EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000003801 (Gene tree)
Gene ID: 103381207
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 8462 bases
Position: chr7:11694825-11703286
Accession: 103381207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000005891	RRM_1	PF00076.22	2.4e-31	1	2
ENSCSEP00000005891	RRM_1	PF00076.22	2.4e-31	2	2
ENSCSEP00000005886	RRM_1	PF00076.22	3.1e-31	1	2
ENSCSEP00000005886	RRM_1	PF00076.22	3.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005950	-	5881	-	ENSCSEP00000005886	314 (aa)	-	-
ENSCSET00000005955	-	2394	XM_008313454	ENSCSEP00000005891	290 (aa)	XP_008311676	UPI0004956658

Gene Model

Click here to download ENSCSEG00000003801's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG
csem05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000003801	srsf5b	64	70.312	ENSCSEG00000008109	srsf5a	68	57.708
ENSCSEG00000003801	srsf5b	59	46.591	ENSCSEG00000014272	-	65	48.571
ENSCSEG00000003801	srsf5b	61	41.209	ENSCSEG00000015663	srsf9	75	39.153
ENSCSEG00000003801	srsf5b	63	63.351	ENSCSEG00000010058	srsf4	74	63.566
ENSCSEG00000003801	srsf5b	59	43.386	ENSCSEG00000009973	-	87	41.365

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003801	srsf5b	64	82.353	ENSG00000100650	SRSF5	98	75.385	Homo_sapiens
ENSCSEG00000003801	srsf5b	90	93.487	ENSAPOG00000008642	srsf5b	85	94.758	Acanthochromis_polyacanthus
ENSCSEG00000003801	srsf5b	64	82.353	ENSAMEG00000014574	SRSF5	88	75.904	Ailuropoda_melanoleuca
ENSCSEG00000003801	srsf5b	100	91.864	ENSACIG00000010742	srsf5b	89	90.984	Amphilophus_citrinellus
ENSCSEG00000003801	srsf5b	90	93.487	ENSAOCG00000005719	srsf5b	85	94.758	Amphiprion_ocellaris
ENSCSEG00000003801	srsf5b	90	93.487	ENSAPEG00000007830	srsf5b	85	94.758	Amphiprion_percula
ENSCSEG00000003801	srsf5b	90	93.511	ENSATEG00000019112	srsf5b	85	94.378	Anabas_testudineus
ENSCSEG00000003801	srsf5b	62	83.333	ENSAPLG00000014681	SRSF5	89	72.835	Anas_platyrhynchos
ENSCSEG00000003801	srsf5b	64	83.957	ENSACAG00000005143	SRSF5	89	74.803	Anolis_carolinensis
ENSCSEG00000003801	srsf5b	64	82.353	ENSANAG00000027977	-	76	92.000	Aotus_nancymaae
ENSCSEG00000003801	srsf5b	100	91.525	ENSACLG00000026424	srsf5b	84	93.522	Astatotilapia_calliptera
ENSCSEG00000003801	srsf5b	66	92.147	ENSAMXG00000011932	srsf5b	84	92.308	Astyanax_mexicanus
ENSCSEG00000003801	srsf5b	64	82.353	ENSBTAG00000011596	SRSF5	88	75.904	Bos_taurus
ENSCSEG00000003801	srsf5b	64	82.353	ENSCJAG00000014884	SRSF5	76	92.000	Callithrix_jacchus
ENSCSEG00000003801	srsf5b	64	82.353	ENSCAFG00000016589	SRSF5	88	75.904	Canis_familiaris
ENSCSEG00000003801	srsf5b	64	82.353	ENSCAFG00020005661	SRSF5	88	75.904	Canis_lupus_dingo
