EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000003574 (Gene tree)
Gene ID: 103388261
Gene Symbol: cnot3a
Alias: fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name: CCR4-NOT transcription complex subunit 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 11001 bases
Position: chr13:5466555-5477555
Accession: 103388261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000005536	Not3	PF04065.15	9.7e-97	1	1
ENSCSEP00000005548	Not3	PF04065.15	9.8e-97	1	1
ENSCSEP00000005513	Not3	PF04065.15	9.9e-97	1	1
ENSCSEP00000005526	Not3	PF04065.15	9.9e-97	1	1
ENSCSEP00000005536	NOT2_3_5	PF04153.18	1.9e-38	1	1
ENSCSEP00000005513	NOT2_3_5	PF04153.18	1.9e-38	1	1
ENSCSEP00000005526	NOT2_3_5	PF04153.18	1.9e-38	1	1
ENSCSEP00000005548	NOT2_3_5	PF04153.18	8.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005573	-	5171	-	ENSCSEP00000005513	922 (aa)	-	-
ENSCSET00000005608	-	4066	XM_008323172	ENSCSEP00000005548	914 (aa)	XP_008321394	-
ENSCSET00000005596	-	5114	-	ENSCSEP00000005536	903 (aa)	-	-
ENSCSET00000005586	-	5171	-	ENSCSEP00000005526	922 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000003574's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000003574	cnot3a	100	58.174	ENSCSEG00000016892	cnot3b	70	80.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003574	cnot3a	68	88.852	ENSG00000088038	CNOT3	100	92.784	Homo_sapiens
ENSCSEG00000003574	cnot3a	58	89.324	ENSAPOG00000015499	CNOT3	93	89.324	Acanthochromis_polyacanthus
ENSCSEG00000003574	cnot3a	57	86.159	ENSAPOG00000015002	cnot3b	76	88.448	Acanthochromis_polyacanthus
ENSCSEG00000003574	cnot3a	68	89.180	ENSAMEG00000004528	CNOT3	85	89.180	Ailuropoda_melanoleuca
ENSCSEG00000003574	cnot3a	61	91.071	ENSACIG00000003652	cnot3b	99	84.553	Amphilophus_citrinellus
ENSCSEG00000003574	cnot3a	100	91.558	ENSACIG00000006635	cnot3a	100	94.737	Amphilophus_citrinellus
ENSCSEG00000003574	cnot3a	97	60.538	ENSAOCG00000018385	-	99	75.446	Amphiprion_ocellaris
ENSCSEG00000003574	cnot3a	99	88.950	ENSAOCG00000023769	cnot3a	99	88.184	Amphiprion_ocellaris
ENSCSEG00000003574	cnot3a	100	91.323	ENSAPEG00000006624	cnot3a	100	90.130	Amphiprion_percula
ENSCSEG00000003574	cnot3a	97	63.272	ENSAPEG00000002640	cnot3b	80	84.322	Amphiprion_percula
ENSCSEG00000003574	cnot3a	100	91.974	ENSATEG00000022737	cnot3a	100	91.432	Anabas_testudineus
ENSCSEG00000003574	cnot3a	69	88.636	ENSACAG00000016085	CNOT3	89	88.852	Anolis_carolinensis
ENSCSEG00000003574	cnot3a	68	88.852	ENSANAG00000025756	CNOT3	85	88.852	Aotus_nancymaae
ENSCSEG00000003574	cnot3a	100	92.000	ENSACLG00000021136	cnot3a	100	91.027	Astatotilapia_calliptera
ENSCSEG00000003574	cnot3a	100	67.330	ENSAMXG00000009447	cnot3b	99	91.351	Astyanax_mexicanus
ENSCSEG00000003574	cnot3a	100	72.910	ENSAMXG00000012359	cnot3a	100	72.428	Astyanax_mexicanus
ENSCSEG00000003574	cnot3a	68	87.781	ENSBTAG00000014900	CNOT3	86	88.852	Bos_taurus
ENSCSEG00000003574	cnot3a	68	88.852	ENSCJAG00000001094	CNOT3	85	88.852	Callithrix_jacchus
