EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000003216 (Gene tree)
Gene ID: 103387080
Gene Symbol: sf3b5
Alias: Splicing factor 3B subunit 10|si:ch211-8a9.5|zgc:92874
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 261 bases
Position: chr12:4351133-4351393
Accession: 103387080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000004966	SF3b10	PF07189.11	7.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005022	-	261	XM_008321585	ENSCSEP00000004966	86 (aa)	XP_008319807	UPI0004959B01

Gene Model

Click here to download ENSCSEG00000003216's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003216	sf3b5	100	91.860	ENSG00000169976	SF3B5	100	91.860	Homo_sapiens
ENSCSEG00000003216	sf3b5	100	97.674	ENSAPOG00000001721	sf3b5	100	97.674	Acanthochromis_polyacanthus
ENSCSEG00000003216	sf3b5	100	97.674	ENSACIG00000008106	sf3b5	100	97.674	Amphilophus_citrinellus
ENSCSEG00000003216	sf3b5	100	97.674	ENSAOCG00000023367	sf3b5	100	97.674	Amphiprion_ocellaris
ENSCSEG00000003216	sf3b5	100	97.674	ENSAPEG00000004605	sf3b5	100	97.674	Amphiprion_percula
ENSCSEG00000003216	sf3b5	100	98.837	ENSATEG00000009720	sf3b5	100	98.837	Anabas_testudineus
ENSCSEG00000003216	sf3b5	100	93.023	ENSACAG00000007948	SF3B5	100	93.023	Anolis_carolinensis
ENSCSEG00000003216	sf3b5	100	91.860	ENSANAG00000019999	SF3B5	100	91.860	Aotus_nancymaae
ENSCSEG00000003216	sf3b5	100	97.674	ENSACLG00000022410	sf3b5	100	97.674	Astatotilapia_calliptera
ENSCSEG00000003216	sf3b5	100	91.860	ENSBTAG00000009795	SF3B5	100	91.860	Bos_taurus
ENSCSEG00000003216	sf3b5	100	91.860	ENSCJAG00000046566	SF3B5	100	91.860	Callithrix_jacchus
ENSCSEG00000003216	sf3b5	100	91.860	ENSCAFG00000032495	SF3B5	100	91.860	Canis_familiaris
ENSCSEG00000003216	sf3b5	100	91.860	ENSCAFG00020000873	SF3B5	100	91.860	Canis_lupus_dingo
ENSCSEG00000003216	sf3b5	100	91.860	ENSCHIG00000007987	SF3B5	100	91.860	Capra_hircus
ENSCSEG00000003216	sf3b5	100	91.860	ENSTSYG00000012236	SF3B5	100	91.860	Carlito_syrichta
ENSCSEG00000003216	sf3b5	100	91.860	ENSCPOG00000012435	SF3B5	100	91.860	Cavia_porcellus
ENSCSEG00000003216	sf3b5	100	91.860	ENSCCAG00000006528	SF3B5	100	91.860	Cebus_capucinus
ENSCSEG00000003216	sf3b5	100	91.860	ENSCATG00000010192	SF3B5	100	91.860	Cercocebus_atys
ENSCSEG00000003216	sf3b5	100	91.860	ENSCLAG00000017802	SF3B5	100	91.860	Chinchilla_lanigera
ENSCSEG00000003216	sf3b5	100	91.860	ENSCSAG00000000187	SF3B5	100	91.860	Chlorocebus_sabaeus
ENSCSEG00000003216	sf3b5	100	93.023	ENSCPBG00000017148	SF3B5	100	93.023	Chrysemys_picta_bellii
ENSCSEG00000003216	sf3b5	98	72.619	ENSCING00000021953	-	98	72.619	Ciona_intestinalis
ENSCSEG00000003216	sf3b5	100	91.860	ENSCANG00000002639	SF3B5	100	91.860	Colobus_angolensis_palliatus
ENSCSEG00000003216	sf3b5	100	90.698	ENSCGRG00001007249	Sf3b5	100	90.698	Cricetulus_griseus_chok1gshd
