EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000003083 (Gene tree)
Gene ID: 103387067
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 11758 bases
Position: chr12:4116520-4128277
Accession: 103387067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004769	zf-C2H2	PF00096.26	1e-11	1	2
ENSCSEP00000004769	zf-C2H2	PF00096.26	1e-11	2	2
ENSCSEP00000004774	zf-C2H2	PF00096.26	1.1e-11	1	2
ENSCSEP00000004774	zf-C2H2	PF00096.26	1.1e-11	2	2
ENSCSEP00000004770	zf-C2H2	PF00096.26	3.4e-08	1	2
ENSCSEP00000004770	zf-C2H2	PF00096.26	3.4e-08	2	2
ENSCSEP00000004769	zf-met	PF12874.7	3.9e-07	1	1
ENSCSEP00000004774	zf-met	PF12874.7	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004830	-	6264	XM_008321562	ENSCSEP00000004774	584 (aa)	XP_008319784	UPI000496B617
ENSCSET00000004827	-	6236	-	ENSCSEP00000004770	568 (aa)	-	-
ENSCSET00000004825	-	7083	XM_008321563	ENSCSEP00000004769	576 (aa)	XP_008319785	UPI00049558E3

Gene Model

Click here to download ENSCSEG00000003083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000003083	zbtb18	91	40.541	ENSCSEG00000016440	zbtb16a	51	40.171
ENSCSEG00000003083	zbtb18	53	38.462	ENSCSEG00000002879	bcl6aa	56	38.462
ENSCSEG00000003083	zbtb18	50	35.537	ENSCSEG00000018698	ZBTB14	62	39.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003083	zbtb18	100	93.437	ENSAPOG00000005168	zbtb18	100	93.437	Acanthochromis_polyacanthus
ENSCSEG00000003083	zbtb18	99	84.035	ENSACIG00000008655	zbtb18	100	83.595	Amphilophus_citrinellus
ENSCSEG00000003083	zbtb18	100	93.186	ENSAOCG00000014105	zbtb18	100	93.186	Amphiprion_ocellaris
ENSCSEG00000003083	zbtb18	100	92.440	ENSAPEG00000003817	zbtb18	79	92.612	Amphiprion_percula
ENSCSEG00000003083	zbtb18	100	92.361	ENSATEG00000010192	zbtb18	100	92.361	Anabas_testudineus
ENSCSEG00000003083	zbtb18	100	93.322	ENSACLG00000022978	zbtb18	100	93.322	Astatotilapia_calliptera
ENSCSEG00000003083	zbtb18	99	72.978	ENSAMXG00000042119	zbtb18	99	72.289	Astyanax_mexicanus
ENSCSEG00000003083	zbtb18	100	91.267	ENSCVAG00000016785	zbtb18	100	91.267	Cyprinodon_variegatus
ENSCSEG00000003083	zbtb18	98	72.775	ENSDARG00000028228	zbtb18	100	74.216	Danio_rerio
ENSCSEG00000003083	zbtb18	100	75.690	ENSELUG00000013471	zbtb18	100	74.828	Esox_lucius
ENSCSEG00000003083	zbtb18	99	90.418	ENSFHEG00000020005	zbtb18	99	90.418	Fundulus_heteroclitus
ENSCSEG00000003083	zbtb18	55	96.183	ENSGMOG00000018718	zbtb18	59	92.254	Gadus_morhua
ENSCSEG00000003083	zbtb18	99	88.850	ENSGAFG00000000619	zbtb18	99	88.850	Gambusia_affinis
ENSCSEG00000003083	zbtb18	100	87.326	ENSGACG00000010518	zbtb18	97	87.674	Gasterosteus_aculeatus
ENSCSEG00000003083	zbtb18	100	93.229	ENSHBUG00000013654	zbtb18	100	93.229	Haplochromis_burtoni
ENSCSEG00000003083	zbtb18	61	82.105	ENSHCOG00000002345	zbtb18	94	82.105	Hippocampus_comes
ENSCSEG00000003083	zbtb18	100	66.105	ENSIPUG00000008912	zbtb18	99	66.781	Ictalurus_punctatus
ENSCSEG00000003083	zbtb18	100	92.637	ENSKMAG00000002780	zbtb18	100	92.637	Kryptolebias_marmoratus
ENSCSEG00000003083	zbtb18	100	91.667	ENSLBEG00000014796	zbtb18	100	91.667	Labrus_bergylta
