EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000003915 (Gene tree)
Gene ID: 103384781
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 26192 bases
Position: chr10:7028737-7054928
Accession: 103384781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000006079	RRM_5	PF13893.6	8.1e-07	1	2
ENSCSEP00000006079	RRM_5	PF13893.6	8.1e-07	2	2
ENSCSEP00000006072	RRM_5	PF13893.6	9.1e-07	1	2
ENSCSEP00000006072	RRM_5	PF13893.6	9.1e-07	2	2
ENSCSEP00000006079	RRM_1	PF00076.22	9.2e-41	1	3
ENSCSEP00000006079	RRM_1	PF00076.22	9.2e-41	2	3
ENSCSEP00000006079	RRM_1	PF00076.22	9.2e-41	3	3
ENSCSEP00000006072	RRM_1	PF00076.22	1.1e-40	1	3
ENSCSEP00000006072	RRM_1	PF00076.22	1.1e-40	2	3
ENSCSEP00000006072	RRM_1	PF00076.22	1.1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000006144	-	12125	XM_017036051	ENSCSEP00000006079	3418 (aa)	-	-
ENSCSET00000006137	-	12488	XM_008318445	ENSCSEP00000006072	3539 (aa)	XP_008316667	UPI000497AD6F

Gene Model

Click here to download ENSCSEG00000003915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003915's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003915	-	91	47.902	ENSG00000065526	SPEN	85	91.667	Homo_sapiens
ENSCSEG00000003915	-	100	77.846	ENSAPOG00000009853	-	87	94.382	Acanthochromis_polyacanthus
ENSCSEG00000003915	-	89	78.378	ENSAPOG00000011411	si:ch1073-335m2.2	99	78.378	Acanthochromis_polyacanthus
ENSCSEG00000003915	-	99	45.596	ENSAMEG00000011817	SPEN	68	83.146	Ailuropoda_melanoleuca
ENSCSEG00000003915	-	84	69.962	ENSAOCG00000008077	si:ch1073-335m2.2	99	69.427	Amphiprion_ocellaris
ENSCSEG00000003915	-	100	78.104	ENSAOCG00000014505	-	100	77.669	Amphiprion_ocellaris
ENSCSEG00000003915	-	100	78.053	ENSAPEG00000010288	-	100	77.731	Amphiprion_percula
ENSCSEG00000003915	-	95	76.562	ENSAPEG00000013515	si:ch1073-335m2.2	100	76.562	Amphiprion_percula
ENSCSEG00000003915	-	100	78.693	ENSATEG00000005627	-	100	77.562	Anabas_testudineus
ENSCSEG00000003915	-	97	52.008	ENSAPLG00000012618	SPEN	99	81.457	Anas_platyrhynchos
ENSCSEG00000003915	-	99	43.609	ENSACAG00000013761	SPEN	100	43.112	Anolis_carolinensis
ENSCSEG00000003915	-	91	47.520	ENSANAG00000034428	SPEN	67	81.046	Aotus_nancymaae
ENSCSEG00000003915	-	100	76.713	ENSACLG00000016922	-	99	76.713	Astatotilapia_calliptera
ENSCSEG00000003915	-	88	75.385	ENSACLG00000021433	si:ch1073-335m2.2	99	75.385	Astatotilapia_calliptera
ENSCSEG00000003915	-	100	59.006	ENSAMXG00000012485	spen	99	59.011	Astyanax_mexicanus
ENSCSEG00000003915	-	99	46.354	ENSBTAG00000018729	SPEN	96	83.146	Bos_taurus
ENSCSEG00000003915	-	91	51.000	ENSCJAG00000008527	SPEN	83	84.270	Callithrix_jacchus
ENSCSEG00000003915	-	87	51.695	ENSCAFG00000016132	-	82	84.270	Canis_familiaris
ENSCSEG00000003915	-	100	46.442	ENSCHIG00000025070	SPEN	98	84.270	Capra_hircus
ENSCSEG00000003915	-	81	45.651	ENSTSYG00000036016	SPEN	86	46.129	Carlito_syrichta
ENSCSEG00000003915	-	97	50.175	ENSCAPG00000013803	SPEN	99	81.457	Cavia_aperea
ENSCSEG00000003915	-	94	50.377	ENSCPOG00000014036	SPEN	96	81.333	Cavia_porcellus
ENSCSEG00000003915	-	91	42.436	ENSCCAG00000020258	SPEN	67	84.270	Cebus_capucinus
ENSCSEG00000003915	-	84	87.407	ENSCATG00000015079	SPEN	68	84.270	Cercocebus_atys
ENSCSEG00000003915	-	84	70.464	ENSCLAG00000002018	SPEN	75	81.333	Chinchilla_lanigera
ENSCSEG00000003915	-	90	48.576	ENSCSAG00000000841	SPEN	68	84.270	Chlorocebus_sabaeus
ENSCSEG00000003915	-	100	47.065	ENSCPBG00000010477	SPEN	99	84.270	Chrysemys_picta_bellii
ENSCSEG00000003915	-	90	46.450	ENSCANG00000034547	SPEN	68	75.000	Colobus_angolensis_palliatus
