EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000003266 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein Musashi homolog 2-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 112856 bases
Position: chr4:2888976-3001831
Accession: 103377698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000005055	RRM_1	PF00076.22	4.2e-23	1	2
ENSCSEP00000005055	RRM_1	PF00076.22	4.2e-23	2	2
ENSCSEP00000005045	RRM_1	PF00076.22	1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005101	-	1249	-	ENSCSEP00000005045	237 (aa)	-	-
ENSCSET00000005111	-	960	XM_008308598	ENSCSEP00000005055	319 (aa)	XP_008306820	-

Gene Model

Click here to download ENSCSEG00000003266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000003266	-	54	40.441	ENSCSEG00000005613	HNRNPA3	94	31.228
ENSCSEG00000003266	-	70	31.792	ENSCSEG00000005274	tardbpl	51	33.121
ENSCSEG00000003266	-	58	88.321	ENSCSEG00000013549	msi2a	100	67.222
ENSCSEG00000003266	-	55	34.532	ENSCSEG00000003421	hnrnpa0b	60	33.508
ENSCSEG00000003266	-	69	46.032	ENSCSEG00000007589	hnrnpa1a	96	30.696
ENSCSEG00000003266	-	57	47.857	ENSCSEG00000010909	hnrnpd	63	44.068
ENSCSEG00000003266	-	93	60.092	ENSCSEG00000013557	msi2a	93	60.092
ENSCSEG00000003266	-	60	32.215	ENSCSEG00000014051	-	70	34.188
ENSCSEG00000003266	-	59	44.444	ENSCSEG00000010345	-	85	33.942
ENSCSEG00000003266	-	77	39.344	ENSCSEG00000011636	hnrnpaba	61	52.500
ENSCSEG00000003266	-	100	65.861	ENSCSEG00000008352	-	100	65.861
ENSCSEG00000003266	-	100	60.286	ENSCSEG00000005834	-	100	60.684
ENSCSEG00000003266	-	92	67.797	ENSCSEG00000011032	MSI1	100	67.797
ENSCSEG00000003266	-	74	34.231	ENSCSEG00000018162	dazap1	62	34.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003266	-	100	79.878	ENSG00000153944	MSI2	100	79.878	Homo_sapiens
ENSCSEG00000003266	-	100	81.173	ENSAPOG00000001658	msi2a	100	81.173	Acanthochromis_polyacanthus
ENSCSEG00000003266	-	92	78.730	ENSAMEG00000002697	MSI2	99	78.730	Ailuropoda_melanoleuca
ENSCSEG00000003266	-	100	62.887	ENSACIG00000009475	msi2a	100	62.887	Amphilophus_citrinellus
ENSCSEG00000003266	-	66	71.605	ENSAOCG00000014822	msi2a	66	79.856	Amphiprion_ocellaris
ENSCSEG00000003266	-	100	81.173	ENSAPEG00000007706	msi2a	100	81.173	Amphiprion_percula
ENSCSEG00000003266	-	91	87.050	ENSATEG00000003301	-	100	87.050	Anabas_testudineus
ENSCSEG00000003266	-	100	81.173	ENSATEG00000010498	msi2a	100	81.173	Anabas_testudineus
ENSCSEG00000003266	-	87	83.696	ENSACAG00000005452	MSI2	71	80.660	Anolis_carolinensis
ENSCSEG00000003266	-	100	79.878	ENSANAG00000037827	MSI2	100	79.878	Aotus_nancymaae
ENSCSEG00000003266	-	100	80.556	ENSACLG00000007752	msi2a	100	80.556	Astatotilapia_calliptera
ENSCSEG00000003266	-	100	81.459	ENSAMXG00000032796	msi2a	100	81.763	Astyanax_mexicanus