ENSCSEG00000003216	sf3b5	100	90.698	ENSCGRG00000019185	Sf3b5	100	90.698	Cricetulus_griseus_crigri
ENSCSEG00000003216	sf3b5	100	98.837	ENSCVAG00000005040	sf3b5	100	98.837	Cyprinodon_variegatus
ENSCSEG00000003216	sf3b5	100	94.186	ENSDARG00000016855	sf3b5	100	94.186	Danio_rerio
ENSCSEG00000003216	sf3b5	100	91.860	ENSDNOG00000048829	SF3B5	82	91.860	Dasypus_novemcinctus
ENSCSEG00000003216	sf3b5	100	91.860	ENSDORG00000005838	Sf3b5	100	91.860	Dipodomys_ordii
ENSCSEG00000003216	sf3b5	99	81.176	FBgn0040534	Sf3b5	100	81.176	Drosophila_melanogaster
ENSCSEG00000003216	sf3b5	100	91.860	ENSETEG00000004047	SF3B5	100	91.860	Echinops_telfairi
ENSCSEG00000003216	sf3b5	99	82.353	ENSEBUG00000002311	sf3b5	100	82.353	Eptatretus_burgeri
ENSCSEG00000003216	sf3b5	100	91.860	ENSEASG00005009522	SF3B5	100	91.860	Equus_asinus_asinus
ENSCSEG00000003216	sf3b5	100	91.860	ENSECAG00000005457	SF3B5	100	91.860	Equus_caballus
ENSCSEG00000003216	sf3b5	100	97.674	ENSELUG00000014290	SF3B5	100	97.674	Esox_lucius
ENSCSEG00000003216	sf3b5	100	91.860	ENSFCAG00000000936	SF3B5	100	91.860	Felis_catus
ENSCSEG00000003216	sf3b5	100	91.860	ENSFALG00000015012	SF3B5	100	91.860	Ficedula_albicollis
ENSCSEG00000003216	sf3b5	100	91.860	ENSFDAG00000003664	SF3B5	100	91.860	Fukomys_damarensis
ENSCSEG00000003216	sf3b5	100	98.837	ENSFHEG00000020301	sf3b5	100	98.837	Fundulus_heteroclitus
ENSCSEG00000003216	sf3b5	100	96.512	ENSGMOG00000019972	sf3b5	100	96.512	Gadus_morhua
ENSCSEG00000003216	sf3b5	100	94.186	ENSGALG00000030824	SF3B5	100	94.186	Gallus_gallus
ENSCSEG00000003216	sf3b5	100	98.837	ENSGAFG00000000271	sf3b5	100	98.837	Gambusia_affinis
ENSCSEG00000003216	sf3b5	100	98.837	ENSGACG00000010363	sf3b5	100	98.837	Gasterosteus_aculeatus
ENSCSEG00000003216	sf3b5	100	93.023	ENSGAGG00000011434	SF3B5	100	93.023	Gopherus_agassizii
ENSCSEG00000003216	sf3b5	100	88.372	ENSGAGG00000000646	-	100	88.372	Gopherus_agassizii
ENSCSEG00000003216	sf3b5	100	91.860	ENSGGOG00000001537	SF3B5	100	91.860	Gorilla_gorilla
ENSCSEG00000003216	sf3b5	100	97.674	ENSHBUG00000008925	sf3b5	100	97.674	Haplochromis_burtoni
ENSCSEG00000003216	sf3b5	100	91.860	ENSHGLG00000021406	SF3B5	100	91.860	Heterocephalus_glaber_female
ENSCSEG00000003216	sf3b5	100	91.860	ENSHGLG00100020370	SF3B5	100	91.860	Heterocephalus_glaber_male
ENSCSEG00000003216	sf3b5	100	97.674	ENSHCOG00000016806	sf3b5	100	97.674	Hippocampus_comes
ENSCSEG00000003216	sf3b5	100	97.674	ENSHCOG00000016802	sf3b5	100	97.674	Hippocampus_comes
ENSCSEG00000003216	sf3b5	100	97.674	ENSHCOG00000009115	-	100	97.674	Hippocampus_comes
ENSCSEG00000003216	sf3b5	100	96.512	ENSIPUG00000015166	sf3b5	100	96.512	Ictalurus_punctatus
ENSCSEG00000003216	sf3b5	100	91.860	ENSSTOG00000003347	SF3B5	100	91.860	Ictidomys_tridecemlineatus
