EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000003160 (Gene tree)
Gene ID: 103380001
Gene Symbol: snupn
Alias: rnut1|wu:fc41a03|zgc:77819
Full Name: snurportin 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 9138 bases
Position: chr6:8050012-8059149
Accession: 103380001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004874	Snurportin1	PF11538.8	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000004930	-	5271	XM_008311759	ENSCSEP00000004874	418 (aa)	XP_008309981	UPI000496B19A

Gene Model

Click here to download ENSCSEG00000003160's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003160	snupn	86	61.308	ENSG00000169371	SNUPN	100	71.429	Homo_sapiens
ENSCSEG00000003160	snupn	89	82.842	ENSAPOG00000016953	snupn	100	82.842	Acanthochromis_polyacanthus
ENSCSEG00000003160	snupn	84	62.079	ENSAMEG00000008291	SNUPN	95	62.745	Ailuropoda_melanoleuca
ENSCSEG00000003160	snupn	89	81.233	ENSACIG00000012409	snupn	100	81.233	Amphilophus_citrinellus
ENSCSEG00000003160	snupn	89	82.574	ENSAOCG00000018096	snupn	100	82.574	Amphiprion_ocellaris
ENSCSEG00000003160	snupn	89	82.842	ENSAPEG00000008834	snupn	100	82.842	Amphiprion_percula
ENSCSEG00000003160	snupn	89	82.038	ENSATEG00000021019	snupn	100	82.038	Anabas_testudineus
ENSCSEG00000003160	snupn	84	62.890	ENSANAG00000025568	SNUPN	95	64.023	Aotus_nancymaae
ENSCSEG00000003160	snupn	89	81.233	ENSACLG00000025155	snupn	100	81.233	Astatotilapia_calliptera
ENSCSEG00000003160	snupn	85	74.581	ENSAMXG00000038311	snupn	98	74.581	Astyanax_mexicanus
ENSCSEG00000003160	snupn	84	61.732	ENSBTAG00000021293	SNUPN	95	62.465	Bos_taurus
ENSCSEG00000003160	snupn	74	40.968	WBGene00017746	F23F1.5	89	40.968	Caenorhabditis_elegans
ENSCSEG00000003160	snupn	84	62.323	ENSCJAG00000003005	SNUPN	95	63.277	Callithrix_jacchus
ENSCSEG00000003160	snupn	84	62.040	ENSCAFG00000018035	SNUPN	95	62.994	Canis_familiaris
ENSCSEG00000003160	snupn	84	61.173	ENSCHIG00000018047	SNUPN	95	62.011	Capra_hircus
ENSCSEG00000003160	snupn	84	61.517	ENSTSYG00000037224	SNUPN	95	61.517	Carlito_syrichta
ENSCSEG00000003160	snupn	84	56.583	ENSCAPG00000005061	SNUPN	95	56.583	Cavia_aperea
ENSCSEG00000003160	snupn	84	64.045	ENSCPOG00000034772	SNUPN	95	64.045	Cavia_porcellus
ENSCSEG00000003160	snupn	84	63.739	ENSCCAG00000016169	-	95	64.873	Cebus_capucinus
ENSCSEG00000003160	snupn	84	61.905	ENSCATG00000039783	SNUPN	95	63.025	Cercocebus_atys
ENSCSEG00000003160	snupn	83	61.864	ENSCLAG00000016968	SNUPN	95	62.640	Chinchilla_lanigera
ENSCSEG00000003160	snupn	84	61.345	ENSCSAG00000019246	-	95	62.465	Chlorocebus_sabaeus
ENSCSEG00000003160	snupn	84	61.905	ENSCSAG00000014576	-	85	63.025	Chlorocebus_sabaeus
ENSCSEG00000003160	snupn	84	47.899	ENSCHOG00000005403	SNUPN	95	48.603	Choloepus_hoffmanni
ENSCSEG00000003160	snupn	85	63.361	ENSCPBG00000022172	SNUPN	92	63.361	Chrysemys_picta_bellii
ENSCSEG00000003160	snupn	84	62.185	ENSCANG00000029707	SNUPN	95	63.305	Colobus_angolensis_palliatus
ENSCSEG00000003160	snupn	84	61.905	ENSCGRG00001004622	Snupn	96	63.025	Cricetulus_griseus_chok1gshd
