EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000003629 (Gene tree)
Gene ID: 103389401
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2145 bases
Position: chr14:6746651-6748795
Accession: 103389401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000005621	PseudoU_synth_1	PF01416.20	1.9e-15	1	1
ENSCSEP00000005624	PseudoU_synth_1	PF01416.20	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005684	-	1614	-	ENSCSEP00000005624	450 (aa)	-	-
ENSCSET00000005681	-	1524	XM_008324791	ENSCSEP00000005621	420 (aa)	XP_008323013	UPI000495E023

Gene Model

Click here to download ENSCSEG00000003629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003629	pus1	80	69.527	ENSG00000177192	PUS1	88	69.527	Homo_sapiens
ENSCSEG00000003629	pus1	100	77.910	ENSAPOG00000007254	pus1	100	77.910	Acanthochromis_polyacanthus
ENSCSEG00000003629	pus1	90	64.286	ENSAMEG00000013715	PUS1	90	64.286	Ailuropoda_melanoleuca
ENSCSEG00000003629	pus1	95	76.322	ENSACIG00000009169	pus1	96	76.322	Amphilophus_citrinellus
ENSCSEG00000003629	pus1	100	78.147	ENSAOCG00000022207	pus1	100	78.147	Amphiprion_ocellaris
ENSCSEG00000003629	pus1	100	78.147	ENSAPEG00000006039	pus1	99	80.563	Amphiprion_percula
ENSCSEG00000003629	pus1	93	77.749	ENSATEG00000020688	pus1	100	77.749	Anabas_testudineus
ENSCSEG00000003629	pus1	86	67.751	ENSACAG00000007367	PUS1	99	67.751	Anolis_carolinensis
ENSCSEG00000003629	pus1	77	67.802	ENSANAG00000036192	PUS1	99	67.802	Aotus_nancymaae
ENSCSEG00000003629	pus1	100	76.485	ENSACLG00000020868	pus1	100	78.772	Astatotilapia_calliptera
ENSCSEG00000003629	pus1	93	69.231	ENSAMXG00000008710	pus1	88	70.341	Astyanax_mexicanus
ENSCSEG00000003629	pus1	82	69.096	ENSBTAG00000012990	PUS1	86	68.786	Bos_taurus
ENSCSEG00000003629	pus1	85	37.333	WBGene00004248	pus-1	88	37.368	Caenorhabditis_elegans
ENSCSEG00000003629	pus1	60	68.504	ENSCJAG00000003720	PUS1	70	68.093	Callithrix_jacchus
ENSCSEG00000003629	pus1	85	66.197	ENSCAFG00000006429	PUS1	88	66.857	Canis_familiaris
ENSCSEG00000003629	pus1	85	66.197	ENSCAFG00020010737	PUS1	82	66.197	Canis_lupus_dingo
ENSCSEG00000003629	pus1	82	68.895	ENSCHIG00000000487	PUS1	86	68.786	Capra_hircus
ENSCSEG00000003629	pus1	85	66.574	ENSTSYG00000032605	PUS1	99	65.761	Carlito_syrichta
ENSCSEG00000003629	pus1	71	70.234	ENSCAPG00000006421	PUS1	93	69.868	Cavia_aperea
ENSCSEG00000003629	pus1	80	69.254	ENSCPOG00000001027	PUS1	81	68.406	Cavia_porcellus
ENSCSEG00000003629	pus1	80	69.254	ENSCCAG00000015879	PUS1	84	69.737	Cebus_capucinus
ENSCSEG00000003629	pus1	80	69.527	ENSCATG00000032870	PUS1	83	70.395	Cercocebus_atys
ENSCSEG00000003629	pus1	88	64.130	ENSCLAG00000011689	PUS1	87	63.881	Chinchilla_lanigera