ENSCSEG00000003216	sf3b5	100	91.860	ENSJJAG00000001857	Sf3b5	100	91.860	Jaculus_jaculus
ENSCSEG00000003216	sf3b5	100	98.837	ENSKMAG00000002249	sf3b5	100	98.837	Kryptolebias_marmoratus
ENSCSEG00000003216	sf3b5	100	98.837	ENSLBEG00000019847	sf3b5	100	98.837	Labrus_bergylta
ENSCSEG00000003216	sf3b5	100	93.023	ENSLACG00000000946	SF3B5	100	93.023	Latimeria_chalumnae
ENSCSEG00000003216	sf3b5	100	97.674	ENSLOCG00000017352	sf3b5	100	97.674	Lepisosteus_oculatus
ENSCSEG00000003216	sf3b5	100	91.860	ENSLAFG00000032489	SF3B5	100	91.860	Loxodonta_africana
ENSCSEG00000003216	sf3b5	100	91.860	ENSMFAG00000029753	SF3B5	100	91.860	Macaca_fascicularis
ENSCSEG00000003216	sf3b5	100	91.860	ENSMMUG00000047691	SF3B5	100	91.860	Macaca_mulatta
ENSCSEG00000003216	sf3b5	100	91.860	ENSMNEG00000028236	SF3B5	100	91.860	Macaca_nemestrina
ENSCSEG00000003216	sf3b5	100	91.860	ENSMLEG00000007622	SF3B5	100	91.860	Mandrillus_leucophaeus
ENSCSEG00000003216	sf3b5	100	97.674	ENSMAMG00000021639	sf3b5	100	97.674	Mastacembelus_armatus
ENSCSEG00000003216	sf3b5	100	86.047	ENSMZEG00005027407	sf3b5	100	86.047	Maylandia_zebra
ENSCSEG00000003216	sf3b5	100	97.674	ENSMZEG00005027408	sf3b5	100	97.674	Maylandia_zebra
ENSCSEG00000003216	sf3b5	100	97.674	ENSMZEG00005028115	SF3B5	100	97.674	Maylandia_zebra
ENSCSEG00000003216	sf3b5	100	94.186	ENSMGAG00000015849	SF3B5	100	94.186	Meleagris_gallopavo
ENSCSEG00000003216	sf3b5	100	90.698	ENSMAUG00000008283	Sf3b5	100	90.698	Mesocricetus_auratus
ENSCSEG00000003216	sf3b5	100	91.860	ENSMICG00000014922	SF3B5	100	91.860	Microcebus_murinus
ENSCSEG00000003216	sf3b5	100	90.698	ENSMOCG00000001713	Sf3b5	100	90.698	Microtus_ochrogaster
ENSCSEG00000003216	sf3b5	100	97.674	ENSMMOG00000007956	sf3b5	100	97.674	Mola_mola
ENSCSEG00000003216	sf3b5	100	91.860	ENSMODG00000023291	SF3B5	83	91.860	Monodelphis_domestica
ENSCSEG00000003216	sf3b5	91	96.296	ENSMALG00000020357	sf3b5	99	96.296	Monopterus_albus
ENSCSEG00000003216	sf3b5	100	90.698	MGP_CAROLIEiJ_G0015120	Sf3b5	100	90.698	Mus_caroli
ENSCSEG00000003216	sf3b5	100	90.698	ENSMUSG00000078348	Sf3b5	100	90.698	Mus_musculus
ENSCSEG00000003216	sf3b5	100	90.698	MGP_PahariEiJ_G0023739	Sf3b5	100	90.698	Mus_pahari
ENSCSEG00000003216	sf3b5	100	90.698	MGP_SPRETEiJ_G0015928	Sf3b5	100	90.698	Mus_spretus
ENSCSEG00000003216	sf3b5	100	91.860	ENSMPUG00000018379	SF3B5	100	91.860	Mustela_putorius_furo
ENSCSEG00000003216	sf3b5	93	93.750	ENSMLUG00000025546	-	93	93.750	Myotis_lucifugus
ENSCSEG00000003216	sf3b5	100	91.860	ENSMLUG00000028504	-	100	91.860	Myotis_lucifugus
ENSCSEG00000003216	sf3b5	100	89.535	ENSMLUG00000010802	-	100	89.535	Myotis_lucifugus
ENSCSEG00000003216	sf3b5	100	91.860	ENSNGAG00000010732	Sf3b5	100	91.860	Nannospalax_galili
ENSCSEG00000003216	sf3b5	100	97.674	ENSNBRG00000014383	sf3b5	100	97.674	Neolamprologus_brichardi