ENSCSEG00000003801	srsf5b	64	82.353	ENSCHIG00000016794	SRSF5	87	75.904	Capra_hircus
ENSCSEG00000003801	srsf5b	64	82.353	ENSTSYG00000007786	SRSF5	76	92.000	Carlito_syrichta
ENSCSEG00000003801	srsf5b	64	82.353	ENSCAPG00000008801	SRSF5	87	76.400	Cavia_aperea
ENSCSEG00000003801	srsf5b	64	82.353	ENSCPOG00000039926	SRSF5	84	76.113	Cavia_porcellus
ENSCSEG00000003801	srsf5b	64	82.353	ENSCCAG00000029002	SRSF5	76	92.000	Cebus_capucinus
ENSCSEG00000003801	srsf5b	64	82.353	ENSCATG00000045051	SRSF5	76	92.000	Cercocebus_atys
ENSCSEG00000003801	srsf5b	64	82.353	ENSCLAG00000004755	SRSF5	88	74.016	Chinchilla_lanigera
ENSCSEG00000003801	srsf5b	64	82.353	ENSCSAG00000013041	SRSF5	89	76.000	Chlorocebus_sabaeus
ENSCSEG00000003801	srsf5b	64	82.888	ENSCPBG00000021653	SRSF5	89	74.803	Chrysemys_picta_bellii
ENSCSEG00000003801	srsf5b	64	82.353	ENSCANG00000030560	SRSF5	76	92.000	Colobus_angolensis_palliatus
ENSCSEG00000003801	srsf5b	64	82.353	ENSCGRG00001015339	Srsf5	88	69.880	Cricetulus_griseus_chok1gshd
ENSCSEG00000003801	srsf5b	64	82.353	ENSCGRG00000009833	Srsf5	89	76.000	Cricetulus_griseus_crigri
ENSCSEG00000003801	srsf5b	93	77.320	ENSCVAG00000017240	srsf5b	82	85.448	Cyprinodon_variegatus
ENSCSEG00000003801	srsf5b	64	91.444	ENSDARG00000027734	srsf5b	90	89.231	Danio_rerio
ENSCSEG00000003801	srsf5b	64	82.353	ENSDNOG00000006160	SRSF5	89	75.904	Dasypus_novemcinctus
ENSCSEG00000003801	srsf5b	64	82.353	ENSDORG00000003989	Srsf5	88	68.675	Dipodomys_ordii
ENSCSEG00000003801	srsf5b	64	79.032	ENSETEG00000020396	SRSF5	89	73.790	Echinops_telfairi
ENSCSEG00000003801	srsf5b	66	61.735	ENSEBUG00000006229	srsf5b	76	55.251	Eptatretus_burgeri
ENSCSEG00000003801	srsf5b	64	82.353	ENSEASG00005016615	SRSF5	88	75.904	Equus_asinus_asinus
ENSCSEG00000003801	srsf5b	64	81.915	ENSECAG00000026873	SRSF5	90	74.242	Equus_caballus
ENSCSEG00000003801	srsf5b	66	94.330	ENSELUG00000019852	srsf5b	85	82.639	Esox_lucius
ENSCSEG00000003801	srsf5b	64	82.353	ENSFCAG00000008848	SRSF5	75	92.000	Felis_catus
ENSCSEG00000003801	srsf5b	64	83.333	ENSFALG00000004979	SRSF5	85	76.132	Ficedula_albicollis
ENSCSEG00000003801	srsf5b	64	82.353	ENSFDAG00000011562	SRSF5	89	75.904	Fukomys_damarensis
ENSCSEG00000003801	srsf5b	93	87.273	ENSFHEG00000009476	srsf5b	81	90.873	Fundulus_heteroclitus
ENSCSEG00000003801	srsf5b	66	78.761	ENSGMOG00000000595	srsf5b	100	78.166	Gadus_morhua
ENSCSEG00000003801	srsf5b	64	82.796	ENSGALG00000009421	SRSF5	90	75.000	Gallus_gallus
ENSCSEG00000003801	srsf5b	91	90.637	ENSGAFG00000002865	srsf5b	81	92.713	Gambusia_affinis