ENSCSEG00000003629	pus1	80	69.231	ENSCSAG00000001879	PUS1	79	69.231	Chlorocebus_sabaeus
ENSCSEG00000003629	pus1	75	70.159	ENSCPBG00000024715	PUS1	93	68.502	Chrysemys_picta_bellii
ENSCSEG00000003629	pus1	81	44.798	ENSCING00000009426	-	92	44.798	Ciona_intestinalis
ENSCSEG00000003629	pus1	91	41.406	ENSCSAVG00000003751	-	78	40.852	Ciona_savignyi
ENSCSEG00000003629	pus1	85	60.446	ENSCANG00000035561	PUS1	89	61.585	Colobus_angolensis_palliatus
ENSCSEG00000003629	pus1	92	64.872	ENSCGRG00001019592	Pus1	92	64.872	Cricetulus_griseus_chok1gshd
ENSCSEG00000003629	pus1	92	64.872	ENSCGRG00000004048	Pus1	99	64.872	Cricetulus_griseus_crigri
ENSCSEG00000003629	pus1	100	76.247	ENSCVAG00000001265	pus1	100	76.247	Cyprinodon_variegatus
ENSCSEG00000003629	pus1	99	64.269	ENSDARG00000045562	pus1	96	73.704	Danio_rerio
ENSCSEG00000003629	pus1	81	68.513	ENSDNOG00000045576	PUS1	94	70.130	Dasypus_novemcinctus
ENSCSEG00000003629	pus1	72	70.861	ENSDORG00000011455	Pus1	92	70.861	Dipodomys_ordii
ENSCSEG00000003629	pus1	93	42.308	FBgn0038811	PUS1	93	42.308	Drosophila_melanogaster
ENSCSEG00000003629	pus1	81	69.027	ENSETEG00000019160	PUS1	83	68.622	Echinops_telfairi
ENSCSEG00000003629	pus1	80	43.820	ENSEBUG00000000368	-	68	42.896	Eptatretus_burgeri
ENSCSEG00000003629	pus1	82	67.826	ENSEASG00005016535	PUS1	81	67.529	Equus_asinus_asinus
ENSCSEG00000003629	pus1	82	67.826	ENSECAG00000006965	PUS1	87	67.529	Equus_caballus
ENSCSEG00000003629	pus1	94	70.101	ENSELUG00000010424	pus1	96	72.679	Esox_lucius
ENSCSEG00000003629	pus1	87	65.934	ENSFCAG00000010780	PUS1	85	65.934	Felis_catus
ENSCSEG00000003629	pus1	90	66.324	ENSFALG00000008273	PUS1	91	66.324	Ficedula_albicollis
ENSCSEG00000003629	pus1	80	68.732	ENSFDAG00000012518	PUS1	90	64.439	Fukomys_damarensis
ENSCSEG00000003629	pus1	100	76.540	ENSFHEG00000010504	pus1	100	76.540	Fundulus_heteroclitus
ENSCSEG00000003629	pus1	94	73.028	ENSGMOG00000008143	pus1	99	73.028	Gadus_morhua
ENSCSEG00000003629	pus1	93	65.915	ENSGALG00000002354	PUS1	97	65.915	Gallus_gallus
ENSCSEG00000003629	pus1	100	75.059	ENSGAFG00000006578	pus1	100	75.059	Gambusia_affinis
ENSCSEG00000003629	pus1	100	73.995	ENSGACG00000017566	pus1	99	76.336	Gasterosteus_aculeatus
ENSCSEG00000003629	pus1	78	66.768	ENSGAGG00000016730	-	94	66.768	Gopherus_agassizii
ENSCSEG00000003629	pus1	60	30.249	ENSGAGG00000000160	PUS3	51	30.249	Gopherus_agassizii
ENSCSEG00000003629	pus1	84	67.521	ENSGGOG00000009178	PUS1	81	70.724	Gorilla_gorilla
ENSCSEG00000003629	pus1	100	76.960	ENSHBUG00000001316	pus1	100	79.284	Haplochromis_burtoni
ENSCSEG00000003629	pus1	85	63.687	ENSHGLG00000016086	PUS1	91	63.687	Heterocephalus_glaber_female
ENSCSEG00000003629	pus1	85	63.408	ENSHGLG00100019362	PUS1	91	63.408	Heterocephalus_glaber_male