ENSCSEG00000003160	snupn	84	61.905	ENSCGRG00000002515	Snupn	96	63.025	Cricetulus_griseus_crigri
ENSCSEG00000003160	snupn	89	78.075	ENSCVAG00000010502	snupn	100	78.075	Cyprinodon_variegatus
ENSCSEG00000003160	snupn	89	70.321	ENSDARG00000008395	snupn	100	70.321	Danio_rerio
ENSCSEG00000003160	snupn	85	60.724	ENSDNOG00000044304	SNUPN	95	60.590	Dasypus_novemcinctus
ENSCSEG00000003160	snupn	84	61.732	ENSDORG00000009051	Snupn	95	62.291	Dipodomys_ordii
ENSCSEG00000003160	snupn	84	51.685	ENSETEG00000013792	SNUPN	95	51.685	Echinops_telfairi
ENSCSEG00000003160	snupn	86	51.752	ENSEBUG00000006682	snupn	95	51.752	Eptatretus_burgeri
ENSCSEG00000003160	snupn	85	61.157	ENSEASG00005015697	SNUPN	94	62.637	Equus_asinus_asinus
ENSCSEG00000003160	snupn	84	61.345	ENSECAG00000017726	SNUPN	95	62.849	Equus_caballus
ENSCSEG00000003160	snupn	58	61.878	ENSEEUG00000000981	-	65	63.736	Erinaceus_europaeus
ENSCSEG00000003160	snupn	89	71.948	ENSELUG00000023305	snupn	99	71.948	Esox_lucius
ENSCSEG00000003160	snupn	84	61.236	ENSFCAG00000040981	SNUPN	95	61.905	Felis_catus
ENSCSEG00000003160	snupn	84	62.921	ENSFDAG00000011599	SNUPN	96	62.921	Fukomys_damarensis
ENSCSEG00000003160	snupn	89	80.429	ENSFHEG00000017627	snupn	100	80.429	Fundulus_heteroclitus
ENSCSEG00000003160	snupn	84	77.429	ENSGMOG00000009272	snupn	100	79.487	Gadus_morhua
ENSCSEG00000003160	snupn	80	59.767	ENSGALG00000029537	SNUPN	95	59.444	Gallus_gallus
ENSCSEG00000003160	snupn	89	79.947	ENSGAFG00000004954	snupn	100	79.947	Gambusia_affinis
ENSCSEG00000003160	snupn	84	84.857	ENSGACG00000007450	snupn	100	84.857	Gasterosteus_aculeatus
ENSCSEG00000003160	snupn	84	62.500	ENSGAGG00000022470	SNUPN	95	63.333	Gopherus_agassizii
ENSCSEG00000003160	snupn	50	60.317	ENSGGOG00000004581	-	96	60.317	Gorilla_gorilla
ENSCSEG00000003160	snupn	89	81.233	ENSHBUG00000006950	snupn	100	81.233	Haplochromis_burtoni
ENSCSEG00000003160	snupn	84	61.690	ENSHGLG00000000536	SNUPN	96	62.360	Heterocephalus_glaber_female
ENSCSEG00000003160	snupn	84	61.690	ENSHGLG00100016161	SNUPN	96	62.360	Heterocephalus_glaber_male
ENSCSEG00000003160	snupn	89	75.862	ENSHCOG00000007262	snupn	99	76.127	Hippocampus_comes
ENSCSEG00000003160	snupn	85	75.140	ENSIPUG00000014460	Snupn	98	75.140	Ictalurus_punctatus
ENSCSEG00000003160	snupn	86	60.274	ENSSTOG00000005904	SNUPN	98	61.749	Ictidomys_tridecemlineatus
ENSCSEG00000003160	snupn	89	72.386	ENSKMAG00000009957	snupn	100	73.190	Kryptolebias_marmoratus
ENSCSEG00000003160	snupn	89	80.423	ENSLBEG00000020694	snupn	100	81.217	Labrus_bergylta
ENSCSEG00000003160	snupn	85	60.278	ENSLACG00000015801	SNUPN	97	61.983	Latimeria_chalumnae
ENSCSEG00000003160	snupn	84	75.424	ENSLOCG00000015064	snupn	95	75.424	Lepisosteus_oculatus
ENSCSEG00000003160	snupn	84	61.345	ENSLAFG00000004422	SNUPN	95	62.011	Loxodonta_africana
ENSCSEG00000003160	snupn	57	71.831	ENSMFAG00000003706	SNUPN	94	61.143	Macaca_fascicularis
ENSCSEG00000003160	snupn	84	62.185	ENSMMUG00000004784	SNUPN	95	63.305	Macaca_mulatta
ENSCSEG00000003160	snupn	84	57.703	ENSMLEG00000041966	SNUPN	95	57.703	Mandrillus_leucophaeus
