	PF01926.23	1.8e-06	1	1
ENSCSEP00000004640	MMR_HSR1	PF01926.23	1.9e-06	1	1
ENSCSEP00000004671	MMR_HSR1	PF01926.23	2e-06	1	1
ENSCSEP00000004648	GTP_EFTU_D2	PF03144.25	3.1e-07	1	1
ENSCSEP00000004655	GTP_EFTU_D2	PF03144.25	3.1e-07	1	1
ENSCSEP00000004665	GTP_EFTU_D2	PF03144.25	3.1e-07	1	1
ENSCSEP00000004639	GTP_EFTU_D2	PF03144.25	3.1e-07	1	1
ENSCSEP00000004640	GTP_EFTU_D2	PF03144.25	3.3e-07	1	1
ENSCSEP00000004671	GTP_EFTU_D2	PF03144.25	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004704	-	1808	-	ENSCSEP00000004648	559 (aa)	-	-
ENSCSET00000004711	-	2888	-	ENSCSEP00000004655	546 (aa)	-	UPI0004966089
ENSCSET00000004721	-	1831	XM_008319963	ENSCSEP00000004665	546 (aa)	XP_008318185	UPI0004966089
ENSCSET00000004727	-	2725	XM_008319960	ENSCSEP00000004671	588 (aa)	XP_008318182	UPI000494DD5B
ENSCSET00000004695	-	1923	-	ENSCSEP00000004639	560 (aa)	XP_024915545	UPI000D62F015
ENSCSET00000004696	-	4877	-	ENSCSEP00000004640	587 (aa)	-	-
ENSCSET00000004730	-	1101	-	ENSCSEP00000004674	366 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000003008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003008	eefsec	99	65.836	ENSG00000132394	EEFSEC	99	61.258	Homo_sapiens
ENSCSEG00000003008	eefsec	99	89.888	ENSAPOG00000015931	eefsec	100	87.755	Acanthochromis_polyacanthus
ENSCSEG00000003008	eefsec	82	60.043	ENSAMEG00000015165	EEFSEC	90	60.043	Ailuropoda_melanoleuca
ENSCSEG00000003008	eefsec	99	89.011	ENSACIG00000022407	eefsec	99	93.676	Amphilophus_citrinellus
ENSCSEG00000003008	eefsec	99	89.888	ENSAOCG00000008603	eefsec	100	88.095	Amphiprion_ocellaris
ENSCSEG00000003008	eefsec	99	90.262	ENSAPEG00000017090	eefsec	100	87.925	Amphiprion_percula
ENSCSEG00000003008	eefsec	99	91.011	ENSATEG00000002753	eefsec	100	87.755	Anabas_testudineus
ENSCSEG00000003008	eefsec	77	66.820	ENSAPLG00000006745	EEFSEC	100	66.515	Anas_platyrhynchos
ENSCSEG00000003008	eefsec	99	64.769	ENSANAG00000032691	EEFSEC	99	60.755	Aotus_nancymaae
ENSCSEG00000003008	eefsec	99	93.701	ENSACLG00000024565	eefsec	100	92.748	Astatotilapia_calliptera
ENSCSEG00000003008	eefsec	99	82.470	ENSAMXG00000002260	eefsec	99	73.299	Astyanax_mexicanus
ENSCSEG00000003008	eefsec	99	71.260	ENSBTAG00000030962	EEFSEC	99	71.260	Bos_taurus
ENSCSEG00000003008	eefsec	85	42.857	WBGene00008133	efsc-1	93	32.458	Caenorhabditis_elegans
ENSCSEG00000003008	eefsec	99	64.769	ENSCJAG00000005387	EEFSEC	99	60.328	Callithrix_jacchus
ENSCSEG00000003008	eefsec	99	64.561	ENSCAFG00000004135	EEFSEC	80	60.656	Canis_familiaris
ENSCSEG00000003008	eefsec	99	64.561	ENSCAFG00020004811	EEFSEC	99	60.656	Canis_lupus_dingo
ENSCSEG00000003008	eefsec	99	70.079	ENSCHIG00000021838	EEFSEC	99	62.752	Capra_hircus
ENSCSEG00000003008	eefsec	99	65.480	ENSTSYG00000012922	EEFSEC	99	62.086	Carlito_syrichta
