EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000003773 (Gene tree)
Gene ID: 103389415
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 100944 bases
Position: chr14:7212203-7313146
Accession: 103389415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000005832	DRY_EERY	PF09750.9	6.2e-32	1	1
ENSCSEP00000005843	DRY_EERY	PF09750.9	1.3e-11	1	1
ENSCSEP00000005843	Surp	PF01805.20	4.7e-28	1	2
ENSCSEP00000005843	Surp	PF01805.20	4.7e-28	2	2
ENSCSEP00000005832	Surp	PF01805.20	5.2e-28	1	2
ENSCSEP00000005832	Surp	PF01805.20	5.2e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005907	-	3223	-	ENSCSEP00000005843	921 (aa)	-	-
ENSCSET00000005895	-	3125	XM_008324809	ENSCSEP00000005832	954 (aa)	XP_008323031	UPI000495AAC1

Gene Model

Click here to download ENSCSEG00000003773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003773's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003773	sfswap	68	60.375	ENSG00000061936	SFSWAP	67	81.481	Homo_sapiens
ENSCSEG00000003773	sfswap	81	95.652	ENSAPOG00000005784	sfswap	76	95.652	Acanthochromis_polyacanthus
ENSCSEG00000003773	sfswap	67	58.806	ENSAMEG00000013818	SFSWAP	70	61.550	Ailuropoda_melanoleuca
ENSCSEG00000003773	sfswap	97	73.870	ENSAOCG00000016469	sfswap	77	76.383	Amphiprion_ocellaris
ENSCSEG00000003773	sfswap	77	76.788	ENSAPEG00000004965	sfswap	77	76.653	Amphiprion_percula
ENSCSEG00000003773	sfswap	76	79.098	ENSATEG00000021053	sfswap	76	78.969	Anabas_testudineus
ENSCSEG00000003773	sfswap	97	48.783	ENSACAG00000007220	SFSWAP	72	56.777	Anolis_carolinensis
ENSCSEG00000003773	sfswap	67	61.151	ENSANAG00000001518	SFSWAP	76	61.328	Aotus_nancymaae
ENSCSEG00000003773	sfswap	98	71.987	ENSACLG00000020159	sfswap	80	76.223	Astatotilapia_calliptera
ENSCSEG00000003773	sfswap	74	61.772	ENSAMXG00000008657	sfswap	78	61.332	Astyanax_mexicanus
ENSCSEG00000003773	sfswap	84	60.345	ENSBTAG00000000439	SFSWAP	77	60.976	Bos_taurus
ENSCSEG00000003773	sfswap	97	53.194	ENSCJAG00000003613	SFSWAP	73	61.472	Callithrix_jacchus
ENSCSEG00000003773	sfswap	67	60.411	ENSCAFG00000006625	SFSWAP	77	61.877	Canis_familiaris
ENSCSEG00000003773	sfswap	60	54.219	ENSCAFG00020011254	SFSWAP	66	55.315	Canis_lupus_dingo
ENSCSEG00000003773	sfswap	68	60.489	ENSCHIG00000008838	SFSWAP	77	61.007	Capra_hircus
ENSCSEG00000003773	sfswap	66	59.174	ENSCATG00000031094	SFSWAP	76	60.813	Cercocebus_atys
ENSCSEG00000003773	sfswap	99	51.559	ENSCLAG00000008380	SFSWAP	70	60.519	Chinchilla_lanigera
ENSCSEG00000003773	sfswap	66	58.869	ENSCSAG00000001884	SFSWAP	70	60.522	Chlorocebus_sabaeus