ENSCSEG00000003266	-	100	82.716	ENSAMXG00000010474	msi2b	97	85.859	Astyanax_mexicanus
ENSCSEG00000003266	-	92	83.838	ENSBTAG00000004406	MSI2	97	83.838	Bos_taurus
ENSCSEG00000003266	-	57	64.706	WBGene00003423	msi-1	78	50.806	Caenorhabditis_elegans
ENSCSEG00000003266	-	100	79.878	ENSCJAG00000013998	MSI2	100	79.878	Callithrix_jacchus
ENSCSEG00000003266	-	90	78.964	ENSCAFG00020025620	MSI2	80	79.299	Canis_lupus_dingo
ENSCSEG00000003266	-	96	80.892	ENSCHIG00000016580	MSI2	100	79.268	Capra_hircus
ENSCSEG00000003266	-	91	78.723	ENSCPOG00000034042	MSI2	99	78.723	Cavia_porcellus
ENSCSEG00000003266	-	100	79.878	ENSCCAG00000033927	MSI2	100	79.878	Cebus_capucinus
ENSCSEG00000003266	-	97	80.757	ENSCATG00000040879	MSI2	100	79.878	Cercocebus_atys
ENSCSEG00000003266	-	100	75.723	ENSCLAG00000014325	MSI2	100	75.723	Chinchilla_lanigera
ENSCSEG00000003266	-	100	79.878	ENSCSAG00000005633	MSI2	100	79.878	Chlorocebus_sabaeus
ENSCSEG00000003266	-	86	63.571	ENSCHOG00000008660	MSI2	100	63.571	Choloepus_hoffmanni
ENSCSEG00000003266	-	100	77.465	ENSCPBG00000009942	MSI2	95	78.277	Chrysemys_picta_bellii
ENSCSEG00000003266	-	51	68.041	ENSCING00000018579	-	97	44.395	Ciona_intestinalis
ENSCSEG00000003266	-	60	57.477	ENSCSAVG00000010397	-	92	47.195	Ciona_savignyi
ENSCSEG00000003266	-	91	81.778	ENSCANG00000036414	MSI2	100	78.730	Colobus_angolensis_palliatus
ENSCSEG00000003266	-	100	79.331	ENSCGRG00001013330	Msi2	100	79.331	Cricetulus_griseus_chok1gshd
ENSCSEG00000003266	-	92	78.481	ENSCGRG00000003141	Msi2	100	78.481	Cricetulus_griseus_crigri
ENSCSEG00000003266	-	96	80.064	ENSCVAG00000017075	msi2a	99	80.064	Cyprinodon_variegatus
ENSCSEG00000003266	-	100	64.948	ENSDARG00000033901	msi2a	100	62.468	Danio_rerio
ENSCSEG00000003266	-	96	83.267	ENSDARG00000032614	msi2b	100	93.023	Danio_rerio
ENSCSEG00000003266	-	91	83.681	ENSDNOG00000014501	MSI2	100	83.681	Dasypus_novemcinctus
ENSCSEG00000003266	-	75	76.111	ENSDORG00000005394	Msi2	84	76.111	Dipodomys_ordii
ENSCSEG00000003266	-	97	48.045	FBgn0260943	Rbp6	100	45.076	Drosophila_melanogaster
ENSCSEG00000003266	-	65	63.816	ENSETEG00000012450	-	64	63.816	Echinops_telfairi
ENSCSEG00000003266	-	89	62.215	ENSEBUG00000006732	msi2a	87	62.215	Eptatretus_burgeri
ENSCSEG00000003266	-	90	81.271	ENSEASG00005002965	MSI2	97	72.647	Equus_asinus_asinus
ENSCSEG00000003266	-	100	73.729	ENSECAG00000011435	MSI2	100	73.729	Equus_caballus
ENSCSEG00000003266	-	83	65.900	ENSEEUG00000007810	MSI2	100	65.900	Erinaceus_europaeus
ENSCSEG00000003266	-	100	77.168	ENSELUG00000001361	msi2b	99	81.752	Esox_lucius
ENSCSEG00000003266	-	100	81.173	ENSELUG00000011747	msi2a	100	81.173	Esox_lucius
ENSCSEG00000003266	-	100	79.878	ENSFCAG00000041686	MSI2	100	79.878	Felis_catus
