EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000003495 (Gene tree)
Gene ID: 103379303
Gene Symbol: -
Alias: -
Full Name: tudor domain-containing protein 6
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5382 bases
Position: chr1:11184185-11189566
Accession: 103379303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000005402	TUDOR	PF00567.24	3.8e-148	1	7
ENSCSEP00000005402	TUDOR	PF00567.24	3.8e-148	2	7
ENSCSEP00000005402	TUDOR	PF00567.24	3.8e-148	3	7
ENSCSEP00000005402	TUDOR	PF00567.24	3.8e-148	4	7
ENSCSEP00000005402	TUDOR	PF00567.24	3.8e-148	5	7
ENSCSEP00000005402	TUDOR	PF00567.24	3.8e-148	6	7
ENSCSEP00000005402	TUDOR	PF00567.24	3.8e-148	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005461	-	5144	XM_008310818	ENSCSEP00000005402	1647 (aa)	XP_008309040	UPI00049834AE

Gene Model

Click here to download ENSCSEG00000003495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000003495	-	98	35.526	ENSCSEG00000019023	tdrd6	83	35.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003495	-	98	37.255	ENSAPOG00000023805	tdrd6	87	37.255	Acanthochromis_polyacanthus
ENSCSEG00000003495	-	99	50.416	ENSAPOG00000020893	-	99	50.416	Acanthochromis_polyacanthus
ENSCSEG00000003495	-	99	55.607	ENSACIG00000009194	-	99	55.607	Amphilophus_citrinellus
ENSCSEG00000003495	-	98	38.298	ENSACIG00000012633	-	98	38.298	Amphilophus_citrinellus
ENSCSEG00000003495	-	98	30.715	ENSAOCG00000013365	tdrd6	73	30.715	Amphiprion_ocellaris
ENSCSEG00000003495	-	100	59.434	ENSAOCG00000017073	-	99	59.434	Amphiprion_ocellaris
ENSCSEG00000003495	-	100	49.930	ENSAPEG00000011090	-	98	49.825	Amphiprion_percula
ENSCSEG00000003495	-	98	31.087	ENSAPEG00000015328	tdrd6	86	31.087	Amphiprion_percula
ENSCSEG00000003495	-	98	38.798	ENSATEG00000016586	tdrd6	82	38.798	Anabas_testudineus
ENSCSEG00000003495	-	99	62.295	ENSATEG00000001389	si:ch211-189e2.3	99	60.825	Anabas_testudineus
ENSCSEG00000003495	-	99	30.455	ENSANAG00000004725	TDRD6	84	30.455	Aotus_nancymaae
ENSCSEG00000003495	-	99	48.607	ENSACLG00000003092	-	99	48.607	Astatotilapia_calliptera
ENSCSEG00000003495	-	98	36.697	ENSACLG00000007717	-	84	36.697	Astatotilapia_calliptera
ENSCSEG00000003495	-	99	31.130	ENSAMXG00000010029	tdrd6	73	31.130	Astyanax_mexicanus
ENSCSEG00000003495	-	95	40.933	ENSAMXG00000032110	si:ch211-189e2.3	99	33.961	Astyanax_mexicanus
ENSCSEG00000003495	-	98	30.769	ENSCCAG00000027454	TDRD6	83	30.769	Cebus_capucinus
ENSCSEG00000003495	-	50	41.727	ENSCVAG00000001528	-	92	41.727	Cyprinodon_variegatus
ENSCSEG00000003495	-	98	43.627	ENSDARG00000089954	si:ch211-189e2.3	92	43.069	Danio_rerio
ENSCSEG00000003495	-	98	39.594	ENSDARG00000070052	tdrd6	76	39.594	Danio_rerio
ENSCSEG00000003495	-	98	31.925	ENSETEG00000015260	TDRD6	83	31.925	Echinops_telfairi
ENSCSEG00000003495	-	79	31.818	ENSEEUG00000010497	-	50	31.818	Erinaceus_europaeus
ENSCSEG00000003495	-	98	39.565	ENSELUG00000010350	tdrd6	75	39.565	Esox_lucius
ENSCSEG00000003495	-	98	48.095	ENSELUG00000018873	-	99	48.095	Esox_lucius
ENSCSEG00000003495	-	85	32.500	ENSFDAG00000005622	TDRD6	80	32.673	Fukomys_damarensis
ENSCSEG00000003495	-	100	35.124	ENSFHEG00000022915	tdrd6	77	35.124	Fundulus_heteroclitus
ENSCSEG00000003495	-	93	35.340	ENSGMOG00000012765	-	99	35.340	Gadus_morhua
