EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000003550 (Gene tree)
Gene ID: 103389391
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 13494 bases
Position: chr14:6610803-6624296
Accession: 103389391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000005483	LSM	PF01423.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005543	-	693	XM_008324783	ENSCSEP00000005483	127 (aa)	XP_008323005	UPI00022B11E8
ENSCSET00000005557	-	3684	XM_008324781	ENSCSEP00000005497	468 (aa)	XP_008323003	UPI000498391A
ENSCSET00000005551	-	978	-	ENSCSEP00000005490	325 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000003550's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG
csem04020	Calcium signaling pathway	KEGG
csem04080	Neuroactive ligand-receptor interaction	KEGG
csem04270	Vascular smooth muscle contraction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003550	-	100	100.000	ENSMAMG00000007761	-	100	100.000	Mastacembelus_armatus