ENSCSEG00000003629	pus1	100	71.021	ENSHCOG00000014288	pus1	96	71.021	Hippocampus_comes
ENSCSEG00000003629	pus1	100	67.765	ENSIPUG00000010387	pus1	100	67.765	Ictalurus_punctatus
ENSCSEG00000003629	pus1	80	70.414	ENSSTOG00000011245	PUS1	84	67.409	Ictidomys_tridecemlineatus
ENSCSEG00000003629	pus1	85	66.574	ENSJJAG00000000088	Pus1	85	66.574	Jaculus_jaculus
ENSCSEG00000003629	pus1	100	69.976	ENSKMAG00000012702	pus1	100	69.976	Kryptolebias_marmoratus
ENSCSEG00000003629	pus1	95	74.627	ENSLBEG00000002845	pus1	99	74.627	Labrus_bergylta
ENSCSEG00000003629	pus1	77	56.211	ENSLACG00000016044	-	97	56.211	Latimeria_chalumnae
ENSCSEG00000003629	pus1	86	64.835	ENSLACG00000018598	PUS1	97	61.954	Latimeria_chalumnae
ENSCSEG00000003629	pus1	90	68.947	ENSLOCG00000006127	pus1	96	68.947	Lepisosteus_oculatus
ENSCSEG00000003629	pus1	86	66.111	ENSLAFG00000028731	PUS1	96	66.111	Loxodonta_africana
ENSCSEG00000003629	pus1	80	69.231	ENSMFAG00000041194	PUS1	84	69.231	Macaca_fascicularis
ENSCSEG00000003629	pus1	80	69.231	ENSMMUG00000031463	PUS1	87	70.066	Macaca_mulatta
ENSCSEG00000003629	pus1	80	69.231	ENSMNEG00000002814	PUS1	83	70.066	Macaca_nemestrina
ENSCSEG00000003629	pus1	72	70.199	ENSMLEG00000043560	PUS1	92	70.199	Mandrillus_leucophaeus
ENSCSEG00000003629	pus1	100	74.584	ENSMAMG00000007371	pus1	100	74.584	Mastacembelus_armatus
ENSCSEG00000003629	pus1	100	76.485	ENSMZEG00005017746	pus1	100	76.485	Maylandia_zebra
ENSCSEG00000003629	pus1	77	70.427	ENSMGAG00000001958	PUS1	99	70.427	Meleagris_gallopavo
ENSCSEG00000003629	pus1	59	31.461	ENSMGAG00000000851	PUS3	63	31.461	Meleagris_gallopavo
ENSCSEG00000003629	pus1	92	64.615	ENSMAUG00000001482	Pus1	92	64.615	Mesocricetus_auratus
ENSCSEG00000003629	pus1	85	64.343	ENSMICG00000030980	PUS1	90	65.934	Microcebus_murinus
ENSCSEG00000003629	pus1	85	68.245	ENSMOCG00000022311	Pus1	84	68.245	Microtus_ochrogaster
ENSCSEG00000003629	pus1	93	73.077	ENSMMOG00000021022	pus1	99	73.077	Mola_mola
ENSCSEG00000003629	pus1	79	69.760	ENSMODG00000015551	PUS1	79	67.898	Monodelphis_domestica
ENSCSEG00000003629	pus1	99	74.524	ENSMALG00000013202	pus1	99	74.524	Monopterus_albus
ENSCSEG00000003629	pus1	92	64.872	MGP_CAROLIEiJ_G0027551	Pus1	91	68.245	Mus_caroli
ENSCSEG00000003629	pus1	92	64.872	ENSMUSG00000029507	Pus1	91	68.245	Mus_musculus
ENSCSEG00000003629	pus1	87	67.397	MGP_PahariEiJ_G0024133	Pus1	92	67.397	Mus_pahari
ENSCSEG00000003629	pus1	92	64.872	MGP_SPRETEiJ_G0028549	Pus1	91	68.245	Mus_spretus
ENSCSEG00000003629	pus1	79	70.181	ENSMPUG00000002314	PUS1	84	70.181	Mustela_putorius_furo
ENSCSEG00000003629	pus1	85	64.804	ENSMLUG00000015790	PUS1	98	64.804	Myotis_lucifugus
ENSCSEG00000003629	pus1	85	67.967	ENSNGAG00000012976	Pus1	84	67.967	Nannospalax_galili