ENSCSEG00000003773	sfswap	79	59.843	ENSCHOG00000003578	SFSWAP	69	80.851	Choloepus_hoffmanni
ENSCSEG00000003773	sfswap	68	61.272	ENSCPBG00000024757	SFSWAP	75	60.317	Chrysemys_picta_bellii
ENSCSEG00000003773	sfswap	98	52.280	ENSCANG00000036501	SFSWAP	76	60.958	Colobus_angolensis_palliatus
ENSCSEG00000003773	sfswap	74	54.636	ENSCVAG00000001205	-	67	65.011	Cyprinodon_variegatus
ENSCSEG00000003773	sfswap	70	67.092	ENSDARG00000005980	sfswap	72	67.954	Danio_rerio
ENSCSEG00000003773	sfswap	68	60.086	ENSDNOG00000018742	SFSWAP	67	61.905	Dasypus_novemcinctus
ENSCSEG00000003773	sfswap	84	54.453	ENSDORG00000010352	Sfswap	70	55.539	Dipodomys_ordii
ENSCSEG00000003773	sfswap	54	97.727	ENSETEG00000016657	-	60	95.556	Echinops_telfairi
ENSCSEG00000003773	sfswap	88	35.144	ENSEBUG00000016748	SFSWAP	73	39.259	Eptatretus_burgeri
ENSCSEG00000003773	sfswap	97	51.908	ENSEASG00005016502	SFSWAP	72	60.704	Equus_asinus_asinus
ENSCSEG00000003773	sfswap	95	51.332	ENSECAG00000007657	SFSWAP	72	60.704	Equus_caballus
ENSCSEG00000003773	sfswap	91	44.072	ENSEEUG00000001713	SFSWAP	70	50.000	Erinaceus_europaeus
ENSCSEG00000003773	sfswap	72	64.486	ENSELUG00000010942	sfswap	93	62.647	Esox_lucius
ENSCSEG00000003773	sfswap	97	51.509	ENSFCAG00000010778	SFSWAP	70	61.449	Felis_catus
ENSCSEG00000003773	sfswap	68	61.549	ENSFALG00000009577	SFSWAP	70	60.832	Ficedula_albicollis
ENSCSEG00000003773	sfswap	77	73.720	ENSGAFG00000006272	sfswap	80	73.585	Gambusia_affinis
ENSCSEG00000003773	sfswap	73	82.353	ENSGACG00000017647	sfswap	91	66.763	Gasterosteus_aculeatus
ENSCSEG00000003773	sfswap	68	61.127	ENSGAGG00000002611	SFSWAP	75	60.492	Gopherus_agassizii
ENSCSEG00000003773	sfswap	68	60.375	ENSGGOG00000014877	SFSWAP	76	60.813	Gorilla_gorilla
ENSCSEG00000003773	sfswap	76	76.575	ENSHBUG00000005629	sfswap	79	75.951	Haplochromis_burtoni
ENSCSEG00000003773	sfswap	78	72.473	ENSHCOG00000009475	sfswap	78	73.450	Hippocampus_comes
ENSCSEG00000003773	sfswap	99	55.282	ENSIPUG00000010598	sfswap	99	56.085	Ictalurus_punctatus
ENSCSEG00000003773	sfswap	70	57.402	ENSJJAG00000006609	Sfswap	70	60.689	Jaculus_jaculus
ENSCSEG00000003773	sfswap	76	73.848	ENSKMAG00000013168	sfswap	76	74.497	Kryptolebias_marmoratus
ENSCSEG00000003773	sfswap	74	77.762	ENSLBEG00000010239	sfswap	78	77.762	Labrus_bergylta
ENSCSEG00000003773	sfswap	68	57.849	ENSLACG00000018678	SFSWAP	69	59.357	Latimeria_chalumnae
ENSCSEG00000003773	sfswap	52	47.189	ENSLAFG00000014462	SFSWAP	78	58.065	Loxodonta_africana
ENSCSEG00000003773	sfswap	68	60.320	ENSMFAG00000037352	SFSWAP	76	60.668	Macaca_fascicularis