ENSCSEG00000003083	zbtb18	84	59.600	ENSMFAG00000033326	ZBTB18	99	59.000	Macaca_fascicularis
ENSCSEG00000003083	zbtb18	84	60.120	ENSMMUG00000015664	ZBTB18	100	59.514	Macaca_mulatta
ENSCSEG00000003083	zbtb18	100	92.535	ENSMAMG00000021720	zbtb18	100	92.535	Mastacembelus_armatus
ENSCSEG00000003083	zbtb18	100	93.322	ENSMZEG00005027394	zbtb18	100	93.322	Maylandia_zebra
ENSCSEG00000003083	zbtb18	94	51.009	ENSMGAG00000015389	-	100	52.091	Meleagris_gallopavo
ENSCSEG00000003083	zbtb18	98	84.629	ENSMMOG00000007888	zbtb18	99	84.629	Mola_mola
ENSCSEG00000003083	zbtb18	100	91.840	ENSMALG00000000725	zbtb18	100	91.840	Monopterus_albus
ENSCSEG00000003083	zbtb18	98	92.920	ENSNBRG00000013796	zbtb18	100	92.920	Neolamprologus_brichardi
ENSCSEG00000003083	zbtb18	100	93.056	ENSONIG00000000862	zbtb18	100	93.056	Oreochromis_niloticus
ENSCSEG00000003083	zbtb18	100	90.925	ENSORLG00000027425	zbtb18	100	90.925	Oryzias_latipes
ENSCSEG00000003083	zbtb18	100	91.096	ENSORLG00020011988	zbtb18	100	91.096	Oryzias_latipes_hni
ENSCSEG00000003083	zbtb18	100	91.267	ENSORLG00015017457	zbtb18	100	91.267	Oryzias_latipes_hsok
ENSCSEG00000003083	zbtb18	100	91.438	ENSOMEG00000011249	zbtb18	100	91.438	Oryzias_melastigma
ENSCSEG00000003083	zbtb18	98	55.017	ENSPKIG00000008787	-	100	55.017	Paramormyrops_kingsleyae
ENSCSEG00000003083	zbtb18	99	69.535	ENSPKIG00000021964	zbtb18	97	69.192	Paramormyrops_kingsleyae
ENSCSEG00000003083	zbtb18	98	81.947	ENSPMGG00000008020	zbtb18	100	81.416	Periophthalmus_magnuspinnatus
ENSCSEG00000003083	zbtb18	98	88.142	ENSPFOG00000022080	zbtb18	100	88.142	Poecilia_formosa
ENSCSEG00000003083	zbtb18	98	83.569	ENSPLAG00000020960	zbtb18	100	83.569	Poecilia_latipinna
ENSCSEG00000003083	zbtb18	98	83.569	ENSPLAG00000011299	-	100	83.569	Poecilia_latipinna
ENSCSEG00000003083	zbtb18	98	89.223	ENSPMEG00000007554	zbtb18	100	89.223	Poecilia_mexicana
ENSCSEG00000003083	zbtb18	100	89.744	ENSPREG00000008576	zbtb18	100	89.744	Poecilia_reticulata
ENSCSEG00000003083	zbtb18	100	93.229	ENSPNYG00000001530	zbtb18	100	93.229	Pundamilia_nyererei
ENSCSEG00000003083	zbtb18	88	68.321	ENSPNAG00000014066	zbtb18	89	67.698	Pygocentrus_nattereri
ENSCSEG00000003083	zbtb18	98	91.327	ENSSMAG00000018041	zbtb18	100	91.327	Scophthalmus_maximus
ENSCSEG00000003083	zbtb18	98	93.097	ENSSDUG00000018660	zbtb18	100	93.097	Seriola_dumerili
ENSCSEG00000003083	zbtb18	98	93.097	ENSSLDG00000022573	zbtb18	100	93.097	Seriola_lalandi_dorsalis
ENSCSEG00000003083	zbtb18	94	50.826	ENSSPUG00000010554	-	100	51.607	Sphenodon_punctatus
ENSCSEG00000003083	zbtb18	100	93.576	ENSSPAG00000002691	zbtb18	100	93.576	Stegastes_partitus
ENSCSEG00000003083	zbtb18	98	90.796	ENSTRUG00000020604	zbtb18	100	90.796	Takifugu_rubripes
ENSCSEG00000003083	zbtb18	99	84.642	ENSTNIG00000000430	zbtb18	99	85.340	Tetraodon_nigroviridis
ENSCSEG00000003083	zbtb18	98	84.452	ENSXCOG00000013308	zbtb18	100	85.336	Xiphophorus_couchianus
ENSCSEG00000003083	zbtb18	99	80.736	ENSXMAG00000018241	zbtb18	99	80.736	Xiphophorus_maculatus