ENSCSEG00000003574	cnot3a	68	88.852	ENSCAFG00000002699	CNOT3	85	88.852	Canis_familiaris
ENSCSEG00000003574	cnot3a	68	88.852	ENSCAFG00020018359	CNOT3	85	88.852	Canis_lupus_dingo
ENSCSEG00000003574	cnot3a	62	85.806	ENSCHIG00000015302	CNOT3	86	86.842	Capra_hircus
ENSCSEG00000003574	cnot3a	68	88.852	ENSTSYG00000008058	CNOT3	85	88.852	Carlito_syrichta
ENSCSEG00000003574	cnot3a	72	81.609	ENSCAPG00000009533	CNOT3	85	88.852	Cavia_aperea
ENSCSEG00000003574	cnot3a	76	75.190	ENSCPOG00000020741	CNOT3	85	88.852	Cavia_porcellus
ENSCSEG00000003574	cnot3a	68	88.852	ENSCCAG00000036290	CNOT3	85	88.852	Cebus_capucinus
ENSCSEG00000003574	cnot3a	68	88.852	ENSCATG00000030324	CNOT3	85	88.852	Cercocebus_atys
ENSCSEG00000003574	cnot3a	68	87.781	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSCSEG00000003574	cnot3a	68	88.852	ENSCSAG00000001900	CNOT3	85	88.852	Chlorocebus_sabaeus
ENSCSEG00000003574	cnot3a	69	88.312	ENSCPBG00000011655	CNOT3	89	88.852	Chrysemys_picta_bellii
ENSCSEG00000003574	cnot3a	79	54.259	ENSCING00000000293	-	72	67.769	Ciona_intestinalis
ENSCSEG00000003574	cnot3a	68	87.460	ENSCANG00000013408	CNOT3	85	88.852	Colobus_angolensis_palliatus
ENSCSEG00000003574	cnot3a	68	89.180	ENSCGRG00001000855	Cnot3	85	89.180	Cricetulus_griseus_chok1gshd
ENSCSEG00000003574	cnot3a	100	84.649	ENSCVAG00000008168	cnot3a	100	83.676	Cyprinodon_variegatus
ENSCSEG00000003574	cnot3a	100	68.017	ENSDARG00000019842	cnot3b	100	65.714	Danio_rerio
ENSCSEG00000003574	cnot3a	100	74.493	ENSDARG00000007135	cnot3a	100	73.583	Danio_rerio
ENSCSEG00000003574	cnot3a	68	88.852	ENSDNOG00000045972	CNOT3	85	88.852	Dasypus_novemcinctus
ENSCSEG00000003574	cnot3a	68	88.852	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSCSEG00000003574	cnot3a	51	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSCSEG00000003574	cnot3a	71	71.753	ENSEBUG00000010437	cnot3a	71	69.156	Eptatretus_burgeri
ENSCSEG00000003574	cnot3a	68	88.852	ENSEASG00005021591	CNOT3	84	88.852	Equus_asinus_asinus
ENSCSEG00000003574	cnot3a	68	88.852	ENSECAG00000023181	CNOT3	84	88.852	Equus_caballus
ENSCSEG00000003574	cnot3a	100	66.909	ENSELUG00000000953	cnot3b	100	65.514	Esox_lucius
ENSCSEG00000003574	cnot3a	100	80.380	ENSELUG00000014743	cnot3a	100	81.118	Esox_lucius
ENSCSEG00000003574	cnot3a	68	87.781	ENSFCAG00000014042	CNOT3	85	88.852	Felis_catus
ENSCSEG00000003574	cnot3a	100	85.049	ENSFHEG00000023166	cnot3a	96	97.436	Fundulus_heteroclitus
ENSCSEG00000003574	cnot3a	95	79.062	ENSGMOG00000005365	cnot3a	98	77.828	Gadus_morhua
ENSCSEG00000003574	cnot3a	100	85.466	ENSGAFG00000013094	cnot3a	100	85.049	Gambusia_affinis
ENSCSEG00000003574	cnot3a	68	83.459	ENSGACG00000009395	cnot3b	55	83.459	Gasterosteus_aculeatus
ENSCSEG00000003574	cnot3a	95	83.986	ENSGACG00000011489	cnot3a	98	82.949	Gasterosteus_aculeatus
ENSCSEG00000003574	cnot3a	69	81.373	ENSGAGG00000012677	CNOT3	87	86.239	Gopherus_agassizii