ENSCSEG00000003773	sfswap	68	60.465	ENSMMUG00000020343	SFSWAP	70	60.813	Macaca_mulatta
ENSCSEG00000003773	sfswap	68	60.465	ENSMNEG00000041002	SFSWAP	76	60.813	Macaca_nemestrina
ENSCSEG00000003773	sfswap	68	59.124	ENSMLEG00000035728	SFSWAP	75	59.038	Mandrillus_leucophaeus
ENSCSEG00000003773	sfswap	76	80.491	ENSMAMG00000006631	sfswap	79	79.759	Mastacembelus_armatus
ENSCSEG00000003773	sfswap	76	76.849	ENSMZEG00005017834	SFSWAP	76	76.223	Maylandia_zebra
ENSCSEG00000003773	sfswap	98	49.335	ENSMGAG00000002191	SFSWAP	78	60.863	Meleagris_gallopavo
ENSCSEG00000003773	sfswap	72	62.310	ENSMODG00000015581	SFSWAP	67	55.093	Monodelphis_domestica
ENSCSEG00000003773	sfswap	99	50.000	ENSMUSG00000029439	Sfswap	84	66.990	Mus_musculus
ENSCSEG00000003773	sfswap	97	49.631	MGP_PahariEiJ_G0024360	Sfswap	84	66.019	Mus_pahari
ENSCSEG00000003773	sfswap	97	51.018	ENSMPUG00000002218	SFSWAP	70	61.662	Mustela_putorius_furo
ENSCSEG00000003773	sfswap	68	59.307	ENSMLUG00000011296	SFSWAP	74	60.832	Myotis_lucifugus
ENSCSEG00000003773	sfswap	70	59.187	ENSNGAG00000018167	Sfswap	72	59.327	Nannospalax_galili
ENSCSEG00000003773	sfswap	72	75.375	ENSNBRG00000020857	sfswap	74	74.702	Neolamprologus_brichardi
ENSCSEG00000003773	sfswap	98	51.408	ENSNLEG00000008386	SFSWAP	71	60.990	Nomascus_leucogenys
ENSCSEG00000003773	sfswap	70	64.439	ENSOPRG00000006983	-	70	61.647	Ochotona_princeps
ENSCSEG00000003773	sfswap	87	68.286	ENSONIG00000003757	sfswap	90	69.231	Oreochromis_niloticus
ENSCSEG00000003773	sfswap	76	74.390	ENSORLG00000010983	sfswap	78	74.168	Oryzias_latipes
ENSCSEG00000003773	sfswap	76	74.390	ENSORLG00020010779	sfswap	78	74.035	Oryzias_latipes_hni
ENSCSEG00000003773	sfswap	76	74.966	ENSORLG00015023093	sfswap	78	74.601	Oryzias_latipes_hsok
ENSCSEG00000003773	sfswap	76	75.720	ENSOMEG00000022065	sfswap	78	75.439	Oryzias_melastigma
ENSCSEG00000003773	sfswap	68	60.489	ENSOARG00000014314	SFSWAP	76	61.007	Ovis_aries
ENSCSEG00000003773	sfswap	68	60.465	ENSPPAG00000036706	SFSWAP	76	60.813	Pan_paniscus
ENSCSEG00000003773	sfswap	67	60.262	ENSPPRG00000017318	SFSWAP	78	60.699	Panthera_pardus
ENSCSEG00000003773	sfswap	68	57.308	ENSPTIG00000004304	SFSWAP	71	56.710	Panthera_tigris_altaica
ENSCSEG00000003773	sfswap	86	60.375	ENSPTRG00000005640	SFSWAP	76	60.813	Pan_troglodytes
ENSCSEG00000003773	sfswap	66	59.174	ENSPANG00000019737	SFSWAP	76	60.813	Papio_anubis
ENSCSEG00000003773	sfswap	74	62.275	ENSPKIG00000008327	sfswap	76	63.310	Paramormyrops_kingsleyae