ENSCSEG00000003495	-	95	35.703	ENSGMOG00000005132	tdrd6	99	35.455	Gadus_morhua
ENSCSEG00000003495	-	98	37.981	ENSGAFG00000009328	tdrd6	77	37.981	Gambusia_affinis
ENSCSEG00000003495	-	98	30.651	ENSGACG00000004820	tdrd6	100	30.651	Gasterosteus_aculeatus
ENSCSEG00000003495	-	97	31.336	ENSGAGG00000019966	TDRD6	84	31.336	Gopherus_agassizii
ENSCSEG00000003495	-	99	31.188	ENSGGOG00000012971	TDRD6	83	31.188	Gorilla_gorilla
ENSCSEG00000003495	-	99	48.786	ENSHBUG00000000351	-	99	48.786	Haplochromis_burtoni
ENSCSEG00000003495	-	98	36.697	ENSHBUG00000012579	tdrd6	80	36.697	Haplochromis_burtoni
ENSCSEG00000003495	-	98	39.066	ENSHCOG00000019950	tdrd6	89	39.066	Hippocampus_comes
ENSCSEG00000003495	-	99	46.300	ENSHCOG00000017328	-	100	46.300	Hippocampus_comes
ENSCSEG00000003495	-	98	39.906	ENSIPUG00000023805	tdrd6	77	39.906	Ictalurus_punctatus
ENSCSEG00000003495	-	99	32.275	ENSSTOG00000028193	TDRD6	75	32.275	Ictidomys_tridecemlineatus
ENSCSEG00000003495	-	99	51.456	ENSKMAG00000015790	-	99	51.456	Kryptolebias_marmoratus
ENSCSEG00000003495	-	98	40.000	ENSLBEG00000022955	tdrd6	84	40.000	Labrus_bergylta
ENSCSEG00000003495	-	99	56.512	ENSLBEG00000004565	-	99	56.512	Labrus_bergylta
ENSCSEG00000003495	-	99	34.426	ENSLACG00000010837	TDRD6	100	34.426	Latimeria_chalumnae
ENSCSEG00000003495	-	98	33.228	ENSLOCG00000016482	tdrd6	99	33.228	Lepisosteus_oculatus
ENSCSEG00000003495	-	98	31.553	ENSMMUG00000019252	TDRD6	83	31.553	Macaca_mulatta
ENSCSEG00000003495	-	99	58.744	ENSMAMG00000000227	-	99	58.744	Mastacembelus_armatus
ENSCSEG00000003495	-	98	31.324	ENSMAMG00000007725	tdrd6	82	31.324	Mastacembelus_armatus
ENSCSEG00000003495	-	98	36.697	ENSMZEG00005003573	tdrd6	79	36.697	Maylandia_zebra
ENSCSEG00000003495	-	99	48.786	ENSMZEG00005012754	-	99	48.786	Maylandia_zebra
ENSCSEG00000003495	-	79	30.221	ENSMGAG00000014281	-	74	30.244	Meleagris_gallopavo
ENSCSEG00000003495	-	99	32.402	ENSMAUG00000001192	Tdrd6	80	32.402	Mesocricetus_auratus
ENSCSEG00000003495	-	95	30.579	ENSMICG00000030777	TDRD6	78	30.579	Microcebus_murinus
ENSCSEG00000003495	-	98	41.848	ENSMMOG00000015651	tdrd6	85	41.848	Mola_mola
ENSCSEG00000003495	-	99	32.584	ENSMODG00000018889	TDRD6	77	32.584	Monodelphis_domestica
ENSCSEG00000003495	-	98	59.135	ENSMALG00000019184	-	99	59.135	Monopterus_albus
ENSCSEG00000003495	-	99	40.404	ENSMALG00000019679	tdrd6	79	40.404	Monopterus_albus
ENSCSEG00000003495	-	92	34.577	ENSMUSG00000040140	Tdrd6	72	34.577	Mus_musculus
ENSCSEG00000003495	-	98	32.973	MGP_SPRETEiJ_G0022544	Tdrd6	75	32.973	Mus_spretus
ENSCSEG00000003495	-	98	40.000	ENSNBRG00000018258	tdrd6	89	40.000	Neolamprologus_brichardi
ENSCSEG00000003495	-	98	56.500	ENSNBRG00000007041	-	99	56.500	Neolamprologus_brichardi
ENSCSEG00000003495	-	99	33.146	ENSMEUG00000014304	TDRD6	76	33.146	Notamacropus_eugenii
ENSCSEG00000003495	-	98	37.989	ENSONIG00000001218	tdrd6	100	37.989	Oreochromis_niloticus
ENSCSEG00000003495	-	94	33.333	ENSOANG00000008274	-	73	33.333	Ornithorhynchus_anatinus
ENSCSEG00000003495	-	98	31.383	ENSOCUG00000000760	TDRD6	80	31.383	Oryctolagus_cuniculus
ENSCSEG00000003495	-	96	30.000	ENSORLG00000015951	amh	70	30.000	Oryzias_latipes
ENSCSEG00000003495	-	96	30.549	ENSORLG00020005897	amh	66	30.549	Oryzias_latipes_hni