ENSCSEG00000003801	srsf5b	65	68.699	ENSGACG00000007834	srsf5b	86	88.235	Gasterosteus_aculeatus
ENSCSEG00000003801	srsf5b	64	82.888	ENSGAGG00000004447	SRSF5	89	74.803	Gopherus_agassizii
ENSCSEG00000003801	srsf5b	64	82.353	ENSGGOG00000016462	SRSF5	76	92.000	Gorilla_gorilla
ENSCSEG00000003801	srsf5b	100	91.186	ENSHBUG00000012462	srsf5b	93	97.692	Haplochromis_burtoni
ENSCSEG00000003801	srsf5b	64	81.818	ENSHGLG00000010147	SRSF5	89	75.502	Heterocephalus_glaber_female
ENSCSEG00000003801	srsf5b	78	51.261	ENSHGLG00100000095	-	62	59.890	Heterocephalus_glaber_male
ENSCSEG00000003801	srsf5b	64	81.818	ENSHGLG00100015328	SRSF5	89	75.502	Heterocephalus_glaber_male
ENSCSEG00000003801	srsf5b	66	87.500	ENSHCOG00000005592	srsf5b	80	76.078	Hippocampus_comes
ENSCSEG00000003801	srsf5b	64	82.353	ENSSTOG00000020672	SRSF5	89	75.904	Ictidomys_tridecemlineatus
ENSCSEG00000003801	srsf5b	64	82.353	ENSJJAG00000001688	Srsf5	88	75.904	Jaculus_jaculus
ENSCSEG00000003801	srsf5b	91	89.139	ENSKMAG00000020486	srsf5b	84	95.385	Kryptolebias_marmoratus
ENSCSEG00000003801	srsf5b	100	91.186	ENSLBEG00000013647	srsf5b	85	93.600	Labrus_bergylta
ENSCSEG00000003801	srsf5b	64	83.333	ENSLACG00000005874	SRSF5	96	71.795	Latimeria_chalumnae
ENSCSEG00000003801	srsf5b	64	84.293	ENSLOCG00000012438	srsf5b	87	72.541	Lepisosteus_oculatus
ENSCSEG00000003801	srsf5b	64	81.818	ENSLAFG00000005260	SRSF5	88	75.502	Loxodonta_africana
ENSCSEG00000003801	srsf5b	64	82.353	ENSMFAG00000002393	SRSF5	76	92.000	Macaca_fascicularis
ENSCSEG00000003801	srsf5b	64	82.353	ENSMNEG00000030872	SRSF5	76	92.000	Macaca_nemestrina
ENSCSEG00000003801	srsf5b	64	82.353	ENSMLEG00000030017	SRSF5	76	92.000	Mandrillus_leucophaeus
ENSCSEG00000003801	srsf5b	87	93.281	ENSMAMG00000002673	srsf5b	85	93.200	Mastacembelus_armatus
ENSCSEG00000003801	srsf5b	100	91.525	ENSMZEG00005003550	srsf5b	84	93.522	Maylandia_zebra
ENSCSEG00000003801	srsf5b	51	78.912	ENSMGAG00000011835	SRSF5	87	64.319	Meleagris_gallopavo
ENSCSEG00000003801	srsf5b	64	82.353	ENSMAUG00000009544	Srsf5	89	76.000	Mesocricetus_auratus
ENSCSEG00000003801	srsf5b	64	82.353	ENSMICG00000037432	-	76	92.000	Microcebus_murinus
ENSCSEG00000003801	srsf5b	64	82.353	ENSMOCG00000013134	Srsf5	89	76.000	Microtus_ochrogaster
ENSCSEG00000003801	srsf5b	64	94.652	ENSMMOG00000000137	srsf5b	93	79.545	Mola_mola
ENSCSEG00000003801	srsf5b	64	82.888	ENSMODG00000011362	SRSF5	89	74.409	Monodelphis_domestica
ENSCSEG00000003801	srsf5b	100	87.086	ENSMALG00000021875	srsf5b	84	98.462	Monopterus_albus
ENSCSEG00000003801	srsf5b	64	82.353	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSCSEG00000003801	srsf5b	64	82.353	MGP_PahariEiJ_G0029659	Srsf5	89	76.000	Mus_pahari