ENSCSEG00000003216	sf3b5	100	91.860	ENSNLEG00000019307	SF3B5	100	91.860	Nomascus_leucogenys
ENSCSEG00000003216	sf3b5	100	91.860	ENSMEUG00000005445	-	100	91.860	Notamacropus_eugenii
ENSCSEG00000003216	sf3b5	100	91.860	ENSMEUG00000005440	-	100	91.860	Notamacropus_eugenii
ENSCSEG00000003216	sf3b5	100	93.023	ENSOPRG00000015107	SF3B5	100	93.023	Ochotona_princeps
ENSCSEG00000003216	sf3b5	100	91.860	ENSODEG00000019507	SF3B5	100	91.860	Octodon_degus
ENSCSEG00000003216	sf3b5	100	97.674	ENSONIG00000020725	sf3b5	100	97.674	Oreochromis_niloticus
ENSCSEG00000003216	sf3b5	69	91.525	ENSOANG00000015301	SF3B5	97	91.525	Ornithorhynchus_anatinus
ENSCSEG00000003216	sf3b5	100	91.860	ENSOCUG00000008752	SF3B5	100	91.860	Oryctolagus_cuniculus
ENSCSEG00000003216	sf3b5	100	96.512	ENSORLG00000004925	sf3b5	100	96.512	Oryzias_latipes
ENSCSEG00000003216	sf3b5	100	96.512	ENSORLG00020011625	sf3b5	100	96.512	Oryzias_latipes_hni
ENSCSEG00000003216	sf3b5	100	96.512	ENSORLG00015017061	sf3b5	100	96.512	Oryzias_latipes_hsok
ENSCSEG00000003216	sf3b5	100	96.512	ENSOMEG00000010620	sf3b5	100	96.512	Oryzias_melastigma
ENSCSEG00000003216	sf3b5	100	91.860	ENSOGAG00000012152	SF3B5	100	91.860	Otolemur_garnettii
ENSCSEG00000003216	sf3b5	100	88.372	ENSOARG00000002617	SF3B5	100	88.372	Ovis_aries
ENSCSEG00000003216	sf3b5	92	93.671	ENSOARG00000019486	-	95	93.671	Ovis_aries
ENSCSEG00000003216	sf3b5	100	91.860	ENSPPAG00000012940	SF3B5	100	91.860	Pan_paniscus
ENSCSEG00000003216	sf3b5	100	91.860	ENSPPRG00000021262	SF3B5	100	91.860	Panthera_pardus
ENSCSEG00000003216	sf3b5	100	91.860	ENSPTIG00000001952	SF3B5	100	91.860	Panthera_tigris_altaica
ENSCSEG00000003216	sf3b5	100	91.860	ENSPTRG00000018676	SF3B5	100	91.860	Pan_troglodytes
ENSCSEG00000003216	sf3b5	100	91.860	ENSPANG00000034242	SF3B5	100	91.860	Papio_anubis
ENSCSEG00000003216	sf3b5	100	95.349	ENSPKIG00000006057	sf3b5	100	95.349	Paramormyrops_kingsleyae
ENSCSEG00000003216	sf3b5	100	93.023	ENSPSIG00000001262	SF3B5	100	93.023	Pelodiscus_sinensis
ENSCSEG00000003216	sf3b5	100	97.674	ENSPMGG00000014804	sf3b5	100	97.674	Periophthalmus_magnuspinnatus
ENSCSEG00000003216	sf3b5	100	90.698	ENSPEMG00000012931	Sf3b5	100	90.698	Peromyscus_maniculatus_bairdii
ENSCSEG00000003216	sf3b5	100	87.209	ENSPMAG00000010296	sf3b5	100	87.209	Petromyzon_marinus
ENSCSEG00000003216	sf3b5	93	95.000	ENSPCIG00000011344	-	78	95.000	Phascolarctos_cinereus
ENSCSEG00000003216	sf3b5	100	70.930	ENSPCIG00000025007	-	100	70.930	Phascolarctos_cinereus
ENSCSEG00000003216	sf3b5	100	98.837	ENSPFOG00000019994	sf3b5	100	98.837	Poecilia_formosa
ENSCSEG00000003216	sf3b5	100	98.837	ENSPLAG00000008412	sf3b5	100	98.837	Poecilia_latipinna
ENSCSEG00000003216	sf3b5	100	98.837	ENSPMEG00000020050	sf3b5	100	98.837	Poecilia_mexicana
ENSCSEG00000003216	sf3b5	100	98.837	ENSPREG00000009242	sf3b5	100	98.837	Poecilia_reticulata