ENSCSEG00000003495	-	96	30.769	ENSORLG00015001382	amh	69	30.769	Oryzias_latipes_hsok
ENSCSEG00000003495	-	91	31.973	ENSOMEG00000014481	tdrd6	79	31.573	Oryzias_melastigma
ENSCSEG00000003495	-	99	31.207	ENSOGAG00000000404	TDRD6	74	31.435	Otolemur_garnettii
ENSCSEG00000003495	-	60	31.073	ENSPPAG00000013878	-	65	31.073	Pan_paniscus
ENSCSEG00000003495	-	99	31.551	ENSPTRG00000018237	TDRD6	83	31.188	Pan_troglodytes
ENSCSEG00000003495	-	98	33.410	ENSPKIG00000012265	tdrd6	82	33.410	Paramormyrops_kingsleyae
ENSCSEG00000003495	-	87	34.375	ENSPSIG00000000397	-	81	34.375	Pelodiscus_sinensis
ENSCSEG00000003495	-	95	34.375	ENSPSIG00000017275	-	66	34.375	Pelodiscus_sinensis
ENSCSEG00000003495	-	99	39.796	ENSPMGG00000014626	tdrd6	99	39.796	Periophthalmus_magnuspinnatus
ENSCSEG00000003495	-	99	41.736	ENSPMGG00000000674	-	99	41.736	Periophthalmus_magnuspinnatus
ENSCSEG00000003495	-	88	33.621	ENSPMAG00000008166	-	88	33.621	Petromyzon_marinus
ENSCSEG00000003495	-	99	30.570	ENSPCIG00000027676	TDRD6	82	30.570	Phascolarctos_cinereus
ENSCSEG00000003495	-	99	30.626	ENSPFOG00000012487	tdrd6	99	30.285	Poecilia_formosa
ENSCSEG00000003495	-	99	37.850	ENSPLAG00000020472	tdrd6	76	37.850	Poecilia_latipinna
ENSCSEG00000003495	-	99	39.698	ENSPMEG00000000075	tdrd6	69	39.698	Poecilia_mexicana
ENSCSEG00000003495	-	99	40.761	ENSPREG00000018829	tdrd6	77	40.761	Poecilia_reticulata
ENSCSEG00000003495	-	84	35.101	ENSPCAG00000012381	TDRD6	60	35.101	Procavia_capensis
ENSCSEG00000003495	-	98	39.459	ENSPNYG00000021847	tdrd6	89	39.459	Pundamilia_nyererei
ENSCSEG00000003495	-	99	55.000	ENSPNYG00000008466	-	99	55.000	Pundamilia_nyererei
ENSCSEG00000003495	-	99	32.558	ENSPNAG00000000359	si:ch211-189e2.3	92	32.558	Pygocentrus_nattereri
ENSCSEG00000003495	-	98	32.332	ENSPNAG00000008860	tdrd6	86	32.692	Pygocentrus_nattereri
ENSCSEG00000003495	-	98	30.108	ENSRNOG00000025693	Tdrd6	76	30.108	Rattus_norvegicus
ENSCSEG00000003495	-	98	30.769	ENSSBOG00000031889	TDRD6	83	30.769	Saimiri_boliviensis_boliviensis
ENSCSEG00000003495	-	98	32.924	ENSSFOG00015014356	tdrd6	77	32.924	Scleropages_formosus
ENSCSEG00000003495	-	98	54.265	ENSSMAG00000014450	-	99	54.265	Scophthalmus_maximus
ENSCSEG00000003495	-	93	33.077	ENSSMAG00000004490	tdrd6	78	33.077	Scophthalmus_maximus
ENSCSEG00000003495	-	98	36.275	ENSSDUG00000006559	tdrd6	77	36.275	Seriola_dumerili
ENSCSEG00000003495	-	99	56.567	ENSSDUG00000007597	-	98	57.084	Seriola_dumerili
ENSCSEG00000003495	-	100	59.211	ENSSLDG00000002178	-	99	59.211	Seriola_lalandi_dorsalis
ENSCSEG00000003495	-	96	36.765	ENSSLDG00000004470	tdrd6	73	36.765	Seriola_lalandi_dorsalis
ENSCSEG00000003495	-	98	37.168	ENSSPAG00000013194	tdrd6	90	37.168	Stegastes_partitus
ENSCSEG00000003495	-	97	54.348	ENSTRUG00000023197	-	98	42.844	Takifugu_rubripes
ENSCSEG00000003495	-	96	41.871	ENSTNIG00000019317	-	88	41.871	Tetraodon_nigroviridis
ENSCSEG00000003495	-	82	34.737	ENSUMAG00000005127	TDRD6	65	34.737	Ursus_maritimus
ENSCSEG00000003495	-	98	31.164	ENSVVUG00000029302	TDRD6	77	31.507	Vulpes_vulpes
ENSCSEG00000003495	-	98	33.690	ENSXETG00000016255	tdrd6	92	33.690	Xenopus_tropicalis
ENSCSEG00000003495	-	91	37.768	ENSXCOG00000008476	tdrd6	95	37.768	Xiphophorus_couchianus
ENSCSEG00000003495	-	98	37.339	ENSXMAG00000025787	tdrd6	79	37.339	Xiphophorus_maculatus