EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000003646 (Gene tree)
Gene ID: -
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 28004 bases
Position: chr6:9636914-9664917
Accession: 103380065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000005671	ResIII	PF04851.15	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005732	-	5094	XM_017033070	ENSCSEP00000005671	1697 (aa)	XP_016888559	-

Gene Model

Click here to download ENSCSEG00000003646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000003646	chd2	79	55.757	ENSCSEG00000009553	chd1	92	54.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003646	chd2	93	66.316	ENSG00000173575	CHD2	96	70.282	Homo_sapiens
ENSCSEG00000003646	chd2	95	95.294	ENSAPOG00000008913	chd2	94	93.878	Acanthochromis_polyacanthus
ENSCSEG00000003646	chd2	55	69.989	ENSAMEG00000010805	-	89	69.775	Ailuropoda_melanoleuca
ENSCSEG00000003646	chd2	95	95.349	ENSAOCG00000016332	chd2	98	77.209	Amphiprion_ocellaris
ENSCSEG00000003646	chd2	95	95.349	ENSAPEG00000016676	chd2	100	77.884	Amphiprion_percula
ENSCSEG00000003646	chd2	95	96.471	ENSATEG00000005246	chd2	95	93.939	Anabas_testudineus
ENSCSEG00000003646	chd2	95	69.149	ENSAPLG00000011141	-	94	69.474	Anas_platyrhynchos
ENSCSEG00000003646	chd2	96	62.317	ENSACAG00000000088	-	97	62.336	Anolis_carolinensis
ENSCSEG00000003646	chd2	94	66.038	ENSANAG00000024017	-	98	63.959	Aotus_nancymaae
ENSCSEG00000003646	chd2	98	77.286	ENSACLG00000021370	chd2	100	77.590	Astatotilapia_calliptera
ENSCSEG00000003646	chd2	93	66.316	ENSCJAG00000020444	-	93	66.318	Callithrix_jacchus
ENSCSEG00000003646	chd2	94	68.425	ENSCAFG00000010998	CHD2	94	69.411	Canis_familiaris
ENSCSEG00000003646	chd2	94	65.686	ENSCHIG00000022261	-	99	62.874	Capra_hircus
ENSCSEG00000003646	chd2	94	66.038	ENSTSYG00000003272	-	92	68.414	Carlito_syrichta
ENSCSEG00000003646	chd2	89	67.379	ENSCPOG00000005800	-	93	67.961	Cavia_porcellus
ENSCSEG00000003646	chd2	94	65.421	ENSCCAG00000035304	-	98	63.959	Cebus_capucinus
ENSCSEG00000003646	chd2	93	66.316	ENSCATG00000031069	-	93	66.523	Cercocebus_atys
ENSCSEG00000003646	chd2	94	65.581	ENSCLAG00000016269	-	93	66.215	Chinchilla_lanigera
ENSCSEG00000003646	chd2	93	66.316	ENSCSAG00000017007	-	93	66.585	Chlorocebus_sabaeus
ENSCSEG00000003646	chd2	70	68.780	ENSCHOG00000000608	-	74	68.966	Choloepus_hoffmanni
ENSCSEG00000003646	chd2	80	69.406	ENSCPBG00000018049	-	95	73.389	Chrysemys_picta_bellii
ENSCSEG00000003646	chd2	74	48.789	ENSCSAVG00000007580	-	94	54.114	Ciona_savignyi
ENSCSEG00000003646	chd2	94	66.038	ENSCANG00000038126	-	93	66.523	Colobus_angolensis_palliatus
ENSCSEG00000003646	chd2	93	66.316	ENSCGRG00001006649	Chd2	98	63.439	Cricetulus_griseus_chok1gshd