ENSCSEG00000003574	cnot3a	68	88.852	ENSGGOG00000012996	CNOT3	85	88.852	Gorilla_gorilla
ENSCSEG00000003574	cnot3a	100	92.108	ENSHBUG00000005275	cnot3a	100	91.135	Haplochromis_burtoni
ENSCSEG00000003574	cnot3a	99	58.929	ENSHBUG00000019699	cnot3b	56	55.766	Haplochromis_burtoni
ENSCSEG00000003574	cnot3a	68	87.781	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSCSEG00000003574	cnot3a	61	82.759	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSCSEG00000003574	cnot3a	100	84.017	ENSHCOG00000020968	cnot3a	96	96.313	Hippocampus_comes
ENSCSEG00000003574	cnot3a	100	66.416	ENSIPUG00000000167	cnot3	100	66.381	Ictalurus_punctatus
ENSCSEG00000003574	cnot3a	68	88.852	ENSSTOG00000028248	CNOT3	85	88.852	Ictidomys_tridecemlineatus
ENSCSEG00000003574	cnot3a	68	89.180	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSCSEG00000003574	cnot3a	100	88.350	ENSKMAG00000004863	cnot3a	100	88.350	Kryptolebias_marmoratus
ENSCSEG00000003574	cnot3a	100	63.958	ENSKMAG00000018723	cnot3b	100	64.234	Kryptolebias_marmoratus
ENSCSEG00000003574	cnot3a	97	64.464	ENSLBEG00000018278	cnot3b	72	89.542	Labrus_bergylta
ENSCSEG00000003574	cnot3a	81	97.696	ENSLBEG00000017296	cnot3a	95	97.696	Labrus_bergylta
ENSCSEG00000003574	cnot3a	69	85.852	ENSLACG00000009742	CNOT3	88	87.213	Latimeria_chalumnae
ENSCSEG00000003574	cnot3a	53	93.956	ENSLOCG00000000005	cnot3b	79	93.956	Lepisosteus_oculatus
ENSCSEG00000003574	cnot3a	68	88.235	ENSLAFG00000022133	CNOT3	85	88.235	Loxodonta_africana
ENSCSEG00000003574	cnot3a	68	88.852	ENSMFAG00000040073	CNOT3	85	88.852	Macaca_fascicularis
ENSCSEG00000003574	cnot3a	62	91.176	ENSMMUG00000009698	CNOT3	100	95.098	Macaca_mulatta
ENSCSEG00000003574	cnot3a	68	88.852	ENSMNEG00000036750	CNOT3	85	88.852	Macaca_nemestrina
ENSCSEG00000003574	cnot3a	68	88.852	ENSMLEG00000036579	CNOT3	84	88.852	Mandrillus_leucophaeus
ENSCSEG00000003574	cnot3a	100	65.377	ENSMZEG00005002466	cnot3b	100	63.119	Maylandia_zebra
ENSCSEG00000003574	cnot3a	100	92.000	ENSMZEG00005016304	cnot3a	100	91.027	Maylandia_zebra
ENSCSEG00000003574	cnot3a	68	89.180	ENSMAUG00000014996	Cnot3	85	89.180	Mesocricetus_auratus
ENSCSEG00000003574	cnot3a	68	88.852	ENSMICG00000002370	CNOT3	84	88.852	Microcebus_murinus
ENSCSEG00000003574	cnot3a	100	88.841	ENSMMOG00000016446	cnot3a	100	87.541	Mola_mola
ENSCSEG00000003574	cnot3a	62	88.889	ENSMMOG00000013086	cnot3b	89	84.739	Mola_mola
ENSCSEG00000003574	cnot3a	58	88.852	ENSMODG00000004066	CNOT3	73	88.852	Monodelphis_domestica
ENSCSEG00000003574	cnot3a	100	90.239	ENSMALG00000009204	cnot3a	100	89.805	Monopterus_albus
ENSCSEG00000003574	cnot3a	58	86.149	ENSMALG00000004936	cnot3b	74	85.859	Monopterus_albus
ENSCSEG00000003574	cnot3a	68	89.180	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSCSEG00000003574	cnot3a	68	89.180	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSCSEG00000003574	cnot3a	68	89.180	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSCSEG00000003574	cnot3a	68	89.180	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSCSEG00000003574	cnot3a	68	87.781	ENSMPUG00000010352	CNOT3	85	88.852	Mustela_putorius_furo
