EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000003616 (Gene tree)
Gene ID: 103390658
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 9919 bases
Position: chr15:4436041-4445959
Accession: 103390658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000005631	SRP72	PF08492.12	2.9e-21	1	1
ENSCSEP00000005595	SRP72	PF08492.12	3e-21	1	1
ENSCSEP00000005646	SRP72	PF08492.12	3e-21	1	1
ENSCSEP00000005587	SRP72	PF08492.12	3e-21	1	1
ENSCSEP00000005605	SRP72	PF08492.12	3e-21	1	1
ENSCSEP00000005620	SRP72	PF08492.12	3.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005655	-	5633	XM_008326586	ENSCSEP00000005595	668 (aa)	XP_008324808	UPI0004955246
ENSCSET00000005647	-	5463	-	ENSCSEP00000005587	669 (aa)	-	-
ENSCSET00000005691	-	5317	-	ENSCSEP00000005631	655 (aa)	-	-
ENSCSET00000005679	-	4525	-	ENSCSEP00000005620	684 (aa)	-	-
ENSCSET00000005666	-	5507	-	ENSCSEP00000005605	669 (aa)	-	-
ENSCSET00000005706	-	2007	-	ENSCSEP00000005646	668 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000003616's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003616	srp72	97	77.454	ENSG00000174780	SRP72	99	77.246	Homo_sapiens
ENSCSEG00000003616	srp72	99	78.045	ENSAPOG00000019438	srp72	97	78.923	Acanthochromis_polyacanthus
ENSCSEG00000003616	srp72	96	77.484	ENSAMEG00000008469	SRP72	99	77.395	Ailuropoda_melanoleuca
ENSCSEG00000003616	srp72	100	91.791	ENSACIG00000000488	srp72	98	91.756	Amphilophus_citrinellus
ENSCSEG00000003616	srp72	100	90.269	ENSAOCG00000011256	srp72	98	91.424	Amphiprion_ocellaris
ENSCSEG00000003616	srp72	100	91.317	ENSAPEG00000001512	srp72	98	91.271	Amphiprion_percula
ENSCSEG00000003616	srp72	92	92.683	ENSATEG00000006781	srp72	99	92.683	Anabas_testudineus
ENSCSEG00000003616	srp72	99	75.982	ENSAPLG00000008751	SRP72	98	75.982	Anas_platyrhynchos
ENSCSEG00000003616	srp72	97	76.507	ENSACAG00000002381	SRP72	98	76.048	Anolis_carolinensis
ENSCSEG00000003616	srp72	95	77.883	ENSANAG00000020836	-	94	77.760	Aotus_nancymaae
ENSCSEG00000003616	srp72	100	91.467	ENSACLG00000014617	srp72	98	91.424	Astatotilapia_calliptera
ENSCSEG00000003616	srp72	98	83.180	ENSAMXG00000004011	srp72	100	83.259	Astyanax_mexicanus
ENSCSEG00000003616	srp72	97	76.994	ENSBTAG00000010593	SRP72	99	76.796	Bos_taurus
ENSCSEG00000003616	srp72	97	76.840	ENSCJAG00000017998	SRP72	99	76.647	Callithrix_jacchus
ENSCSEG00000003616	srp72	97	77.454	ENSCAFG00000002244	SRP72	99	77.545	Canis_familiaris
ENSCSEG00000003616	srp72	97	77.454	ENSCAFG00020027338	SRP72	98	78.253	Canis_lupus_dingo
ENSCSEG00000003616	srp72	97	75.345	ENSCHIG00000021465	SRP72	97	75.538	Capra_hircus
ENSCSEG00000003616	srp72	97	77.932	ENSTSYG00000010571	-	100	76.991	Carlito_syrichta
ENSCSEG00000003616	srp72	87	58.319	ENSCAPG00000016668	SRP72	100	68.605	Cavia_aperea
ENSCSEG00000003616	srp72	97	77.301	ENSCPOG00000000218	SRP72	99	77.246	Cavia_porcellus
ENSCSEG00000003616	srp72	97	75.422	ENSCCAG00000030830	-	97	75.501	Cebus_capucinus
ENSCSEG00000003616	srp72	95	78.006	ENSCCAG00000030683	-	94	77.883	Cebus_capucinus