ENSCSEG00000003266	-	57	73.529	ENSFCAG00000033787	-	83	66.019	Felis_catus
ENSCSEG00000003266	-	92	78.730	ENSFDAG00000016118	MSI2	100	78.730	Fukomys_damarensis
ENSCSEG00000003266	-	100	80.556	ENSFHEG00000000084	msi2a	96	90.441	Fundulus_heteroclitus
ENSCSEG00000003266	-	54	77.885	ENSGMOG00000007596	-	100	88.462	Gadus_morhua
ENSCSEG00000003266	-	100	77.168	ENSGALG00000005567	MSI2	100	77.168	Gallus_gallus
ENSCSEG00000003266	-	96	72.785	ENSGAFG00000006974	msi2a	90	90.441	Gambusia_affinis
ENSCSEG00000003266	-	100	79.623	ENSGAGG00000016542	MSI2	100	76.645	Gopherus_agassizii
ENSCSEG00000003266	-	91	81.778	ENSGGOG00000013182	MSI2	100	78.730	Gorilla_gorilla
ENSCSEG00000003266	-	100	80.556	ENSHBUG00000020800	msi2a	100	80.556	Haplochromis_burtoni
ENSCSEG00000003266	-	100	68.622	ENSHGLG00000012444	MSI2	100	68.622	Heterocephalus_glaber_female
ENSCSEG00000003266	-	73	78.462	ENSHGLG00100003744	MSI2	100	78.462	Heterocephalus_glaber_male
ENSCSEG00000003266	-	97	81.275	ENSHCOG00000000266	msi2a	97	73.964	Hippocampus_comes
ENSCSEG00000003266	-	94	76.923	ENSHCOG00000017241	-	75	76.923	Hippocampus_comes
ENSCSEG00000003266	-	100	79.012	ENSIPUG00000003732	msi2b	100	79.012	Ictalurus_punctatus
ENSCSEG00000003266	-	100	80.247	ENSIPUG00000021097	msi2a	100	80.864	Ictalurus_punctatus
ENSCSEG00000003266	-	91	78.723	ENSSTOG00000007884	MSI2	99	78.723	Ictidomys_tridecemlineatus
ENSCSEG00000003266	-	73	75.401	ENSJJAG00000006292	-	100	75.401	Jaculus_jaculus
ENSCSEG00000003266	-	96	79.365	ENSKMAG00000009494	msi2a	96	79.365	Kryptolebias_marmoratus
ENSCSEG00000003266	-	100	81.173	ENSLBEG00000007061	msi2a	100	81.173	Labrus_bergylta
ENSCSEG00000003266	-	92	78.505	ENSLBEG00000026223	-	100	78.505	Labrus_bergylta
ENSCSEG00000003266	-	100	65.116	ENSLOCG00000004675	msi2b	100	81.301	Lepisosteus_oculatus
ENSCSEG00000003266	-	91	81.778	ENSMFAG00000003775	MSI2	100	78.730	Macaca_fascicularis
ENSCSEG00000003266	-	91	81.778	ENSMMUG00000002069	MSI2	100	78.730	Macaca_mulatta
ENSCSEG00000003266	-	100	79.878	ENSMNEG00000045275	MSI2	100	79.878	Macaca_nemestrina
ENSCSEG00000003266	-	91	81.778	ENSMLEG00000033888	MSI2	100	78.730	Mandrillus_leucophaeus
ENSCSEG00000003266	-	100	80.615	ENSMAMG00000010503	msi2a	100	80.923	Mastacembelus_armatus
ENSCSEG00000003266	-	96	87.692	ENSMAMG00000002488	-	99	92.647	Mastacembelus_armatus
ENSCSEG00000003266	-	100	80.793	ENSMZEG00005007676	msi2a	100	80.793	Maylandia_zebra
ENSCSEG00000003266	-	100	75.216	ENSMAUG00000003862	Msi2	100	75.216	Mesocricetus_auratus
ENSCSEG00000003266	-	100	61.562	ENSMICG00000032913	-	100	63.363	Microcebus_murinus
ENSCSEG00000003266	-	100	79.878	ENSMICG00000013598	-	100	79.878	Microcebus_murinus
ENSCSEG00000003266	-	100	75.434	ENSMOCG00000005820	Msi2	100	75.434	Microtus_ochrogaster