ENSCSEG00000003008	eefsec	82	56.461	ENSCAPG00000000084	EEFSEC	98	56.287	Cavia_aperea
ENSCSEG00000003008	eefsec	99	65.141	ENSCPOG00000024352	EEFSEC	99	71.269	Cavia_porcellus
ENSCSEG00000003008	eefsec	99	65.018	ENSCCAG00000031336	EEFSEC	99	60.984	Cebus_capucinus
ENSCSEG00000003008	eefsec	99	65.480	ENSCATG00000019414	EEFSEC	99	60.791	Cercocebus_atys
ENSCSEG00000003008	eefsec	99	66.176	ENSCLAG00000006973	EEFSEC	99	70.522	Chinchilla_lanigera
ENSCSEG00000003008	eefsec	99	65.125	ENSCSAG00000008599	EEFSEC	99	60.927	Chlorocebus_sabaeus
ENSCSEG00000003008	eefsec	99	69.061	ENSCPBG00000014356	EEFSEC	87	68.293	Chrysemys_picta_bellii
ENSCSEG00000003008	eefsec	98	65.789	ENSCSAVG00000002208	-	100	60.067	Ciona_savignyi
ENSCSEG00000003008	eefsec	99	64.769	ENSCANG00000031492	EEFSEC	99	60.626	Colobus_angolensis_palliatus
ENSCSEG00000003008	eefsec	99	65.018	ENSCGRG00001018089	Eefsec	99	62.521	Cricetulus_griseus_chok1gshd
ENSCSEG00000003008	eefsec	98	64.643	ENSCGRG00000010063	Eefsec	98	71.591	Cricetulus_griseus_crigri
ENSCSEG00000003008	eefsec	99	88.390	ENSCVAG00000005381	eefsec	100	85.714	Cyprinodon_variegatus
ENSCSEG00000003008	eefsec	99	85.259	ENSDARG00000004696	eefsec	99	76.471	Danio_rerio
ENSCSEG00000003008	eefsec	99	66.787	ENSDNOG00000008925	EEFSEC	99	63.149	Dasypus_novemcinctus
ENSCSEG00000003008	eefsec	82	51.102	ENSDORG00000000264	Eefsec	80	77.358	Dipodomys_ordii
ENSCSEG00000003008	eefsec	94	50.388	FBgn0034627	eEFSec	95	50.575	Drosophila_melanogaster
ENSCSEG00000003008	eefsec	90	64.286	ENSETEG00000007406	EEFSEC	99	55.041	Echinops_telfairi
ENSCSEG00000003008	eefsec	79	74.490	ENSEBUG00000015029	eefsec	97	50.180	Eptatretus_burgeri
ENSCSEG00000003008	eefsec	99	65.000	ENSEASG00005006786	EEFSEC	99	61.576	Equus_asinus_asinus
ENSCSEG00000003008	eefsec	99	65.000	ENSECAG00000016565	EEFSEC	99	61.614	Equus_caballus
ENSCSEG00000003008	eefsec	98	79.381	ENSELUG00000016632	eefsec	98	79.381	Esox_lucius
ENSCSEG00000003008	eefsec	99	65.018	ENSFCAG00000006153	EEFSEC	99	62.109	Felis_catus
ENSCSEG00000003008	eefsec	82	65.051	ENSFALG00000007901	EEFSEC	99	65.051	Ficedula_albicollis
ENSCSEG00000003008	eefsec	82	60.198	ENSFDAG00000010243	EEFSEC	84	75.926	Fukomys_damarensis
ENSCSEG00000003008	eefsec	99	89.888	ENSFHEG00000007155	eefsec	100	86.565	Fundulus_heteroclitus
ENSCSEG00000003008	eefsec	99	76.000	ENSGMOG00000007705	eefsec	99	75.862	Gadus_morhua
ENSCSEG00000003008	eefsec	99	68.635	ENSGALG00000038684	EEFSEC	99	65.758	Gallus_gallus
ENSCSEG00000003008	eefsec	99	89.139	ENSGAFG00000021692	eefsec	100	85.714	Gambusia_affinis
ENSCSEG00000003008	eefsec	99	88.806	ENSGACG00000000793	eefsec	99	87.500	Gasterosteus_aculeatus
ENSCSEG00000003008	eefsec	99	67.528	ENSGAGG00000002059	EEFSEC	97	66.156	Gopherus_agassizii