ENSCSEG00000003574	cnot3a	68	88.852	ENSNGAG00000013266	Cnot3	85	88.852	Nannospalax_galili
ENSCSEG00000003574	cnot3a	80	85.772	ENSNBRG00000003336	cnot3b	96	88.496	Neolamprologus_brichardi
ENSCSEG00000003574	cnot3a	100	91.943	ENSNBRG00000002401	cnot3a	100	91.060	Neolamprologus_brichardi
ENSCSEG00000003574	cnot3a	68	88.852	ENSNLEG00000006272	CNOT3	84	88.852	Nomascus_leucogenys
ENSCSEG00000003574	cnot3a	68	88.852	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSCSEG00000003574	cnot3a	100	91.676	ENSONIG00000006568	cnot3a	100	91.135	Oreochromis_niloticus
ENSCSEG00000003574	cnot3a	68	88.852	ENSOCUG00000007691	CNOT3	85	88.852	Oryctolagus_cuniculus
ENSCSEG00000003574	cnot3a	100	88.108	ENSORLG00000011174	cnot3a	100	87.243	Oryzias_latipes
ENSCSEG00000003574	cnot3a	100	66.525	ENSORLG00020005779	cnot3b	100	65.635	Oryzias_latipes_hni
ENSCSEG00000003574	cnot3a	100	88.216	ENSORLG00020008009	cnot3a	100	87.351	Oryzias_latipes_hni
ENSCSEG00000003574	cnot3a	100	66.384	ENSORLG00015019021	cnot3b	100	65.111	Oryzias_latipes_hsok
ENSCSEG00000003574	cnot3a	100	87.892	ENSORLG00015013729	cnot3a	100	87.243	Oryzias_latipes_hsok
ENSCSEG00000003574	cnot3a	100	65.717	ENSOMEG00000015557	cnot3b	100	64.256	Oryzias_melastigma
ENSCSEG00000003574	cnot3a	100	88.324	ENSOMEG00000010309	cnot3a	99	98.431	Oryzias_melastigma
ENSCSEG00000003574	cnot3a	84	79.063	ENSOGAG00000006945	CNOT3	85	88.852	Otolemur_garnettii
ENSCSEG00000003574	cnot3a	50	90.374	ENSOARG00000002981	CNOT3	66	90.374	Ovis_aries
ENSCSEG00000003574	cnot3a	68	88.852	ENSPPAG00000002748	CNOT3	85	88.852	Pan_paniscus
ENSCSEG00000003574	cnot3a	68	87.781	ENSPPRG00000011705	CNOT3	85	88.852	Panthera_pardus
ENSCSEG00000003574	cnot3a	61	89.262	ENSPTIG00000008781	CNOT3	96	89.262	Panthera_tigris_altaica
ENSCSEG00000003574	cnot3a	68	88.852	ENSPTRG00000011444	CNOT3	85	88.852	Pan_troglodytes
ENSCSEG00000003574	cnot3a	68	88.852	ENSPTRG00000046717	-	85	88.852	Pan_troglodytes
ENSCSEG00000003574	cnot3a	68	88.852	ENSPANG00000009375	CNOT3	85	88.852	Papio_anubis
ENSCSEG00000003574	cnot3a	100	66.285	ENSPKIG00000011733	CNOT3	100	64.803	Paramormyrops_kingsleyae
ENSCSEG00000003574	cnot3a	68	93.590	ENSPKIG00000015967	-	100	87.843	Paramormyrops_kingsleyae
ENSCSEG00000003574	cnot3a	72	78.082	ENSPEMG00000024185	Cnot3	85	89.180	Peromyscus_maniculatus_bairdii
ENSCSEG00000003574	cnot3a	68	88.525	ENSPCIG00000023018	CNOT3	90	88.525	Phascolarctos_cinereus
ENSCSEG00000003574	cnot3a	100	86.009	ENSPFOG00000008693	cnot3a	93	94.771	Poecilia_formosa
ENSCSEG00000003574	cnot3a	100	65.021	ENSPFOG00000007168	cnot3b	100	63.285	Poecilia_formosa
ENSCSEG00000003574	cnot3a	100	65.021	ENSPLAG00000013457	cnot3b	100	63.285	Poecilia_latipinna
ENSCSEG00000003574	cnot3a	100	85.575	ENSPLAG00000013324	cnot3a	100	84.940	Poecilia_latipinna
