EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000003828 (Gene tree)
Gene ID: 103390674
Gene Symbol: neil3
Alias: zgc:103553
Full Name: nei like DNA glycosylase 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 13129 bases
Position: chr15:5103831-5116959
Accession: 103390674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000005926	zf-RanBP	PF00641.18	4.8e-07	1	1
ENSCSEP00000005921	zf-RanBP	PF00641.18	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000005990	-	2117	XM_008326609	ENSCSEP00000005926	585 (aa)	XP_008324831	-
ENSCSET00000005985	-	2102	-	ENSCSEP00000005921	639 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000003828's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003828	neil3	99	52.335	ENSG00000109674	NEIL3	100	52.335	Homo_sapiens
ENSCSEG00000003828	neil3	99	77.397	ENSACIG00000002265	neil3	100	77.397	Amphilophus_citrinellus
ENSCSEG00000003828	neil3	99	77.683	ENSATEG00000004193	neil3	100	77.683	Anabas_testudineus
ENSCSEG00000003828	neil3	99	46.055	ENSANAG00000026464	NEIL3	100	46.055	Aotus_nancymaae
ENSCSEG00000003828	neil3	99	81.443	ENSACLG00000011270	neil3	100	81.443	Astatotilapia_calliptera
ENSCSEG00000003828	neil3	99	51.053	ENSBTAG00000005825	NEIL3	100	51.053	Bos_taurus
ENSCSEG00000003828	neil3	99	50.804	ENSCJAG00000005464	NEIL3	100	50.804	Callithrix_jacchus
ENSCSEG00000003828	neil3	99	51.053	ENSCHIG00000009157	NEIL3	100	51.053	Capra_hircus
ENSCSEG00000003828	neil3	99	51.650	ENSTSYG00000014680	NEIL3	100	51.650	Carlito_syrichta
ENSCSEG00000003828	neil3	87	51.341	ENSCAPG00000006333	NEIL3	98	51.341	Cavia_aperea
ENSCSEG00000003828	neil3	99	50.487	ENSCPOG00000003297	NEIL3	100	50.487	Cavia_porcellus
ENSCSEG00000003828	neil3	99	50.886	ENSCCAG00000018838	NEIL3	100	50.886	Cebus_capucinus
ENSCSEG00000003828	neil3	99	51.623	ENSCLAG00000015661	NEIL3	100	51.623	Chinchilla_lanigera
ENSCSEG00000003828	neil3	99	53.150	ENSCSAG00000003064	NEIL3	100	53.150	Chlorocebus_sabaeus
ENSCSEG00000003828	neil3	75	64.407	ENSCHOG00000008101	NEIL3	76	64.407	Choloepus_hoffmanni
ENSCSEG00000003828	neil3	99	52.666	ENSCANG00000043622	NEIL3	100	52.666	Colobus_angolensis_palliatus
ENSCSEG00000003828	neil3	99	60.788	ENSDARG00000020079	neil3	100	60.788	Danio_rerio
ENSCSEG00000003828	neil3	89	52.830	ENSDNOG00000012236	NEIL3	100	52.830	Dasypus_novemcinctus
ENSCSEG00000003828	neil3	99	52.512	ENSEASG00005022272	NEIL3	100	52.512	Equus_asinus_asinus
ENSCSEG00000003828	neil3	99	52.435	ENSECAG00000009121	NEIL3	100	52.435	Equus_caballus
ENSCSEG00000003828	neil3	77	44.635	ENSEEUG00000010848	NEIL3	100	44.635	Erinaceus_europaeus
ENSCSEG00000003828	neil3	99	51.307	ENSFCAG00000004956	NEIL3	100	51.307	Felis_catus
ENSCSEG00000003828	neil3	99	81.959	ENSHBUG00000023848	neil3	100	81.959	Haplochromis_burtoni
ENSCSEG00000003828	neil3	89	51.407	ENSHGLG00000006643	NEIL3	100	51.407	Heterocephalus_glaber_female
ENSCSEG00000003828	neil3	89	51.407	ENSHGLG00100006959	NEIL3	100	51.407	Heterocephalus_glaber_male
ENSCSEG00000003828	neil3	99	50.729	ENSSTOG00000016245	NEIL3	100	50.729	Ictidomys_tridecemlineatus
ENSCSEG00000003828	neil3	65	52.685	ENSLACG00000000308	NEIL3	99	52.685	Latimeria_chalumnae
ENSCSEG00000003828	neil3	99	52.836	ENSMFAG00000002547	NEIL3	100	52.836	Macaca_fascicularis
ENSCSEG00000003828	neil3	99	52.998	ENSMMUG00000007394	NEIL3	100	52.998	Macaca_mulatta
ENSCSEG00000003828	neil3	99	52.827	ENSMNEG00000036177	NEIL3	100	52.827	Macaca_nemestrina
ENSCSEG00000003828	neil3	99	81.615	ENSMAMG00000017052	neil3	100	81.615	Mastacembelus_armatus