ENSCSEG00000003008	eefsec	86	60.728	ENSGGOG00000001445	EEFSEC	98	60.728	Gorilla_gorilla
ENSCSEG00000003008	eefsec	99	93.701	ENSHBUG00000008917	eefsec	99	90.226	Haplochromis_burtoni
ENSCSEG00000003008	eefsec	99	66.790	ENSHGLG00000000094	EEFSEC	99	68.000	Heterocephalus_glaber_female
ENSCSEG00000003008	eefsec	98	66.790	ENSHGLG00100011393	EEFSEC	94	61.551	Heterocephalus_glaber_male
ENSCSEG00000003008	eefsec	99	85.606	ENSHCOG00000004193	eefsec	99	82.112	Hippocampus_comes
ENSCSEG00000003008	eefsec	99	79.545	ENSIPUG00000017291	eefsec	97	75.922	Ictalurus_punctatus
ENSCSEG00000003008	eefsec	82	60.922	ENSSTOG00000019802	EEFSEC	99	60.922	Ictidomys_tridecemlineatus
ENSCSEG00000003008	eefsec	73	71.161	ENSJJAG00000020703	-	99	71.161	Jaculus_jaculus
ENSCSEG00000003008	eefsec	99	88.015	ENSKMAG00000019907	eefsec	100	85.544	Kryptolebias_marmoratus
ENSCSEG00000003008	eefsec	99	89.888	ENSLBEG00000017908	eefsec	100	88.435	Labrus_bergylta
ENSCSEG00000003008	eefsec	78	78.857	ENSLACG00000013137	EEFSEC	95	70.866	Latimeria_chalumnae
ENSCSEG00000003008	eefsec	99	78.148	ENSLOCG00000014535	eefsec	98	75.563	Lepisosteus_oculatus
ENSCSEG00000003008	eefsec	99	63.004	ENSLAFG00000001997	EEFSEC	99	59.933	Loxodonta_africana
ENSCSEG00000003008	eefsec	99	65.480	ENSMFAG00000042128	EEFSEC	99	60.927	Macaca_fascicularis
ENSCSEG00000003008	eefsec	77	68.269	ENSMMUG00000018663	EEFSEC	97	68.269	Macaca_mulatta
ENSCSEG00000003008	eefsec	99	65.480	ENSMNEG00000028574	EEFSEC	99	60.762	Macaca_nemestrina
ENSCSEG00000003008	eefsec	83	59.091	ENSMLEG00000041771	EEFSEC	93	59.091	Mandrillus_leucophaeus
ENSCSEG00000003008	eefsec	99	90.262	ENSMAMG00000023964	eefsec	99	94.466	Mastacembelus_armatus
ENSCSEG00000003008	eefsec	99	88.767	ENSMZEG00005009380	eefsec	100	92.748	Maylandia_zebra
ENSCSEG00000003008	eefsec	71	63.819	ENSMGAG00000007243	EEFSEC	100	63.819	Meleagris_gallopavo
ENSCSEG00000003008	eefsec	97	63.670	ENSMAUG00000011197	Eefsec	99	71.536	Mesocricetus_auratus
ENSCSEG00000003008	eefsec	99	66.790	ENSMOCG00000017748	Eefsec	99	71.111	Microtus_ochrogaster
ENSCSEG00000003008	eefsec	99	89.532	ENSMMOG00000021820	eefsec	99	90.226	Mola_mola
ENSCSEG00000003008	eefsec	94	65.607	ENSMODG00000008034	EEFSEC	81	65.428	Monodelphis_domestica
ENSCSEG00000003008	eefsec	98	89.513	ENSMALG00000016211	eefsec	99	89.403	Monopterus_albus
ENSCSEG00000003008	eefsec	99	66.788	MGP_CAROLIEiJ_G0028627	Eefsec	99	71.481	Mus_caroli
ENSCSEG00000003008	eefsec	99	66.788	ENSMUSG00000033216	Eefsec	99	71.481	Mus_musculus
ENSCSEG00000003008	eefsec	99	66.788	MGP_PahariEiJ_G0022366	Eefsec	99	71.481	Mus_pahari
ENSCSEG00000003008	eefsec	99	66.788	MGP_SPRETEiJ_G0029640	Eefsec	99	71.481	Mus_spretus
ENSCSEG00000003008	eefsec	99	64.769	ENSMPUG00000017340	EEFSEC	95	61.360	Mustela_putorius_furo