ENSCSEG00000003616	srp72	98	61.656	ENSCATG00000045359	-	95	61.538	Cercocebus_atys
ENSCSEG00000003616	srp72	97	77.301	ENSCATG00000008072	SRP72	97	77.504	Cercocebus_atys
ENSCSEG00000003616	srp72	97	76.840	ENSCLAG00000003571	SRP72	97	77.350	Chinchilla_lanigera
ENSCSEG00000003616	srp72	97	72.853	ENSCSAG00000005079	SRP72	97	73.313	Chlorocebus_sabaeus
ENSCSEG00000003616	srp72	90	77.193	ENSCHOG00000013240	SRP72	89	77.193	Choloepus_hoffmanni
ENSCSEG00000003616	srp72	96	77.294	ENSCPBG00000015015	SRP72	98	76.524	Chrysemys_picta_bellii
ENSCSEG00000003616	srp72	96	40.896	ENSCING00000002417	-	96	41.045	Ciona_intestinalis
ENSCSEG00000003616	srp72	93	42.284	ENSCSAVG00000011288	-	98	42.229	Ciona_savignyi
ENSCSEG00000003616	srp72	97	77.301	ENSCANG00000041709	SRP72	97	77.504	Colobus_angolensis_palliatus
ENSCSEG00000003616	srp72	99	52.545	ENSCANG00000037920	-	97	54.154	Colobus_angolensis_palliatus
ENSCSEG00000003616	srp72	99	76.796	ENSCGRG00001013548	Srp72	99	77.280	Cricetulus_griseus_chok1gshd
ENSCSEG00000003616	srp72	97	77.008	ENSCGRG00000003013	Srp72	99	77.516	Cricetulus_griseus_crigri
ENSCSEG00000003616	srp72	91	91.297	ENSCVAG00000001520	srp72	100	91.297	Cyprinodon_variegatus
ENSCSEG00000003616	srp72	87	83.158	ENSDARG00000014139	srp72	97	82.729	Danio_rerio
ENSCSEG00000003616	srp72	97	73.089	ENSDNOG00000039012	SRP72	81	73.282	Dasypus_novemcinctus
ENSCSEG00000003616	srp72	97	77.090	ENSDORG00000000171	Srp72	97	76.876	Dipodomys_ordii
ENSCSEG00000003616	srp72	95	40.280	FBgn0038810	Srp72	96	40.280	Drosophila_melanogaster
ENSCSEG00000003616	srp72	96	77.174	ENSETEG00000005191	SRP72	99	77.096	Echinops_telfairi
ENSCSEG00000003616	srp72	77	61.628	ENSEBUG00000003696	srp72	98	61.628	Eptatretus_burgeri
ENSCSEG00000003616	srp72	97	77.454	ENSEASG00005017747	SRP72	99	77.246	Equus_asinus_asinus
ENSCSEG00000003616	srp72	97	77.301	ENSECAG00000006920	SRP72	99	77.096	Equus_caballus
ENSCSEG00000003616	srp72	100	83.358	ENSELUG00000022415	srp72	97	83.486	Esox_lucius
ENSCSEG00000003616	srp72	97	77.623	ENSFCAG00000027600	SRP72	99	77.395	Felis_catus
ENSCSEG00000003616	srp72	96	78.106	ENSFALG00000006713	SRP72	99	77.429	Ficedula_albicollis
ENSCSEG00000003616	srp72	97	76.687	ENSFDAG00000002014	-	97	76.888	Fukomys_damarensis
ENSCSEG00000003616	srp72	97	49.457	ENSFDAG00000009793	-	94	47.833	Fukomys_damarensis
ENSCSEG00000003616	srp72	100	88.191	ENSFHEG00000017652	srp72	90	88.940	Fundulus_heteroclitus
ENSCSEG00000003616	srp72	98	79.573	ENSGMOG00000005986	srp72	97	79.268	Gadus_morhua
ENSCSEG00000003616	srp72	96	77.760	ENSGALG00000011403	SRP72	97	76.876	Gallus_gallus
ENSCSEG00000003616	srp72	100	89.686	ENSGAFG00000017762	srp72	98	89.602	Gambusia_affinis
ENSCSEG00000003616	srp72	100	88.490	ENSGACG00000016749	srp72	97	88.479	Gasterosteus_aculeatus
ENSCSEG00000003616	srp72	88	77.990	ENSGAGG00000024611	SRP72	98	77.909	Gopherus_agassizii
ENSCSEG00000003616	srp72	97	77.147	ENSGGOG00000013234	-	97	77.350	Gorilla_gorilla