ENSCSEG00000003801	srsf5b	64	82.353	ENSMPUG00000007458	SRSF5	88	75.904	Mustela_putorius_furo
ENSCSEG00000003801	srsf5b	64	82.353	ENSMLUG00000011939	SRSF5	87	67.589	Myotis_lucifugus
ENSCSEG00000003801	srsf5b	64	82.353	ENSNGAG00000010073	-	89	75.502	Nannospalax_galili
ENSCSEG00000003801	srsf5b	100	88.814	ENSNBRG00000001285	srsf5b	84	93.522	Neolamprologus_brichardi
ENSCSEG00000003801	srsf5b	64	82.353	ENSNLEG00000001615	SRSF5	76	92.000	Nomascus_leucogenys
ENSCSEG00000003801	srsf5b	64	82.353	ENSOPRG00000008286	SRSF5	88	68.504	Ochotona_princeps
ENSCSEG00000003801	srsf5b	64	80.749	ENSODEG00000000700	-	92	73.413	Octodon_degus
ENSCSEG00000003801	srsf5b	64	82.353	ENSODEG00000013469	-	88	74.016	Octodon_degus
ENSCSEG00000003801	srsf5b	100	91.525	ENSONIG00000005759	srsf5b	84	93.522	Oreochromis_niloticus
ENSCSEG00000003801	srsf5b	64	78.610	ENSOANG00000013336	SRSF5	89	72.691	Ornithorhynchus_anatinus
ENSCSEG00000003801	srsf5b	67	80.928	ENSOCUG00000009274	SRSF5	74	68.145	Oryctolagus_cuniculus
ENSCSEG00000003801	srsf5b	100	77.259	ENSORLG00000029854	srsf5b	86	76.449	Oryzias_latipes
ENSCSEG00000003801	srsf5b	91	87.640	ENSORLG00015001720	srsf5b	85	90.400	Oryzias_latipes_hsok
ENSCSEG00000003801	srsf5b	93	87.085	ENSOMEG00000020690	srsf5b	62	90.323	Oryzias_melastigma
ENSCSEG00000003801	srsf5b	64	82.353	ENSOGAG00000015122	SRSF5	89	75.904	Otolemur_garnettii
ENSCSEG00000003801	srsf5b	64	82.353	ENSPPAG00000029921	SRSF5	76	92.000	Pan_paniscus
ENSCSEG00000003801	srsf5b	64	82.353	ENSPPRG00000012903	SRSF5	75	92.000	Panthera_pardus
ENSCSEG00000003801	srsf5b	64	82.353	ENSPTIG00000018589	SRSF5	75	92.000	Panthera_tigris_altaica
ENSCSEG00000003801	srsf5b	64	82.353	ENSPTRG00000006488	SRSF5	76	92.000	Pan_troglodytes
ENSCSEG00000003801	srsf5b	64	82.353	ENSPANG00000021091	SRSF5	76	92.000	Papio_anubis
ENSCSEG00000003801	srsf5b	64	82.888	ENSPSIG00000012522	SRSF5	89	74.803	Pelodiscus_sinensis
ENSCSEG00000003801	srsf5b	64	82.353	ENSPEMG00000020173	Srsf5	88	69.880	Peromyscus_maniculatus_bairdii
ENSCSEG00000003801	srsf5b	66	60.606	ENSPMAG00000007790	srsf5b	79	53.600	Petromyzon_marinus
ENSCSEG00000003801	srsf5b	64	82.888	ENSPCIG00000011877	SRSF5	89	74.409	Phascolarctos_cinereus
ENSCSEG00000003801	srsf5b	91	89.888	ENSPFOG00000017700	srsf5b	81	91.903	Poecilia_formosa
ENSCSEG00000003801	srsf5b	91	90.262	ENSPLAG00000006480	srsf5b	81	92.308	Poecilia_latipinna
ENSCSEG00000003801	srsf5b	91	89.888	ENSPMEG00000012751	srsf5b	84	97.692	Poecilia_mexicana
ENSCSEG00000003801	srsf5b	91	89.888	ENSPREG00000010381	srsf5b	81	91.903	Poecilia_reticulata