ENSCSEG00000003629	pus1	93	78.974	ENSNBRG00000020502	pus1	99	80.697	Neolamprologus_brichardi
ENSCSEG00000003629	pus1	80	67.456	ENSNLEG00000008505	PUS1	92	70.307	Nomascus_leucogenys
ENSCSEG00000003629	pus1	78	65.138	ENSMEUG00000002825	PUS1	89	65.138	Notamacropus_eugenii
ENSCSEG00000003629	pus1	85	60.674	ENSOPRG00000002701	-	92	60.674	Ochotona_princeps
ENSCSEG00000003629	pus1	85	66.387	ENSODEG00000008248	PUS1	95	65.312	Octodon_degus
ENSCSEG00000003629	pus1	93	77.834	ENSONIG00000003803	pus1	100	77.834	Oreochromis_niloticus
ENSCSEG00000003629	pus1	95	62.530	ENSOANG00000010619	PUS1	94	62.530	Ornithorhynchus_anatinus
ENSCSEG00000003629	pus1	80	69.254	ENSOCUG00000007310	PUS1	73	68.639	Oryctolagus_cuniculus
ENSCSEG00000003629	pus1	100	75.829	ENSORLG00000010787	pus1	100	75.829	Oryzias_latipes
ENSCSEG00000003629	pus1	100	75.118	ENSORLG00020011483	pus1	100	75.118	Oryzias_latipes_hni
ENSCSEG00000003629	pus1	100	75.355	ENSORLG00015023012	pus1	99	77.692	Oryzias_latipes_hsok
ENSCSEG00000003629	pus1	98	74.696	ENSOMEG00000022655	pus1	96	74.757	Oryzias_melastigma
ENSCSEG00000003629	pus1	80	69.254	ENSOGAG00000008720	PUS1	87	68.935	Otolemur_garnettii
ENSCSEG00000003629	pus1	82	68.805	ENSOARG00000013316	PUS1	79	68.805	Ovis_aries
ENSCSEG00000003629	pus1	80	69.231	ENSPPAG00000040971	PUS1	81	70.066	Pan_paniscus
ENSCSEG00000003629	pus1	86	66.116	ENSPPRG00000015456	PUS1	91	66.116	Panthera_pardus
ENSCSEG00000003629	pus1	80	68.935	ENSPTIG00000004201	PUS1	90	67.723	Panthera_tigris_altaica
ENSCSEG00000003629	pus1	80	69.231	ENSPTRG00000005643	PUS1	81	70.066	Pan_troglodytes
ENSCSEG00000003629	pus1	80	69.231	ENSPANG00000000376	PUS1	83	70.066	Papio_anubis
ENSCSEG00000003629	pus1	91	64.433	ENSPKIG00000019369	pus1	93	62.287	Paramormyrops_kingsleyae
ENSCSEG00000003629	pus1	88	67.568	ENSPSIG00000016432	PUS1	89	66.142	Pelodiscus_sinensis
ENSCSEG00000003629	pus1	94	71.899	ENSPMGG00000004522	pus1	98	74.084	Periophthalmus_magnuspinnatus
ENSCSEG00000003629	pus1	85	67.967	ENSPEMG00000013448	Pus1	85	67.967	Peromyscus_maniculatus_bairdii
ENSCSEG00000003629	pus1	78	58.055	ENSPMAG00000004636	pus1	99	58.055	Petromyzon_marinus
ENSCSEG00000003629	pus1	72	61.842	ENSPCIG00000022609	-	73	61.364	Phascolarctos_cinereus
ENSCSEG00000003629	pus1	100	74.584	ENSPFOG00000019669	pus1	100	74.584	Poecilia_formosa
ENSCSEG00000003629	pus1	100	74.347	ENSPLAG00000002692	-	100	74.347	Poecilia_latipinna
ENSCSEG00000003629	pus1	100	74.347	ENSPLAG00000007185	pus1	100	74.347	Poecilia_latipinna
ENSCSEG00000003629	pus1	98	74.696	ENSPMEG00000006038	pus1	98	76.322	Poecilia_mexicana
ENSCSEG00000003629	pus1	100	74.347	ENSPMEG00000011115	PUS1	100	74.347	Poecilia_mexicana