ENSCSEG00000003616	srp72	100	91.617	ENSHBUG00000020723	srp72	98	91.577	Haplochromis_burtoni
ENSCSEG00000003616	srp72	97	71.779	ENSHGLG00000005029	-	97	71.649	Heterocephalus_glaber_female
ENSCSEG00000003616	srp72	97	77.147	ENSHGLG00000009791	SRP72	97	77.350	Heterocephalus_glaber_female
ENSCSEG00000003616	srp72	97	60.587	ENSHGLG00000018597	-	96	60.401	Heterocephalus_glaber_female
ENSCSEG00000003616	srp72	90	69.211	ENSHGLG00000010633	-	99	70.321	Heterocephalus_glaber_female
ENSCSEG00000003616	srp72	85	70.667	ENSHGLG00000003950	-	98	70.667	Heterocephalus_glaber_female
ENSCSEG00000003616	srp72	53	59.654	ENSHGLG00000003496	-	98	59.078	Heterocephalus_glaber_female
ENSCSEG00000003616	srp72	97	71.779	ENSHGLG00100011236	-	97	71.649	Heterocephalus_glaber_male
ENSCSEG00000003616	srp72	97	77.147	ENSHGLG00100009021	SRP72	97	77.350	Heterocephalus_glaber_male
ENSCSEG00000003616	srp72	85	70.222	ENSHGLG00100017133	-	98	70.222	Heterocephalus_glaber_male
ENSCSEG00000003616	srp72	97	56.748	ENSHGLG00100009346	-	99	57.186	Heterocephalus_glaber_male
ENSCSEG00000003616	srp72	100	89.222	ENSHCOG00000013760	srp72	100	89.222	Hippocampus_comes
ENSCSEG00000003616	srp72	100	82.511	ENSIPUG00000000210	srp72	98	82.263	Ictalurus_punctatus
ENSCSEG00000003616	srp72	97	77.607	ENSSTOG00000007305	SRP72	97	77.812	Ictidomys_tridecemlineatus
ENSCSEG00000003616	srp72	96	77.484	ENSJJAG00000018324	Srp72	97	77.335	Jaculus_jaculus
ENSCSEG00000003616	srp72	100	88.490	ENSKMAG00000003776	srp72	98	88.379	Kryptolebias_marmoratus
ENSCSEG00000003616	srp72	98	82.875	ENSLOCG00000002628	srp72	97	82.949	Lepisosteus_oculatus
ENSCSEG00000003616	srp72	97	77.454	ENSLAFG00000018307	SRP72	99	77.246	Loxodonta_africana
ENSCSEG00000003616	srp72	97	77.301	ENSMFAG00000031065	SRP72	97	77.504	Macaca_fascicularis
ENSCSEG00000003616	srp72	98	62.423	ENSMFAG00000037164	-	97	62.848	Macaca_fascicularis
ENSCSEG00000003616	srp72	95	57.464	ENSMMUG00000021262	-	95	57.257	Macaca_mulatta
ENSCSEG00000003616	srp72	98	77.252	ENSMMUG00000016368	SRP72	97	77.182	Macaca_mulatta
ENSCSEG00000003616	srp72	97	77.301	ENSMNEG00000038065	-	97	77.504	Macaca_nemestrina
ENSCSEG00000003616	srp72	95	76.619	ENSMLEG00000030140	-	94	75.987	Mandrillus_leucophaeus
ENSCSEG00000003616	srp72	100	91.018	ENSMAMG00000014989	srp72	88	91.018	Mastacembelus_armatus
ENSCSEG00000003616	srp72	100	91.617	ENSMZEG00005003325	srp72	98	91.577	Maylandia_zebra
ENSCSEG00000003616	srp72	95	73.387	ENSMGAG00000008567	SRP72	97	76.872	Meleagris_gallopavo
ENSCSEG00000003616	srp72	99	76.667	ENSMAUG00000001237	Srp72	99	76.981	Mesocricetus_auratus
ENSCSEG00000003616	srp72	95	77.725	ENSMICG00000008507	-	94	77.603	Microcebus_murinus
ENSCSEG00000003616	srp72	99	76.497	ENSMOCG00000020309	Srp72	99	76.981	Microtus_ochrogaster
ENSCSEG00000003616	srp72	100	89.521	ENSMMOG00000002627	srp72	98	89.433	Mola_mola
ENSCSEG00000003616	srp72	96	73.250	ENSMODG00000020697	SRP72	99	73.353	Monodelphis_domestica
ENSCSEG00000003616	srp72	100	89.222	ENSMALG00000003747	srp72	100	88.907	Monopterus_albus