ENSCSEG00000003801	srsf5b	64	82.353	ENSPPYG00000005945	SRSF5	89	76.000	Pongo_abelii
ENSCSEG00000003801	srsf5b	53	79.355	ENSPCAG00000004405	SRSF5	100	78.571	Procavia_capensis
ENSCSEG00000003801	srsf5b	64	82.353	ENSPCOG00000014442	SRSF5	89	75.904	Propithecus_coquereli
ENSCSEG00000003801	srsf5b	100	83.729	ENSPNYG00000002669	srsf5b	94	97.692	Pundamilia_nyererei
ENSCSEG00000003801	srsf5b	66	91.623	ENSPNAG00000011262	srsf5b	84	89.231	Pygocentrus_nattereri
ENSCSEG00000003801	srsf5b	64	82.353	ENSRNOG00000005513	Srsf5	88	69.880	Rattus_norvegicus
ENSCSEG00000003801	srsf5b	64	82.353	ENSRBIG00000013003	SRSF5	76	92.000	Rhinopithecus_bieti
ENSCSEG00000003801	srsf5b	64	82.353	ENSRROG00000043407	SRSF5	76	92.000	Rhinopithecus_roxellana
ENSCSEG00000003801	srsf5b	64	82.353	ENSSBOG00000030784	SRSF5	76	92.000	Saimiri_boliviensis_boliviensis
ENSCSEG00000003801	srsf5b	64	82.888	ENSSHAG00000002871	SRSF5	89	74.409	Sarcophilus_harrisii
ENSCSEG00000003801	srsf5b	91	82.313	ENSSMAG00000019728	srsf5b	80	88.760	Scophthalmus_maximus
ENSCSEG00000003801	srsf5b	90	90.875	ENSSDUG00000005766	srsf5b	87	94.400	Seriola_dumerili
ENSCSEG00000003801	srsf5b	90	93.156	ENSSLDG00000023255	srsf5b	84	97.692	Seriola_lalandi_dorsalis
ENSCSEG00000003801	srsf5b	67	70.466	ENSSARG00000001059	SRSF5	75	58.871	Sorex_araneus
ENSCSEG00000003801	srsf5b	64	84.293	ENSSPUG00000002464	SRSF5	90	71.631	Sphenodon_punctatus
ENSCSEG00000003801	srsf5b	90	93.103	ENSSPAG00000015325	srsf5b	85	94.355	Stegastes_partitus
ENSCSEG00000003801	srsf5b	64	82.353	ENSSSCG00000032583	SRSF5	88	75.502	Sus_scrofa
ENSCSEG00000003801	srsf5b	64	83.333	ENSTGUG00000011425	SRSF5	89	74.308	Taeniopygia_guttata
ENSCSEG00000003801	srsf5b	66	92.632	ENSTRUG00000017811	srsf5b	81	84.646	Takifugu_rubripes
ENSCSEG00000003801	srsf5b	98	78.445	ENSTNIG00000016411	srsf5b	82	82.041	Tetraodon_nigroviridis
ENSCSEG00000003801	srsf5b	64	80.214	ENSTBEG00000001972	SRSF5	89	73.622	Tupaia_belangeri
ENSCSEG00000003801	srsf5b	64	82.258	ENSTTRG00000003318	SRSF5	87	75.806	Tursiops_truncatus
ENSCSEG00000003801	srsf5b	64	82.353	ENSUAMG00000014184	SRSF5	88	75.904	Ursus_americanus
ENSCSEG00000003801	srsf5b	64	90.625	ENSUMAG00000009827	SRSF5	88	68.675	Ursus_maritimus
ENSCSEG00000003801	srsf5b	64	82.353	ENSVPAG00000006448	SRSF5	89	75.904	Vicugna_pacos
ENSCSEG00000003801	srsf5b	64	82.353	ENSVVUG00000003790	SRSF5	88	75.904	Vulpes_vulpes
ENSCSEG00000003801	srsf5b	65	82.540	ENSXETG00000002211	srsf5	90	75.697	Xenopus_tropicalis
ENSCSEG00000003801	srsf5b	91	81.273	ENSXCOG00000001570	srsf5b	81	89.069	Xiphophorus_couchianus
ENSCSEG00000003801	srsf5b	91	90.262	ENSXMAG00000026416	srsf5b	84	97.692	Xiphophorus_maculatus