ENSCSEG00000003160	snupn	89	83.110	ENSMAMG00000023109	snupn	100	83.110	Mastacembelus_armatus
ENSCSEG00000003160	snupn	89	80.965	ENSMZEG00005010806	snupn	100	80.965	Maylandia_zebra
ENSCSEG00000003160	snupn	84	61.905	ENSMAUG00000020426	Snupn	96	63.025	Mesocricetus_auratus
ENSCSEG00000003160	snupn	84	61.905	ENSMICG00000016438	SNUPN	95	63.202	Microcebus_murinus
ENSCSEG00000003160	snupn	84	63.305	ENSMOCG00000014238	Snupn	96	63.305	Microtus_ochrogaster
ENSCSEG00000003160	snupn	89	81.283	ENSMMOG00000001321	snupn	100	81.283	Mola_mola
ENSCSEG00000003160	snupn	86	62.162	ENSMODG00000008852	SNUPN	97	62.162	Monodelphis_domestica
ENSCSEG00000003160	snupn	89	79.625	ENSMALG00000015058	snupn	100	79.625	Monopterus_albus
ENSCSEG00000003160	snupn	84	62.465	MGP_CAROLIEiJ_G0032259	Snupn	96	63.305	Mus_caroli
ENSCSEG00000003160	snupn	84	62.185	ENSMUSG00000055334	Snupn	96	63.025	Mus_musculus
ENSCSEG00000003160	snupn	84	62.465	MGP_PahariEiJ_G0015126	Snupn	96	63.305	Mus_pahari
ENSCSEG00000003160	snupn	84	62.185	MGP_SPRETEiJ_G0033399	Snupn	96	63.025	Mus_spretus
ENSCSEG00000003160	snupn	85	61.560	ENSMPUG00000017324	SNUPN	96	62.500	Mustela_putorius_furo
ENSCSEG00000003160	snupn	84	57.703	ENSMLUG00000027485	-	95	58.543	Myotis_lucifugus
ENSCSEG00000003160	snupn	84	61.173	ENSMLUG00000027517	-	95	61.732	Myotis_lucifugus
ENSCSEG00000003160	snupn	84	52.925	ENSMLUG00000000038	-	99	53.482	Myotis_lucifugus
ENSCSEG00000003160	snupn	84	61.905	ENSNGAG00000018735	Snupn	95	62.465	Nannospalax_galili
ENSCSEG00000003160	snupn	89	82.038	ENSNBRG00000017919	snupn	100	82.038	Neolamprologus_brichardi
ENSCSEG00000003160	snupn	56	69.231	ENSNLEG00000035240	-	77	69.231	Nomascus_leucogenys
ENSCSEG00000003160	snupn	84	51.124	ENSOPRG00000015889	-	95	52.247	Ochotona_princeps
ENSCSEG00000003160	snupn	78	52.553	ENSODEG00000014491	SNUPN	94	52.695	Octodon_degus
ENSCSEG00000003160	snupn	87	82.369	ENSONIG00000012855	snupn	99	82.369	Oreochromis_niloticus
ENSCSEG00000003160	snupn	84	62.360	ENSOCUG00000008801	SNUPN	95	62.360	Oryctolagus_cuniculus
ENSCSEG00000003160	snupn	90	80.800	ENSORLG00000001836	snupn	100	80.697	Oryzias_latipes
ENSCSEG00000003160	snupn	89	79.357	ENSORLG00020021175	snupn	100	79.357	Oryzias_latipes_hni
ENSCSEG00000003160	snupn	90	79.101	ENSORLG00015014444	snupn	99	79.893	Oryzias_latipes_hsok
ENSCSEG00000003160	snupn	91	79.211	ENSOMEG00000004853	snupn	100	79.625	Oryzias_melastigma
ENSCSEG00000003160	snupn	86	59.836	ENSOGAG00000004915	SNUPN	98	61.308	Otolemur_garnettii
ENSCSEG00000003160	snupn	84	61.453	ENSOARG00000001991	SNUPN	92	62.291	Ovis_aries
ENSCSEG00000003160	snupn	86	61.580	ENSPPAG00000034351	SNUPN	98	62.398	Pan_paniscus
ENSCSEG00000003160	snupn	84	61.236	ENSPPRG00000023192	SNUPN	95	61.905	Panthera_pardus
ENSCSEG00000003160	snupn	84	61.236	ENSPTIG00000003528	SNUPN	95	61.905	Panthera_tigris_altaica
ENSCSEG00000003160	snupn	86	61.580	ENSPTRG00000007302	SNUPN	98	62.398	Pan_troglodytes
ENSCSEG00000003160	snupn	84	54.622	ENSPANG00000034514	SNUPN	95	55.742	Papio_anubis