ENSCSEG00000003629	pus1	94	75.253	ENSPREG00000007231	pus1	99	78.212	Poecilia_reticulata
ENSCSEG00000003629	pus1	80	69.822	ENSPPYG00000005132	PUS1	79	69.822	Pongo_abelii
ENSCSEG00000003629	pus1	61	64.591	ENSPCAG00000009110	-	62	64.591	Procavia_capensis
ENSCSEG00000003629	pus1	76	67.085	ENSPCOG00000015595	PUS1	82	63.609	Propithecus_coquereli
ENSCSEG00000003629	pus1	100	76.485	ENSPNYG00000013571	pus1	100	76.485	Pundamilia_nyererei
ENSCSEG00000003629	pus1	93	69.666	ENSPNAG00000003938	pus1	91	69.666	Pygocentrus_nattereri
ENSCSEG00000003629	pus1	92	64.615	ENSRNOG00000037500	Pus1	92	64.615	Rattus_norvegicus
ENSCSEG00000003629	pus1	80	69.527	ENSRBIG00000043177	PUS1	84	70.395	Rhinopithecus_bieti
ENSCSEG00000003629	pus1	80	69.527	ENSRROG00000039744	PUS1	82	70.357	Rhinopithecus_roxellana
ENSCSEG00000003629	pus1	79	41.045	YPL212C	-	60	41.045	Saccharomyces_cerevisiae
ENSCSEG00000003629	pus1	80	69.231	ENSSBOG00000023593	PUS1	86	69.767	Saimiri_boliviensis_boliviensis
ENSCSEG00000003629	pus1	85	68.539	ENSSHAG00000013193	PUS1	85	68.539	Sarcophilus_harrisii
ENSCSEG00000003629	pus1	82	72.334	ENSSFOG00015003463	pus1	83	70.685	Scleropages_formosus
ENSCSEG00000003629	pus1	100	76.722	ENSSMAG00000019075	pus1	100	76.722	Scophthalmus_maximus
ENSCSEG00000003629	pus1	100	76.722	ENSSDUG00000007102	pus1	100	76.722	Seriola_dumerili
ENSCSEG00000003629	pus1	100	76.247	ENSSLDG00000022850	pus1	100	76.247	Seriola_lalandi_dorsalis
ENSCSEG00000003629	pus1	71	63.211	ENSSARG00000008367	PUS1	96	63.211	Sorex_araneus
ENSCSEG00000003629	pus1	96	62.927	ENSSPUG00000010009	PUS1	99	62.927	Sphenodon_punctatus
ENSCSEG00000003629	pus1	93	79.028	ENSSPAG00000006272	pus1	99	79.028	Stegastes_partitus
ENSCSEG00000003629	pus1	86	65.395	ENSSSCG00000009741	PUS1	91	65.395	Sus_scrofa
ENSCSEG00000003629	pus1	78	73.780	ENSTGUG00000008068	PUS1	99	73.780	Taeniopygia_guttata
ENSCSEG00000003629	pus1	90	73.210	ENSTRUG00000002198	pus1	92	75.630	Takifugu_rubripes
ENSCSEG00000003629	pus1	90	70.619	ENSTNIG00000003942	pus1	97	71.649	Tetraodon_nigroviridis
ENSCSEG00000003629	pus1	86	65.833	ENSTTRG00000000632	PUS1	85	65.833	Tursiops_truncatus
ENSCSEG00000003629	pus1	82	68.314	ENSUAMG00000017197	PUS1	87	68.314	Ursus_americanus
ENSCSEG00000003629	pus1	82	68.605	ENSUMAG00000002831	PUS1	95	70.662	Ursus_maritimus
ENSCSEG00000003629	pus1	82	68.513	ENSVVUG00000004199	PUS1	78	68.513	Vulpes_vulpes
ENSCSEG00000003629	pus1	76	51.703	ENSXETG00000033640	-	100	51.385	Xenopus_tropicalis
ENSCSEG00000003629	pus1	87	66.484	ENSXETG00000002030	pus1	91	65.489	Xenopus_tropicalis
ENSCSEG00000003629	pus1	94	77.273	ENSXCOG00000004722	pus1	98	78.421	Xiphophorus_couchianus
ENSCSEG00000003629	pus1	100	75.297	ENSXMAG00000000988	pus1	100	75.297	Xiphophorus_maculatus