ENSCSEG00000003646	chd2	93	66.316	ENSCGRG00000018154	Chd2	98	63.439	Cricetulus_griseus_crigri
ENSCSEG00000003646	chd2	96	89.908	ENSCVAG00000002427	chd2	98	72.158	Cyprinodon_variegatus
ENSCSEG00000003646	chd2	92	79.747	ENSDARG00000060687	chd2	98	72.625	Danio_rerio
ENSCSEG00000003646	chd2	93	66.236	ENSDNOG00000009796	-	93	66.544	Dasypus_novemcinctus
ENSCSEG00000003646	chd2	52	74.468	ENSEBUG00000014994	chd2	80	75.000	Eptatretus_burgeri
ENSCSEG00000003646	chd2	91	75.510	ENSEASG00005015526	-	98	69.478	Equus_asinus_asinus
ENSCSEG00000003646	chd2	92	100.000	ENSELUG00000017981	chd2	98	71.884	Esox_lucius
ENSCSEG00000003646	chd2	90	80.769	ENSFALG00000010369	-	93	69.474	Ficedula_albicollis
ENSCSEG00000003646	chd2	94	65.827	ENSFDAG00000020651	-	93	66.400	Fukomys_damarensis
ENSCSEG00000003646	chd2	93	86.207	ENSFHEG00000002119	chd2	97	85.714	Fundulus_heteroclitus
ENSCSEG00000003646	chd2	90	83.838	ENSGMOG00000002890	chd2	97	72.130	Gadus_morhua
ENSCSEG00000003646	chd2	93	69.149	ENSGALG00000006949	CHD2	93	69.474	Gallus_gallus
ENSCSEG00000003646	chd2	96	84.821	ENSGAFG00000001905	chd2	97	88.660	Gambusia_affinis
ENSCSEG00000003646	chd2	90	86.047	ENSGACG00000013246	chd2	97	76.443	Gasterosteus_aculeatus
ENSCSEG00000003646	chd2	79	70.714	ENSGAGG00000013176	-	95	84.706	Gopherus_agassizii
ENSCSEG00000003646	chd2	94	66.038	ENSGGOG00000015677	CHD2	94	65.049	Gorilla_gorilla
ENSCSEG00000003646	chd2	95	96.512	ENSHBUG00000017947	chd2	100	77.690	Haplochromis_burtoni
ENSCSEG00000003646	chd2	94	65.683	ENSHGLG00000004435	CHD2	93	66.318	Heterocephalus_glaber_female
ENSCSEG00000003646	chd2	94	65.252	ENSHGLG00100016376	-	93	65.764	Heterocephalus_glaber_male
ENSCSEG00000003646	chd2	94	75.893	ENSHCOG00000008855	chd2	95	76.471	Hippocampus_comes
ENSCSEG00000003646	chd2	99	68.880	ENSIPUG00000000488	chd2	100	70.331	Ictalurus_punctatus
ENSCSEG00000003646	chd2	93	66.316	ENSSTOG00000001270	-	93	66.585	Ictidomys_tridecemlineatus
ENSCSEG00000003646	chd2	94	66.052	ENSJJAG00000000213	Chd2	98	63.144	Jaculus_jaculus
ENSCSEG00000003646	chd2	82	77.815	ENSKMAG00000015849	chd2	99	78.716	Kryptolebias_marmoratus
ENSCSEG00000003646	chd2	66	76.923	ENSLAFG00000016885	-	98	72.216	Loxodonta_africana
ENSCSEG00000003646	chd2	94	66.038	ENSMFAG00000033343	-	93	66.585	Macaca_fascicularis
ENSCSEG00000003646	chd2	93	66.316	ENSMMUG00000011782	-	93	66.585	Macaca_mulatta
ENSCSEG00000003646	chd2	93	66.316	ENSMNEG00000036875	-	93	66.318	Macaca_nemestrina
ENSCSEG00000003646	chd2	93	66.316	ENSMLEG00000035026	-	93	66.585	Mandrillus_leucophaeus
ENSCSEG00000003646	chd2	95	92.941	ENSMAMG00000009082	chd2	100	78.503	Mastacembelus_armatus