ENSCSEG00000003773	sfswap	56	68.769	ENSPCIG00000006062	SFSWAP	75	58.551	Phascolarctos_cinereus
ENSCSEG00000003773	sfswap	77	74.491	ENSPFOG00000019657	sfswap	78	74.764	Poecilia_formosa
ENSCSEG00000003773	sfswap	77	74.491	ENSPLAG00000008513	sfswap	78	74.764	Poecilia_latipinna
ENSCSEG00000003773	sfswap	76	74.558	ENSPMEG00000008716	sfswap	78	74.629	Poecilia_mexicana
ENSCSEG00000003773	sfswap	77	73.677	ENSPREG00000006692	sfswap	78	73.954	Poecilia_reticulata
ENSCSEG00000003773	sfswap	51	59.281	ENSPCAG00000004977	-	57	62.124	Procavia_capensis
ENSCSEG00000003773	sfswap	55	65.963	ENSPCOG00000023786	SFSWAP	76	60.462	Propithecus_coquereli
ENSCSEG00000003773	sfswap	56	93.478	ENSPVAG00000014918	SFSWAP	61	93.478	Pteropus_vampyrus
ENSCSEG00000003773	sfswap	76	76.744	ENSPNYG00000012660	sfswap	74	76.662	Pundamilia_nyererei
ENSCSEG00000003773	sfswap	74	63.490	ENSPNAG00000007073	sfswap	79	63.205	Pygocentrus_nattereri
ENSCSEG00000003773	sfswap	98	51.118	ENSRROG00000032001	SFSWAP	76	60.668	Rhinopithecus_roxellana
ENSCSEG00000003773	sfswap	97	51.320	ENSSBOG00000026217	SFSWAP	70	61.183	Saimiri_boliviensis_boliviensis
ENSCSEG00000003773	sfswap	66	56.495	ENSSHAG00000014232	SFSWAP	72	59.879	Sarcophilus_harrisii
ENSCSEG00000003773	sfswap	67	66.817	ENSSFOG00015000766	sfswap	70	67.117	Scleropages_formosus
ENSCSEG00000003773	sfswap	76	79.783	ENSSMAG00000018718	sfswap	77	79.759	Scophthalmus_maximus
ENSCSEG00000003773	sfswap	76	80.601	ENSSDUG00000021680	sfswap	75	80.326	Seriola_dumerili
ENSCSEG00000003773	sfswap	76	80.464	ENSSLDG00000010835	sfswap	74	80.190	Seriola_lalandi_dorsalis
ENSCSEG00000003773	sfswap	77	58.434	ENSSARG00000000424	SFSWAP	83	60.241	Sorex_araneus
ENSCSEG00000003773	sfswap	60	54.167	ENSSPUG00000010272	SFSWAP	69	56.114	Sphenodon_punctatus
ENSCSEG00000003773	sfswap	76	77.155	ENSSPAG00000014310	sfswap	74	76.851	Stegastes_partitus
ENSCSEG00000003773	sfswap	80	56.490	ENSSSCG00000009744	SFSWAP	70	61.351	Sus_scrofa
ENSCSEG00000003773	sfswap	66	58.779	ENSTGUG00000004623	SFSWAP	72	60.951	Taeniopygia_guttata
ENSCSEG00000003773	sfswap	73	64.948	ENSTTRG00000013478	SFSWAP	70	55.827	Tursiops_truncatus
ENSCSEG00000003773	sfswap	84	59.012	ENSUAMG00000016807	SFSWAP	77	61.696	Ursus_americanus
ENSCSEG00000003773	sfswap	68	56.541	ENSUMAG00000002957	SFSWAP	71	58.832	Ursus_maritimus
ENSCSEG00000003773	sfswap	67	60.411	ENSVVUG00000010753	SFSWAP	70	61.168	Vulpes_vulpes
ENSCSEG00000003773	sfswap	85	55.977	ENSXETG00000009350	sfswap	88	59.452	Xenopus_tropicalis
ENSCSEG00000003773	sfswap	76	74.796	ENSXMAG00000009020	sfswap	78	75.000	Xiphophorus_maculatus