ENSCSEG00000003616	srp72	99	76.497	MGP_CAROLIEiJ_G0027323	Srp72	99	76.647	Mus_caroli
ENSCSEG00000003616	srp72	99	76.497	ENSMUSG00000036323	Srp72	99	76.647	Mus_musculus
ENSCSEG00000003616	srp72	99	76.958	MGP_PahariEiJ_G0017103	Srp72	99	76.946	Mus_pahari
ENSCSEG00000003616	srp72	99	76.497	MGP_SPRETEiJ_G0028317	Srp72	99	76.647	Mus_spretus
ENSCSEG00000003616	srp72	96	77.329	ENSMPUG00000004828	SRP72	97	77.658	Mustela_putorius_furo
ENSCSEG00000003616	srp72	96	77.054	ENSMLUG00000007344	SRP72	99	77.130	Myotis_lucifugus
ENSCSEG00000003616	srp72	100	77.530	ENSNGAG00000012595	Srp72	100	79.345	Nannospalax_galili
ENSCSEG00000003616	srp72	100	87.725	ENSNBRG00000014492	srp72	98	87.136	Neolamprologus_brichardi
ENSCSEG00000003616	srp72	97	72.393	ENSNLEG00000008806	-	99	72.305	Nomascus_leucogenys
ENSCSEG00000003616	srp72	96	66.874	ENSMEUG00000005164	SRP72	86	76.404	Notamacropus_eugenii
ENSCSEG00000003616	srp72	96	76.242	ENSOPRG00000012521	SRP72	99	76.198	Ochotona_princeps
ENSCSEG00000003616	srp72	95	76.973	ENSODEG00000012214	SRP72	96	77.237	Octodon_degus
ENSCSEG00000003616	srp72	100	91.766	ENSONIG00000001446	srp72	97	91.846	Oreochromis_niloticus
ENSCSEG00000003616	srp72	97	61.927	ENSOANG00000008562	SRP72	96	61.985	Ornithorhynchus_anatinus
ENSCSEG00000003616	srp72	97	77.147	ENSOCUG00000012226	SRP72	97	77.335	Oryctolagus_cuniculus
ENSCSEG00000003616	srp72	100	85.329	ENSORLG00000020418	srp72	99	85.629	Oryzias_latipes
ENSCSEG00000003616	srp72	100	84.880	ENSORLG00020009138	srp72	97	85.180	Oryzias_latipes_hni
ENSCSEG00000003616	srp72	100	85.180	ENSORLG00015018251	srp72	99	85.479	Oryzias_latipes_hsok
ENSCSEG00000003616	srp72	100	85.629	ENSOMEG00000022008	srp72	98	86.983	Oryzias_melastigma
ENSCSEG00000003616	srp72	97	77.454	ENSOGAG00000003578	SRP72	97	77.812	Otolemur_garnettii
ENSCSEG00000003616	srp72	97	76.840	ENSOARG00000004329	SRP72	97	77.042	Ovis_aries
ENSCSEG00000003616	srp72	82	61.754	ENSPPAG00000032490	-	91	61.667	Pan_paniscus
ENSCSEG00000003616	srp72	99	55.053	ENSPPAG00000011428	-	95	55.725	Pan_paniscus
ENSCSEG00000003616	srp72	97	77.454	ENSPPAG00000042265	SRP72	99	77.246	Pan_paniscus
ENSCSEG00000003616	srp72	96	77.640	ENSPPRG00000015991	SRP72	97	77.658	Panthera_pardus
ENSCSEG00000003616	srp72	96	77.640	ENSPTIG00000018786	SRP72	97	77.658	Panthera_tigris_altaica
ENSCSEG00000003616	srp72	82	61.567	ENSPTRG00000043609	-	96	58.997	Pan_troglodytes
ENSCSEG00000003616	srp72	99	56.863	ENSPTRG00000048100	-	95	57.557	Pan_troglodytes
ENSCSEG00000003616	srp72	97	77.454	ENSPTRG00000048466	-	99	77.246	Pan_troglodytes
ENSCSEG00000003616	srp72	95	62.240	ENSPANG00000030230	-	97	62.939	Papio_anubis
ENSCSEG00000003616	srp72	97	77.301	ENSPANG00000005495	SRP72	97	77.504	Papio_anubis
ENSCSEG00000003616	srp72	95	77.316	ENSPSIG00000003003	SRP72	100	77.259	Pelodiscus_sinensis
ENSCSEG00000003616	srp72	99	76.667	ENSPEMG00000012828	-	99	76.981	Peromyscus_maniculatus_bairdii
ENSCSEG00000003616	srp72	97	76.352	ENSPCIG00000000732	SRP72	99	76.198	Phascolarctos_cinereus