ENSCSEG00000003574	cnot3a	100	65.021	ENSPMEG00000010184	cnot3b	100	63.389	Poecilia_mexicana
ENSCSEG00000003574	cnot3a	100	87.093	ENSPMEG00000017718	cnot3a	100	85.792	Poecilia_mexicana
ENSCSEG00000003574	cnot3a	100	84.159	ENSPREG00000007592	cnot3a	100	93.927	Poecilia_reticulata
ENSCSEG00000003574	cnot3a	68	88.525	ENSPPYG00000010372	CNOT3	85	88.525	Pongo_abelii
ENSCSEG00000003574	cnot3a	59	91.525	ENSPCAG00000011999	CNOT3	56	91.525	Procavia_capensis
ENSCSEG00000003574	cnot3a	68	88.852	ENSPCOG00000017673	CNOT3	86	88.852	Propithecus_coquereli
ENSCSEG00000003574	cnot3a	68	87.460	ENSPVAG00000015564	CNOT3	85	88.525	Pteropus_vampyrus
ENSCSEG00000003574	cnot3a	100	92.000	ENSPNYG00000002282	cnot3a	100	91.027	Pundamilia_nyererei
ENSCSEG00000003574	cnot3a	99	59.873	ENSPNYG00000003358	cnot3b	54	51.796	Pundamilia_nyererei
ENSCSEG00000003574	cnot3a	100	72.021	ENSPNAG00000017679	cnot3a	100	72.564	Pygocentrus_nattereri
ENSCSEG00000003574	cnot3a	100	68.090	ENSPNAG00000027459	cnot3b	100	67.842	Pygocentrus_nattereri
ENSCSEG00000003574	cnot3a	68	89.180	ENSRNOG00000053234	Cnot3	85	89.180	Rattus_norvegicus
ENSCSEG00000003574	cnot3a	68	88.852	ENSRBIG00000031025	CNOT3	85	88.852	Rhinopithecus_bieti
ENSCSEG00000003574	cnot3a	68	88.852	ENSRROG00000003872	CNOT3	85	88.852	Rhinopithecus_roxellana
ENSCSEG00000003574	cnot3a	68	88.852	ENSSBOG00000030268	CNOT3	85	88.852	Saimiri_boliviensis_boliviensis
ENSCSEG00000003574	cnot3a	100	69.338	ENSSFOG00015019203	-	100	68.743	Scleropages_formosus
ENSCSEG00000003574	cnot3a	100	69.668	ENSSFOG00015000248	cnot3	100	67.880	Scleropages_formosus
ENSCSEG00000003574	cnot3a	100	90.958	ENSSMAG00000013235	cnot3a	100	91.604	Scophthalmus_maximus
ENSCSEG00000003574	cnot3a	100	92.549	ENSSDUG00000008181	cnot3a	100	94.332	Seriola_dumerili
ENSCSEG00000003574	cnot3a	97	92.945	ENSSLDG00000014733	cnot3a	99	92.385	Seriola_lalandi_dorsalis
ENSCSEG00000003574	cnot3a	78	74.564	ENSSPUG00000008510	CNOT3	89	88.852	Sphenodon_punctatus
ENSCSEG00000003574	cnot3a	97	93.483	ENSSPAG00000003858	cnot3a	98	92.921	Stegastes_partitus
ENSCSEG00000003574	cnot3a	68	88.852	ENSSSCG00000003264	CNOT3	84	88.852	Sus_scrofa
ENSCSEG00000003574	cnot3a	100	88.178	ENSTRUG00000015732	cnot3a	100	88.829	Takifugu_rubripes
ENSCSEG00000003574	cnot3a	95	61.315	ENSTNIG00000005663	cnot3b	100	58.621	Tetraodon_nigroviridis
ENSCSEG00000003574	cnot3a	95	84.800	ENSTNIG00000008082	cnot3a	100	84.078	Tetraodon_nigroviridis
ENSCSEG00000003574	cnot3a	68	89.180	ENSUAMG00000005234	CNOT3	85	89.180	Ursus_americanus
ENSCSEG00000003574	cnot3a	60	87.770	ENSUMAG00000010934	CNOT3	89	91.597	Ursus_maritimus
ENSCSEG00000003574	cnot3a	67	88.852	ENSVVUG00000008239	CNOT3	84	88.852	Vulpes_vulpes
ENSCSEG00000003574	cnot3a	69	86.262	ENSXETG00000003166	cnot3	88	88.065	Xenopus_tropicalis
ENSCSEG00000003574	cnot3a	100	79.676	ENSXCOG00000019460	cnot3a	96	97.863	Xiphophorus_couchianus
ENSCSEG00000003574	cnot3a	100	84.165	ENSXMAG00000012273	cnot3a	100	84.832	Xiphophorus_maculatus