ENSCSEG00000003008	eefsec	82	60.390	ENSMLUG00000004261	EEFSEC	99	59.208	Myotis_lucifugus
ENSCSEG00000003008	eefsec	73	71.536	ENSNGAG00000023278	-	99	71.536	Nannospalax_galili
ENSCSEG00000003008	eefsec	99	93.701	ENSNBRG00000002387	eefsec	100	92.748	Neolamprologus_brichardi
ENSCSEG00000003008	eefsec	99	65.125	ENSNLEG00000014303	EEFSEC	99	60.762	Nomascus_leucogenys
ENSCSEG00000003008	eefsec	82	62.828	ENSMEUG00000005747	EEFSEC	99	62.222	Notamacropus_eugenii
ENSCSEG00000003008	eefsec	98	66.182	ENSOPRG00000011276	EEFSEC	99	61.833	Ochotona_princeps
ENSCSEG00000003008	eefsec	99	65.809	ENSODEG00000002928	EEFSEC	99	70.149	Octodon_degus
ENSCSEG00000003008	eefsec	81	86.820	ENSONIG00000019038	eefsec	100	88.075	Oreochromis_niloticus
ENSCSEG00000003008	eefsec	81	62.146	ENSOANG00000009108	EEFSEC	99	62.146	Ornithorhynchus_anatinus
ENSCSEG00000003008	eefsec	98	66.909	ENSOCUG00000016517	EEFSEC	99	61.873	Oryctolagus_cuniculus
ENSCSEG00000003008	eefsec	99	86.891	ENSORLG00000001377	eefsec	99	90.945	Oryzias_latipes
ENSCSEG00000003008	eefsec	99	86.891	ENSORLG00020000729	eefsec	99	90.945	Oryzias_latipes_hni
ENSCSEG00000003008	eefsec	99	86.891	ENSORLG00015001986	eefsec	100	83.503	Oryzias_latipes_hsok
ENSCSEG00000003008	eefsec	83	81.429	ENSOMEG00000010071	eefsec	89	81.224	Oryzias_melastigma
ENSCSEG00000003008	eefsec	79	62.472	ENSOGAG00000014084	EEFSEC	98	62.138	Otolemur_garnettii
ENSCSEG00000003008	eefsec	68	60.724	ENSOARG00000004600	EEFSEC	100	60.724	Ovis_aries
ENSCSEG00000003008	eefsec	99	65.480	ENSPPAG00000030936	EEFSEC	99	61.093	Pan_paniscus
ENSCSEG00000003008	eefsec	99	65.836	ENSPPRG00000002846	EEFSEC	99	62.252	Panthera_pardus
ENSCSEG00000003008	eefsec	85	60.385	ENSPTIG00000013855	EEFSEC	92	59.923	Panthera_tigris_altaica
ENSCSEG00000003008	eefsec	99	65.480	ENSPTRG00000015353	EEFSEC	99	61.093	Pan_troglodytes
ENSCSEG00000003008	eefsec	99	65.480	ENSPANG00000017041	EEFSEC	99	61.093	Papio_anubis
ENSCSEG00000003008	eefsec	99	85.259	ENSPKIG00000005220	eefsec	99	80.882	Paramormyrops_kingsleyae
ENSCSEG00000003008	eefsec	82	80.769	ENSPSIG00000015135	EEFSEC	98	67.917	Pelodiscus_sinensis
ENSCSEG00000003008	eefsec	98	83.448	ENSPMGG00000020300	eefsec	99	83.103	Periophthalmus_magnuspinnatus
ENSCSEG00000003008	eefsec	99	67.159	ENSPEMG00000013677	Eefsec	99	71.910	Peromyscus_maniculatus_bairdii
ENSCSEG00000003008	eefsec	94	67.742	ENSPMAG00000006779	eefsec	98	68.302	Petromyzon_marinus
ENSCSEG00000003008	eefsec	81	61.633	ENSPCIG00000020494	EEFSEC	99	61.224	Phascolarctos_cinereus
ENSCSEG00000003008	eefsec	99	89.513	ENSPFOG00000003748	eefsec	100	85.714	Poecilia_formosa
ENSCSEG00000003008	eefsec	99	89.513	ENSPLAG00000018012	eefsec	99	85.959	Poecilia_latipinna