ENSCSEG00000003616	srp72	100	89.836	ENSPFOG00000003480	srp72	98	89.755	Poecilia_formosa
ENSCSEG00000003616	srp72	100	89.836	ENSPLAG00000020122	srp72	98	89.755	Poecilia_latipinna
ENSCSEG00000003616	srp72	100	89.686	ENSPMEG00000019988	srp72	98	89.602	Poecilia_mexicana
ENSCSEG00000003616	srp72	100	89.985	ENSPREG00000006218	srp72	98	89.908	Poecilia_reticulata
ENSCSEG00000003616	srp72	58	63.446	ENSPPYG00000009152	-	96	64.323	Pongo_abelii
ENSCSEG00000003616	srp72	98	77.287	ENSPPYG00000014752	-	76	77.489	Pongo_abelii
ENSCSEG00000003616	srp72	97	75.767	ENSPVAG00000005590	SRP72	97	76.271	Pteropus_vampyrus
ENSCSEG00000003616	srp72	100	91.467	ENSPNYG00000001916	srp72	98	91.424	Pundamilia_nyererei
ENSCSEG00000003616	srp72	100	84.454	ENSPNAG00000022424	srp72	98	84.251	Pygocentrus_nattereri
ENSCSEG00000003616	srp72	99	75.000	ENSRNOG00000002100	LOC108348180	99	75.599	Rattus_norvegicus
ENSCSEG00000003616	srp72	99	60.150	ENSRBIG00000029328	-	98	60.481	Rhinopithecus_bieti
ENSCSEG00000003616	srp72	97	72.811	ENSRBIG00000042069	SRP72	98	73.323	Rhinopithecus_bieti
ENSCSEG00000003616	srp72	97	77.301	ENSRROG00000035704	SRP72	97	77.504	Rhinopithecus_roxellana
ENSCSEG00000003616	srp72	95	76.452	ENSSHAG00000000614	SRP72	96	75.655	Sarcophilus_harrisii
ENSCSEG00000003616	srp72	100	83.109	ENSSFOG00015002026	srp72	98	83.333	Scleropages_formosus
ENSCSEG00000003616	srp72	100	88.674	ENSSMAG00000007639	srp72	98	89.787	Scophthalmus_maximus
ENSCSEG00000003616	srp72	100	92.515	ENSSDUG00000007345	srp72	96	92.462	Seriola_dumerili
ENSCSEG00000003616	srp72	100	92.665	ENSSLDG00000021819	srp72	98	91.385	Seriola_lalandi_dorsalis
ENSCSEG00000003616	srp72	64	89.189	ENSSARG00000005804	SRP72	65	89.189	Sorex_araneus
ENSCSEG00000003616	srp72	96	77.294	ENSSPUG00000009740	SRP72	97	77.182	Sphenodon_punctatus
ENSCSEG00000003616	srp72	100	91.766	ENSSPAG00000011565	srp72	98	91.730	Stegastes_partitus
ENSCSEG00000003616	srp72	99	74.699	ENSSSCG00000008900	SRP72	97	74.732	Sus_scrofa
ENSCSEG00000003616	srp72	96	77.984	ENSTGUG00000004767	SRP72	99	77.164	Taeniopygia_guttata
ENSCSEG00000003616	srp72	98	87.443	ENSTRUG00000009831	srp72	98	87.443	Takifugu_rubripes
ENSCSEG00000003616	srp72	100	87.874	ENSTNIG00000013073	srp72	97	87.846	Tetraodon_nigroviridis
ENSCSEG00000003616	srp72	88	65.789	ENSTBEG00000007394	SRP72	90	65.789	Tupaia_belangeri
ENSCSEG00000003616	srp72	94	76.737	ENSTTRG00000010945	SRP72	100	76.693	Tursiops_truncatus
ENSCSEG00000003616	srp72	59	77.403	ENSUAMG00000001701	SRP72	100	77.428	Ursus_americanus
ENSCSEG00000003616	srp72	96	77.329	ENSUMAG00000008151	SRP72	99	77.246	Ursus_maritimus
ENSCSEG00000003616	srp72	97	76.074	ENSVPAG00000000458	SRP72	97	76.271	Vicugna_pacos
ENSCSEG00000003616	srp72	97	77.301	ENSVVUG00000006020	SRP72	99	77.545	Vulpes_vulpes
ENSCSEG00000003616	srp72	97	73.783	ENSXETG00000010205	srp72	100	73.783	Xenopus_tropicalis
ENSCSEG00000003616	srp72	100	89.686	ENSXMAG00000018000	srp72	97	89.352	Xiphophorus_maculatus