ENSCSEG00000003646	chd2	98	77.286	ENSMZEG00005021333	chd2	100	77.603	Maylandia_zebra
ENSCSEG00000003646	chd2	94	68.269	ENSMGAG00000008966	-	94	69.474	Meleagris_gallopavo
ENSCSEG00000003646	chd2	94	66.038	ENSMICG00000000332	-	94	65.640	Microcebus_murinus
ENSCSEG00000003646	chd2	93	66.316	ENSMOCG00000015124	Chd2	98	63.557	Microtus_ochrogaster
ENSCSEG00000003646	chd2	99	63.706	ENSMODG00000013158	-	98	64.332	Monodelphis_domestica
ENSCSEG00000003646	chd2	98	79.174	ENSMALG00000007755	chd2	98	79.696	Monopterus_albus
ENSCSEG00000003646	chd2	93	66.316	MGP_CAROLIEiJ_G0029860	Chd2	98	63.884	Mus_caroli
ENSCSEG00000003646	chd2	94	65.785	ENSMUSG00000078671	Chd2	98	63.904	Mus_musculus
ENSCSEG00000003646	chd2	93	66.195	MGP_PahariEiJ_G0013082	Chd2	98	63.527	Mus_pahari
ENSCSEG00000003646	chd2	93	66.316	MGP_SPRETEiJ_G0030962	Chd2	98	63.904	Mus_spretus
ENSCSEG00000003646	chd2	93	66.316	ENSMPUG00000017577	-	98	63.212	Mustela_putorius_furo
ENSCSEG00000003646	chd2	94	68.160	ENSMLUG00000009292	-	93	65.201	Myotis_lucifugus
ENSCSEG00000003646	chd2	93	66.316	ENSNGAG00000010792	Chd2	98	63.275	Nannospalax_galili
ENSCSEG00000003646	chd2	98	78.236	ENSNBRG00000020591	chd2	100	78.596	Neolamprologus_brichardi
ENSCSEG00000003646	chd2	93	66.316	ENSNLEG00000012349	-	94	65.049	Nomascus_leucogenys
ENSCSEG00000003646	chd2	67	69.841	ENSMEUG00000001522	-	71	69.645	Notamacropus_eugenii
ENSCSEG00000003646	chd2	94	65.496	ENSODEG00000016028	-	93	65.785	Octodon_degus
ENSCSEG00000003646	chd2	96	95.000	ENSONIG00000015136	chd2	98	78.856	Oreochromis_niloticus
ENSCSEG00000003646	chd2	86	63.285	ENSOANG00000004385	-	99	63.197	Ornithorhynchus_anatinus
ENSCSEG00000003646	chd2	92	62.318	ENSOCUG00000001628	-	88	77.338	Oryctolagus_cuniculus
ENSCSEG00000003646	chd2	95	92.941	ENSORLG00000008403	chd2	98	75.761	Oryzias_latipes
ENSCSEG00000003646	chd2	95	92.771	ENSORLG00020004138	chd2	98	75.434	Oryzias_latipes_hni
ENSCSEG00000003646	chd2	96	90.909	ENSOMEG00000005831	chd2	95	74.763	Oryzias_melastigma
ENSCSEG00000003646	chd2	93	66.155	ENSOGAG00000010399	-	93	66.605	Otolemur_garnettii
ENSCSEG00000003646	chd2	94	68.242	ENSOARG00000010343	-	93	68.520	Ovis_aries
ENSCSEG00000003646	chd2	94	66.038	ENSPPAG00000030381	-	98	63.178	Pan_paniscus
ENSCSEG00000003646	chd2	94	66.038	ENSPTRG00000007478	CHD2	93	66.585	Pan_troglodytes
ENSCSEG00000003646	chd2	93	66.316	ENSPANG00000033355	-	93	65.049	Papio_anubis
ENSCSEG00000003646	chd2	99	69.454	ENSPKIG00000000495	chd2	95	76.531	Paramormyrops_kingsleyae
ENSCSEG00000003646	chd2	83	74.589	ENSPMGG00000009941	chd2	99	74.984	Periophthalmus_magnuspinnatus
ENSCSEG00000003646	chd2	93	66.316	ENSPEMG00000019507	Chd2	93	66.502	Peromyscus_maniculatus_bairdii