ENSCSEG00000003160	snupn	84	72.159	ENSPKIG00000012444	snupn	96	73.938	Paramormyrops_kingsleyae
ENSCSEG00000003160	snupn	84	63.333	ENSPSIG00000015229	SNUPN	95	63.333	Pelodiscus_sinensis
ENSCSEG00000003160	snupn	84	74.366	ENSPMGG00000023843	snupn	94	74.366	Periophthalmus_magnuspinnatus
ENSCSEG00000003160	snupn	84	62.745	ENSPCIG00000007854	SNUPN	95	62.745	Phascolarctos_cinereus
ENSCSEG00000003160	snupn	90	80.267	ENSPFOG00000014221	snupn	99	80.800	Poecilia_formosa
ENSCSEG00000003160	snupn	90	79.467	ENSPLAG00000002339	snupn	99	80.533	Poecilia_latipinna
ENSCSEG00000003160	snupn	90	80.000	ENSPMEG00000012436	snupn	99	80.533	Poecilia_mexicana
ENSCSEG00000003160	snupn	90	79.200	ENSPREG00000012683	snupn	99	80.000	Poecilia_reticulata
ENSCSEG00000003160	snupn	86	54.223	ENSPPYG00000006663	SNUPN	98	55.041	Pongo_abelii
ENSCSEG00000003160	snupn	84	61.064	ENSPCOG00000025482	SNUPN	95	62.360	Propithecus_coquereli
ENSCSEG00000003160	snupn	83	60.393	ENSPVAG00000010035	SNUPN	96	60.111	Pteropus_vampyrus
ENSCSEG00000003160	snupn	89	81.233	ENSPNYG00000008752	snupn	100	81.233	Pundamilia_nyererei
ENSCSEG00000003160	snupn	84	75.214	ENSPNAG00000026875	snupn	96	75.214	Pygocentrus_nattereri
ENSCSEG00000003160	snupn	84	62.185	ENSRNOG00000005426	Snupn	96	63.764	Rattus_norvegicus
ENSCSEG00000003160	snupn	84	62.185	ENSRBIG00000038665	SNUPN	95	63.305	Rhinopithecus_bieti
ENSCSEG00000003160	snupn	84	62.185	ENSRROG00000043625	SNUPN	95	63.305	Rhinopithecus_roxellana
ENSCSEG00000003160	snupn	84	63.173	ENSSBOG00000029086	-	95	64.306	Saimiri_boliviensis_boliviensis
ENSCSEG00000003160	snupn	80	74.251	ENSSFOG00015022264	snupn	66	74.251	Scleropages_formosus
ENSCSEG00000003160	snupn	89	83.690	ENSSMAG00000005485	snupn	99	83.602	Scophthalmus_maximus
ENSCSEG00000003160	snupn	89	83.646	ENSSDUG00000023461	snupn	100	83.646	Seriola_dumerili
ENSCSEG00000003160	snupn	89	83.378	ENSSLDG00000001425	snupn	100	83.378	Seriola_lalandi_dorsalis
ENSCSEG00000003160	snupn	84	50.980	ENSSARG00000005585	SNUPN	95	52.793	Sorex_araneus
ENSCSEG00000003160	snupn	84	61.944	ENSSPUG00000014331	SNUPN	95	63.611	Sphenodon_punctatus
ENSCSEG00000003160	snupn	89	83.378	ENSSPAG00000001216	snupn	100	83.378	Stegastes_partitus
ENSCSEG00000003160	snupn	84	61.732	ENSSSCG00000001877	SNUPN	95	62.570	Sus_scrofa
ENSCSEG00000003160	snupn	89	80.481	ENSTRUG00000016085	snupn	99	80.481	Takifugu_rubripes
ENSCSEG00000003160	snupn	83	67.416	ENSTNIG00000008456	snupn	100	67.416	Tetraodon_nigroviridis
ENSCSEG00000003160	snupn	84	62.291	ENSTBEG00000002434	SNUPN	95	62.291	Tupaia_belangeri
ENSCSEG00000003160	snupn	84	55.866	ENSTTRG00000011484	SNUPN	95	56.583	Tursiops_truncatus
ENSCSEG00000003160	snupn	84	62.079	ENSUAMG00000022723	SNUPN	95	62.745	Ursus_americanus
ENSCSEG00000003160	snupn	84	62.360	ENSUMAG00000003738	SNUPN	95	63.025	Ursus_maritimus
ENSCSEG00000003160	snupn	84	61.299	ENSVVUG00000019574	SNUPN	95	61.864	Vulpes_vulpes
ENSCSEG00000003160	snupn	83	63.533	ENSXETG00000015280	snupn	99	63.818	Xenopus_tropicalis
ENSCSEG00000003160	snupn	89	80.161	ENSXMAG00000006634	snupn	100	80.697	Xiphophorus_maculatus