ENSCSEG00000003828	neil3	99	81.443	ENSMZEG00005001680	neil3	100	81.443	Maylandia_zebra
ENSCSEG00000003828	neil3	89	47.880	ENSMODG00000003813	NEIL3	99	48.233	Monodelphis_domestica
ENSCSEG00000003828	neil3	99	50.962	MGP_CAROLIEiJ_G0031052	Neil3	100	50.962	Mus_caroli
ENSCSEG00000003828	neil3	99	50.734	ENSMUSG00000039396	Neil3	100	50.734	Mus_musculus
ENSCSEG00000003828	neil3	99	50.490	MGP_PahariEiJ_G0021518	Neil3	100	50.490	Mus_pahari
ENSCSEG00000003828	neil3	99	51.685	MGP_SPRETEiJ_G0032167	Neil3	100	51.685	Mus_spretus
ENSCSEG00000003828	neil3	99	75.430	ENSNBRG00000013229	neil3	100	75.430	Neolamprologus_brichardi
ENSCSEG00000003828	neil3	99	52.335	ENSNLEG00000016818	NEIL3	100	52.335	Nomascus_leucogenys
ENSCSEG00000003828	neil3	99	50.325	ENSODEG00000004102	NEIL3	100	50.649	Octodon_degus
ENSCSEG00000003828	neil3	99	82.646	ENSONIG00000001176	neil3	100	82.646	Oreochromis_niloticus
ENSCSEG00000003828	neil3	98	52.059	ENSOCUG00000001040	NEIL3	99	52.059	Oryctolagus_cuniculus
ENSCSEG00000003828	neil3	99	71.306	ENSOMEG00000014798	neil3	100	71.306	Oryzias_melastigma
ENSCSEG00000003828	neil3	99	50.245	ENSOGAG00000012624	NEIL3	100	50.245	Otolemur_garnettii
ENSCSEG00000003828	neil3	95	52.566	ENSOARG00000006852	NEIL3	99	52.566	Ovis_aries
ENSCSEG00000003828	neil3	99	52.335	ENSPPAG00000035318	NEIL3	100	52.335	Pan_paniscus
ENSCSEG00000003828	neil3	99	52.727	ENSPPRG00000003958	NEIL3	100	52.727	Panthera_pardus
ENSCSEG00000003828	neil3	99	52.893	ENSPTIG00000012966	NEIL3	100	52.893	Panthera_tigris_altaica
ENSCSEG00000003828	neil3	99	52.181	ENSPTRG00000016617	NEIL3	100	52.181	Pan_troglodytes
ENSCSEG00000003828	neil3	99	52.827	ENSPANG00000014727	NEIL3	100	52.827	Papio_anubis
ENSCSEG00000003828	neil3	99	77.663	ENSPFOG00000018858	neil3	100	77.663	Poecilia_formosa
ENSCSEG00000003828	neil3	99	77.148	ENSPLAG00000010685	neil3	100	77.148	Poecilia_latipinna
ENSCSEG00000003828	neil3	99	77.491	ENSPMEG00000013971	neil3	100	77.491	Poecilia_mexicana
ENSCSEG00000003828	neil3	99	74.742	ENSPREG00000009841	neil3	100	74.742	Poecilia_reticulata
ENSCSEG00000003828	neil3	71	62.712	ENSPCAG00000006386	NEIL3	80	62.712	Procavia_capensis
ENSCSEG00000003828	neil3	72	71.287	ENSPCOG00000010888	NEIL3	92	71.287	Propithecus_coquereli
ENSCSEG00000003828	neil3	99	52.059	ENSPVAG00000002255	NEIL3	99	52.059	Pteropus_vampyrus
ENSCSEG00000003828	neil3	99	79.897	ENSPNYG00000021276	neil3	100	79.897	Pundamilia_nyererei
ENSCSEG00000003828	neil3	97	54.217	ENSPNAG00000019983	neil3	100	54.783	Pygocentrus_nattereri
ENSCSEG00000003828	neil3	99	52.033	ENSRNOG00000011688	Neil3	100	52.033	Rattus_norvegicus
ENSCSEG00000003828	neil3	99	52.666	ENSRBIG00000023002	NEIL3	100	52.666	Rhinopithecus_bieti
ENSCSEG00000003828	neil3	99	52.666	ENSRROG00000000069	NEIL3	100	52.666	Rhinopithecus_roxellana
ENSCSEG00000003828	neil3	99	50.806	ENSSBOG00000032601	NEIL3	100	50.806	Saimiri_boliviensis_boliviensis
ENSCSEG00000003828	neil3	99	51.858	ENSSHAG00000007680	NEIL3	100	51.858	Sarcophilus_harrisii
ENSCSEG00000003828	neil3	99	82.646	ENSSMAG00000009621	neil3	100	82.646	Scophthalmus_maximus
ENSCSEG00000003828	neil3	99	52.435	ENSSSCG00000015771	NEIL3	100	52.435	Sus_scrofa
ENSCSEG00000003828	neil3	99	51.629	ENSTTRG00000013224	NEIL3	100	51.550	Tursiops_truncatus
ENSCSEG00000003828	neil3	99	47.078	ENSVPAG00000005020	NEIL3	100	47.078	Vicugna_pacos
ENSCSEG00000003828	neil3	91	70.433	ENSXCOG00000014831	neil3	96	70.433	Xiphophorus_couchianus
ENSCSEG00000003828	neil3	99	76.460	ENSXMAG00000028638	neil3	100	76.460	Xiphophorus_maculatus