ENSCSEG00000003646	chd2	88	67.425	ENSPCIG00000009417	-	99	71.072	Phascolarctos_cinereus
ENSCSEG00000003646	chd2	94	91.765	ENSPFOG00000007050	chd2	98	77.026	Poecilia_formosa
ENSCSEG00000003646	chd2	95	91.765	ENSPLAG00000005067	chd2	98	77.138	Poecilia_latipinna
ENSCSEG00000003646	chd2	94	91.765	ENSPMEG00000019628	chd2	98	77.222	Poecilia_mexicana
ENSCSEG00000003646	chd2	93	66.316	ENSPPYG00000006799	-	93	65.169	Pongo_abelii
ENSCSEG00000003646	chd2	94	66.038	ENSPCOG00000028084	-	93	66.481	Propithecus_coquereli
ENSCSEG00000003646	chd2	98	77.330	ENSPNYG00000010273	chd2	100	77.534	Pundamilia_nyererei
ENSCSEG00000003646	chd2	99	67.875	ENSPNAG00000016719	chd2	98	71.875	Pygocentrus_nattereri
ENSCSEG00000003646	chd2	94	66.981	ENSRNOG00000012716	Chd2	98	63.715	Rattus_norvegicus
ENSCSEG00000003646	chd2	94	65.714	ENSRBIG00000036875	-	94	65.049	Rhinopithecus_bieti
ENSCSEG00000003646	chd2	93	66.316	ENSRROG00000041087	-	93	66.585	Rhinopithecus_roxellana
ENSCSEG00000003646	chd2	94	66.038	ENSSBOG00000023754	-	93	66.564	Saimiri_boliviensis_boliviensis
ENSCSEG00000003646	chd2	93	66.687	ENSSHAG00000012513	-	98	63.681	Sarcophilus_harrisii
ENSCSEG00000003646	chd2	96	81.481	ENSSFOG00015023759	chd2	97	76.945	Scleropages_formosus
ENSCSEG00000003646	chd2	95	92.941	ENSSMAG00000001726	chd2	100	77.628	Scophthalmus_maximus
ENSCSEG00000003646	chd2	98	79.796	ENSSLDG00000001146	chd2	100	80.259	Seriola_lalandi_dorsalis
ENSCSEG00000003646	chd2	64	77.273	ENSSARG00000014112	-	67	79.070	Sorex_araneus
ENSCSEG00000003646	chd2	99	62.788	ENSSPUG00000011266	-	99	63.941	Sphenodon_punctatus
ENSCSEG00000003646	chd2	98	78.531	ENSSPAG00000016452	chd2	100	78.551	Stegastes_partitus
ENSCSEG00000003646	chd2	89	88.462	ENSSSCG00000002266	-	95	88.462	Sus_scrofa
ENSCSEG00000003646	chd2	91	80.769	ENSTGUG00000008540	-	98	62.691	Taeniopygia_guttata
ENSCSEG00000003646	chd2	83	78.764	ENSTRUG00000008842	chd2	89	76.471	Takifugu_rubripes
ENSCSEG00000003646	chd2	83	91.589	ENSTNIG00000010760	chd2	98	83.168	Tetraodon_nigroviridis
ENSCSEG00000003646	chd2	56	68.889	ENSTBEG00000017730	-	68	69.196	Tupaia_belangeri
ENSCSEG00000003646	chd2	84	88.462	ENSTTRG00000000430	-	85	88.462	Tursiops_truncatus
ENSCSEG00000003646	chd2	93	66.316	ENSUMAG00000000083	-	93	65.049	Ursus_maritimus
ENSCSEG00000003646	chd2	83	67.742	ENSVPAG00000009645	-	79	77.536	Vicugna_pacos
ENSCSEG00000003646	chd2	88	61.496	ENSXETG00000024129	chd2	98	61.633	Xenopus_tropicalis
ENSCSEG00000003646	chd2	95	90.476	ENSXCOG00000020255	chd2	99	90.722	Xiphophorus_couchianus
ENSCSEG00000003646	chd2	94	91.765	ENSXMAG00000002707	chd2	97	90.722	Xiphophorus_maculatus