ENSCSEG00000003266	-	96	67.416	ENSMMOG00000008348	msi2a	91	75.325	Mola_mola
ENSCSEG00000003266	-	85	78.974	ENSMODG00000014790	MSI2	100	78.974	Monodelphis_domestica
ENSCSEG00000003266	-	97	81.673	ENSMALG00000000071	msi2a	99	77.778	Monopterus_albus
ENSCSEG00000003266	-	100	79.573	MGP_CAROLIEiJ_G0016948	Msi2	100	92.920	Mus_caroli
ENSCSEG00000003266	-	100	79.573	ENSMUSG00000069769	Msi2	100	92.920	Mus_musculus
ENSCSEG00000003266	-	100	79.573	MGP_PahariEiJ_G0018079	Msi2	100	92.920	Mus_pahari
ENSCSEG00000003266	-	100	79.573	MGP_SPRETEiJ_G0017795	Msi2	100	92.920	Mus_spretus
ENSCSEG00000003266	-	92	83.502	ENSMPUG00000015377	MSI2	97	83.502	Mustela_putorius_furo
ENSCSEG00000003266	-	92	83.502	ENSMLUG00000007865	MSI2	97	83.502	Myotis_lucifugus
ENSCSEG00000003266	-	100	75.434	ENSNGAG00000017807	Msi2	100	75.434	Nannospalax_galili
ENSCSEG00000003266	-	100	80.556	ENSNBRG00000014596	msi2a	92	90.441	Neolamprologus_brichardi
ENSCSEG00000003266	-	91	81.778	ENSNLEG00000008059	MSI2	95	84.689	Nomascus_leucogenys
ENSCSEG00000003266	-	64	73.684	ENSOPRG00000000872	-	64	73.684	Ochotona_princeps
ENSCSEG00000003266	-	100	75.723	ENSODEG00000011974	MSI2	100	75.723	Octodon_degus
ENSCSEG00000003266	-	57	90.441	ENSONIG00000001972	msi2a	76	90.441	Oreochromis_niloticus
ENSCSEG00000003266	-	86	85.915	ENSOANG00000005667	MSI2	72	84.322	Ornithorhynchus_anatinus
ENSCSEG00000003266	-	92	83.502	ENSOCUG00000010440	MSI2	97	83.502	Oryctolagus_cuniculus
ENSCSEG00000003266	-	100	79.012	ENSORLG00000009671	msi2a	100	79.012	Oryzias_latipes
ENSCSEG00000003266	-	100	79.012	ENSORLG00020021556	msi2a	100	79.012	Oryzias_latipes_hni
ENSCSEG00000003266	-	100	79.012	ENSORLG00015004592	msi2a	100	79.012	Oryzias_latipes_hsok
ENSCSEG00000003266	-	100	75.915	ENSOMEG00000000146	msi2a	97	84.797	Oryzias_melastigma
ENSCSEG00000003266	-	92	84.459	ENSOGAG00000005621	MSI2	99	84.459	Otolemur_garnettii
ENSCSEG00000003266	-	92	78.730	ENSPPAG00000037697	MSI2	100	78.730	Pan_paniscus
ENSCSEG00000003266	-	92	83.502	ENSPPRG00000001848	MSI2	94	83.502	Panthera_pardus
ENSCSEG00000003266	-	71	68.534	ENSPTIG00000021873	-	89	68.534	Panthera_tigris_altaica
ENSCSEG00000003266	-	91	79.100	ENSPTIG00000021678	MSI2	96	79.100	Panthera_tigris_altaica
ENSCSEG00000003266	-	91	81.778	ENSPTRG00000009437	MSI2	100	78.730	Pan_troglodytes
ENSCSEG00000003266	-	100	79.878	ENSPANG00000022319	MSI2	100	79.878	Papio_anubis
ENSCSEG00000003266	-	96	77.389	ENSPKIG00000007038	-	96	75.152	Paramormyrops_kingsleyae
ENSCSEG00000003266	-	100	81.818	ENSPSIG00000008618	MSI2	83	81.818	Pelodiscus_sinensis
ENSCSEG00000003266	-	100	80.556	ENSPMGG00000005888	msi2a	100	80.556	Periophthalmus_magnuspinnatus
ENSCSEG00000003266	-	100	75.141	ENSPCIG00000006063	MSI2	100	75.141	Phascolarctos_cinereus