ENSCSEG00000003008	eefsec	99	89.513	ENSPMEG00000001202	eefsec	100	86.054	Poecilia_mexicana
ENSCSEG00000003008	eefsec	99	89.888	ENSPREG00000012235	eefsec	100	86.054	Poecilia_reticulata
ENSCSEG00000003008	eefsec	99	64.769	ENSPPYG00000013436	EEFSEC	99	60.626	Pongo_abelii
ENSCSEG00000003008	eefsec	71	78.846	ENSPCAG00000005883	EEFSEC	99	55.473	Procavia_capensis
ENSCSEG00000003008	eefsec	99	69.531	ENSPCOG00000023432	EEFSEC	99	61.500	Propithecus_coquereli
ENSCSEG00000003008	eefsec	99	67.568	ENSPVAG00000007070	EEFSEC	64	67.568	Pteropus_vampyrus
ENSCSEG00000003008	eefsec	99	93.307	ENSPNYG00000005726	eefsec	100	92.366	Pundamilia_nyererei
ENSCSEG00000003008	eefsec	100	78.358	ENSPNAG00000016724	eefsec	99	74.177	Pygocentrus_nattereri
ENSCSEG00000003008	eefsec	99	66.788	ENSRNOG00000012954	Eefsec	99	70.751	Rattus_norvegicus
ENSCSEG00000003008	eefsec	99	65.125	ENSRBIG00000032635	EEFSEC	99	60.855	Rhinopithecus_bieti
ENSCSEG00000003008	eefsec	68	70.800	ENSRROG00000030260	-	85	69.261	Rhinopithecus_roxellana
ENSCSEG00000003008	eefsec	81	58.717	ENSSBOG00000031478	EEFSEC	99	58.717	Saimiri_boliviensis_boliviensis
ENSCSEG00000003008	eefsec	81	61.837	ENSSHAG00000014760	EEFSEC	99	61.914	Sarcophilus_harrisii
ENSCSEG00000003008	eefsec	99	83.730	ENSSFOG00015021109	eefsec	98	75.042	Scleropages_formosus
ENSCSEG00000003008	eefsec	99	89.394	ENSSMAG00000001454	eefsec	99	88.388	Scophthalmus_maximus
ENSCSEG00000003008	eefsec	100	88.605	ENSSDUG00000007924	eefsec	99	90.113	Seriola_dumerili
ENSCSEG00000003008	eefsec	97	90.152	ENSSLDG00000024985	eefsec	99	88.368	Seriola_lalandi_dorsalis
ENSCSEG00000003008	eefsec	56	73.469	ENSSARG00000003789	-	56	73.469	Sorex_araneus
ENSCSEG00000003008	eefsec	81	64.286	ENSSPUG00000004191	EEFSEC	100	64.490	Sphenodon_punctatus
ENSCSEG00000003008	eefsec	99	91.760	ENSSPAG00000001320	eefsec	99	91.729	Stegastes_partitus
ENSCSEG00000003008	eefsec	99	70.751	ENSSSCG00000011619	EEFSEC	99	66.938	Sus_scrofa
ENSCSEG00000003008	eefsec	99	72.112	ENSTGUG00000007895	EEFSEC	99	65.816	Taeniopygia_guttata
ENSCSEG00000003008	eefsec	99	92.520	ENSTRUG00000010327	eefsec	99	84.327	Takifugu_rubripes
ENSCSEG00000003008	eefsec	99	90.551	ENSTNIG00000003225	eefsec	99	84.801	Tetraodon_nigroviridis
ENSCSEG00000003008	eefsec	99	69.020	ENSTTRG00000000994	EEFSEC	99	62.375	Tursiops_truncatus
ENSCSEG00000003008	eefsec	99	65.836	ENSUAMG00000017283	EEFSEC	99	61.653	Ursus_americanus
ENSCSEG00000003008	eefsec	78	61.589	ENSVVUG00000018372	EEFSEC	92	61.589	Vulpes_vulpes
ENSCSEG00000003008	eefsec	85	68.619	ENSXETG00000002066	eefsec	99	68.619	Xenopus_tropicalis
ENSCSEG00000003008	eefsec	99	90.637	ENSXCOG00000019916	eefsec	99	87.241	Xiphophorus_couchianus
ENSCSEG00000003008	eefsec	99	89.888	ENSXMAG00000001839	eefsec	100	86.054	Xiphophorus_maculatus