ENSCSEG00000003216	sf3b5	100	91.860	ENSPPYG00000017068	SF3B5	100	91.860	Pongo_abelii
ENSCSEG00000003216	sf3b5	100	91.860	ENSPCAG00000009332	SF3B5	100	91.860	Procavia_capensis
ENSCSEG00000003216	sf3b5	100	91.860	ENSPCOG00000013754	SF3B5	100	91.860	Propithecus_coquereli
ENSCSEG00000003216	sf3b5	56	95.833	ENSPVAG00000002820	SF3B5	100	95.833	Pteropus_vampyrus
ENSCSEG00000003216	sf3b5	100	97.674	ENSPNYG00000002075	sf3b5	100	97.674	Pundamilia_nyererei
ENSCSEG00000003216	sf3b5	100	95.349	ENSPNAG00000004942	sf3b5	100	95.349	Pygocentrus_nattereri
ENSCSEG00000003216	sf3b5	100	90.698	ENSRNOG00000014908	Sf3b5	100	90.698	Rattus_norvegicus
ENSCSEG00000003216	sf3b5	100	91.860	ENSRBIG00000006301	SF3B5	100	91.860	Rhinopithecus_bieti
ENSCSEG00000003216	sf3b5	100	91.860	ENSRROG00000037067	SF3B5	100	91.860	Rhinopithecus_roxellana
ENSCSEG00000003216	sf3b5	100	91.860	ENSSBOG00000006122	SF3B5	100	91.860	Saimiri_boliviensis_boliviensis
ENSCSEG00000003216	sf3b5	100	90.698	ENSSHAG00000015670	SF3B5	100	90.698	Sarcophilus_harrisii
ENSCSEG00000003216	sf3b5	100	94.186	ENSSFOG00015015767	sf3b5	100	94.186	Scleropages_formosus
ENSCSEG00000003216	sf3b5	100	97.674	ENSSMAG00000018852	sf3b5	100	97.674	Scophthalmus_maximus
ENSCSEG00000003216	sf3b5	100	98.837	ENSSDUG00000018161	sf3b5	100	98.837	Seriola_dumerili
ENSCSEG00000003216	sf3b5	100	98.837	ENSSLDG00000014547	sf3b5	100	98.837	Seriola_lalandi_dorsalis
ENSCSEG00000003216	sf3b5	100	91.860	ENSSARG00000007820	SF3B5	100	91.860	Sorex_araneus
ENSCSEG00000003216	sf3b5	100	97.674	ENSSPAG00000017371	-	100	97.674	Stegastes_partitus
ENSCSEG00000003216	sf3b5	100	97.674	ENSSPAG00000009244	sf3b5	100	97.674	Stegastes_partitus
ENSCSEG00000003216	sf3b5	100	91.860	ENSSSCG00000035578	SF3B5	100	91.860	Sus_scrofa
ENSCSEG00000003216	sf3b5	100	94.186	ENSTGUG00000010810	SF3B5	100	94.186	Taeniopygia_guttata
ENSCSEG00000003216	sf3b5	100	98.837	ENSTRUG00000005577	sf3b5	100	98.837	Takifugu_rubripes
ENSCSEG00000003216	sf3b5	100	98.837	ENSTNIG00000001265	sf3b5	100	98.837	Tetraodon_nigroviridis
ENSCSEG00000003216	sf3b5	100	93.023	ENSTBEG00000003072	SF3B5	100	93.023	Tupaia_belangeri
ENSCSEG00000003216	sf3b5	100	91.860	ENSTTRG00000008817	SF3B5	100	91.860	Tursiops_truncatus
ENSCSEG00000003216	sf3b5	100	91.860	ENSUAMG00000027296	SF3B5	100	91.860	Ursus_americanus
ENSCSEG00000003216	sf3b5	100	91.860	ENSUMAG00000005448	SF3B5	100	91.860	Ursus_maritimus
ENSCSEG00000003216	sf3b5	100	91.860	ENSVPAG00000003826	SF3B5	100	91.860	Vicugna_pacos
ENSCSEG00000003216	sf3b5	100	91.860	ENSVVUG00000004703	SF3B5	100	91.860	Vulpes_vulpes
ENSCSEG00000003216	sf3b5	100	96.512	ENSXETG00000021409	sf3b5	100	96.512	Xenopus_tropicalis
ENSCSEG00000003216	sf3b5	100	98.837	ENSXMAG00000019971	sf3b5	100	98.837	Xiphophorus_maculatus