ENSCSEG00000003266	-	55	77.143	ENSPFOG00000019337	MSI2	91	87.619	Poecilia_formosa
ENSCSEG00000003266	-	66	80.769	ENSPLAG00000000436	msi2a	73	90.511	Poecilia_latipinna
ENSCSEG00000003266	-	59	77.857	ENSPMEG00000013247	msi2a	78	80.147	Poecilia_mexicana
ENSCSEG00000003266	-	97	81.673	ENSPREG00000000881	msi2a	99	78.704	Poecilia_reticulata
ENSCSEG00000003266	-	91	79.832	ENSPPYG00000008244	-	100	79.832	Pongo_abelii
ENSCSEG00000003266	-	87	54.065	ENSPCAG00000010552	MSI2	100	54.065	Procavia_capensis
ENSCSEG00000003266	-	91	76.451	ENSPVAG00000017053	MSI2	100	76.451	Pteropus_vampyrus
ENSCSEG00000003266	-	100	80.793	ENSPNYG00000018393	msi2a	100	80.793	Pundamilia_nyererei
ENSCSEG00000003266	-	100	82.371	ENSPNAG00000014957	msi2a	100	82.675	Pygocentrus_nattereri
ENSCSEG00000003266	-	100	82.154	ENSPNAG00000000844	msi2b	100	82.462	Pygocentrus_nattereri
ENSCSEG00000003266	-	91	83.094	ENSRNOG00000025338	Msi2	100	83.094	Rattus_norvegicus
ENSCSEG00000003266	-	91	82.143	ENSSBOG00000026425	MSI2	100	78.730	Saimiri_boliviensis_boliviensis
ENSCSEG00000003266	-	92	79.365	ENSSHAG00000008672	MSI2	100	79.365	Sarcophilus_harrisii
ENSCSEG00000003266	-	100	76.446	ENSSFOG00015012168	msi2b	100	76.446	Scleropages_formosus
ENSCSEG00000003266	-	92	79.125	ENSSFOG00015021687	-	97	79.125	Scleropages_formosus
ENSCSEG00000003266	-	100	80.864	ENSSMAG00000018484	msi2a	100	80.864	Scophthalmus_maximus
ENSCSEG00000003266	-	100	81.173	ENSSDUG00000014507	msi2a	100	81.173	Seriola_dumerili
ENSCSEG00000003266	-	100	80.838	ENSSDUG00000021968	-	99	92.647	Seriola_dumerili
ENSCSEG00000003266	-	100	81.173	ENSSLDG00000017172	msi2a	100	81.173	Seriola_lalandi_dorsalis
ENSCSEG00000003266	-	57	90.441	ENSSPUG00000000913	-	94	90.441	Sphenodon_punctatus
ENSCSEG00000003266	-	97	81.673	ENSSPAG00000017793	msi2a	100	75.375	Stegastes_partitus
ENSCSEG00000003266	-	100	79.878	ENSSSCG00000038505	MSI2	100	79.878	Sus_scrofa
ENSCSEG00000003266	-	85	79.487	ENSTGUG00000008452	MSI2	100	79.487	Taeniopygia_guttata
ENSCSEG00000003266	-	100	78.932	ENSTRUG00000021248	msi2a	100	78.932	Takifugu_rubripes
ENSCSEG00000003266	-	73	73.750	ENSTBEG00000001241	MSI2	73	73.750	Tupaia_belangeri
ENSCSEG00000003266	-	91	75.630	ENSTTRG00000002189	MSI2	100	75.630	Tursiops_truncatus
ENSCSEG00000003266	-	92	83.502	ENSUAMG00000000700	MSI2	97	83.502	Ursus_americanus
ENSCSEG00000003266	-	87	76.136	ENSUMAG00000000505	MSI2	95	76.136	Ursus_maritimus
ENSCSEG00000003266	-	55	71.429	ENSVPAG00000006837	-	62	71.429	Vicugna_pacos
ENSCSEG00000003266	-	100	75.723	ENSVVUG00000011783	MSI2	100	75.723	Vulpes_vulpes
ENSCSEG00000003266	-	96	81.557	ENSXCOG00000006113	msi2a	88	77.778	Xiphophorus_couchianus
ENSCSEG00000003266	-	97	81.673	ENSXMAG00000000608	msi2a	99	79.743	Xiphophorus_maculatus