ENSCSEG00000003915	-	89	48.005	ENSCGRG00001007725	Spen	85	83.708	Cricetulus_griseus_chok1gshd
ENSCSEG00000003915	-	88	46.560	ENSCGRG00000010581	Spen	84	80.667	Cricetulus_griseus_crigri
ENSCSEG00000003915	-	94	76.020	ENSCVAG00000009075	si:ch1073-335m2.2	78	78.488	Cyprinodon_variegatus
ENSCSEG00000003915	-	100	72.460	ENSCVAG00000016346	-	99	72.460	Cyprinodon_variegatus
ENSCSEG00000003915	-	98	73.558	ENSDARG00000074332	si:ch1073-335m2.2	100	73.558	Danio_rerio
ENSCSEG00000003915	-	100	52.653	ENSDARG00000074245	spen	100	91.111	Danio_rerio
ENSCSEG00000003915	-	99	45.587	ENSDNOG00000041948	SPEN	96	45.304	Dasypus_novemcinctus
ENSCSEG00000003915	-	89	45.742	ENSDORG00000023909	Spen	96	80.690	Dipodomys_ordii
ENSCSEG00000003915	-	57	60.900	ENSETEG00000016692	-	52	81.333	Echinops_telfairi
ENSCSEG00000003915	-	94	87.407	ENSEASG00005015911	SPEN	85	84.270	Equus_asinus_asinus
ENSCSEG00000003915	-	94	87.407	ENSECAG00000008833	SPEN	85	84.270	Equus_caballus
ENSCSEG00000003915	-	61	88.372	ENSEEUG00000010255	SPEN	59	88.372	Erinaceus_europaeus
ENSCSEG00000003915	-	97	83.060	ENSELUG00000007726	si:ch1073-335m2.2	99	83.060	Esox_lucius
ENSCSEG00000003915	-	91	47.426	ENSFDAG00000010212	SPEN	78	80.690	Fukomys_damarensis
ENSCSEG00000003915	-	99	64.800	ENSFHEG00000004544	si:ch1073-335m2.2	100	64.800	Fundulus_heteroclitus
ENSCSEG00000003915	-	58	80.226	ENSGMOG00000008156	si:ch1073-335m2.2	97	80.226	Gadus_morhua
ENSCSEG00000003915	-	97	89.617	ENSGMOG00000008397	-	98	90.503	Gadus_morhua
ENSCSEG00000003915	-	96	62.992	ENSGAFG00000021570	si:ch1073-335m2.2	99	79.651	Gambusia_affinis
ENSCSEG00000003915	-	100	73.220	ENSGAFG00000015819	-	88	94.382	Gambusia_affinis
ENSCSEG00000003915	-	100	71.247	ENSGACG00000005341	-	100	71.084	Gasterosteus_aculeatus
ENSCSEG00000003915	-	97	75.543	ENSGACG00000001176	si:ch1073-335m2.2	73	75.543	Gasterosteus_aculeatus
ENSCSEG00000003915	-	100	47.998	ENSGAGG00000020785	SPEN	99	84.270	Gopherus_agassizii
ENSCSEG00000003915	-	91	47.983	ENSGGOG00000012041	SPEN	68	84.270	Gorilla_gorilla
ENSCSEG00000003915	-	74	77.473	ENSHBUG00000023253	si:ch1073-335m2.2	85	75.897	Haplochromis_burtoni
ENSCSEG00000003915	-	100	76.662	ENSHBUG00000020626	-	99	76.662	Haplochromis_burtoni
ENSCSEG00000003915	-	83	55.779	ENSHGLG00000019259	SPEN	77	84.270	Heterocephalus_glaber_female
ENSCSEG00000003915	-	69	54.997	ENSHGLG00100019294	SPEN	75	80.690	Heterocephalus_glaber_male
ENSCSEG00000003915	-	95	63.536	ENSHCOG00000006004	si:ch1073-335m2.2	99	63.536	Hippocampus_comes
ENSCSEG00000003915	-	100	52.472	ENSIPUG00000021668	spen	100	52.315	Ictalurus_punctatus
ENSCSEG00000003915	-	95	68.161	ENSIPUG00000018212	si:ch1073-335m2.2	99	68.161	Ictalurus_punctatus
ENSCSEG00000003915	-	88	71.308	ENSSTOG00000021428	SPEN	83	77.273	Ictidomys_tridecemlineatus
ENSCSEG00000003915	-	75	67.460	ENSJJAG00000010882	Spen	97	84.831	Jaculus_jaculus
ENSCSEG00000003915	-	100	74.589	ENSKMAG00000003882	-	99	74.576	Kryptolebias_marmoratus
ENSCSEG00000003915	-	93	75.000	ENSKMAG00000021725	si:ch1073-335m2.2	99	75.000	Kryptolebias_marmoratus
ENSCSEG00000003915	-	84	72.951	ENSLBEG00000019129	-	100	71.771	Labrus_bergylta
ENSCSEG00000003915	-	73	85.802	ENSLACG00000003258	SPEN	82	83.708	Latimeria_chalumnae
ENSCSEG00000003915	-	96	76.331	ENSLOCG00000007896	si:ch1073-335m2.2	97	84.828	Lepisosteus_oculatus
ENSCSEG00000003915	-	99	45.558	ENSLAFG00000004524	SPEN	96	81.046	Loxodonta_africana
ENSCSEG00000003915	-	90	48.434	ENSMFAG00000041974	SPEN	68	84.270	Macaca_fascicularis
ENSCSEG00000003915	-	90	48.434	ENSMMUG00000008026	SPEN	68	84.270	Macaca_mulatta
ENSCSEG00000003915	-	90	48.353	ENSMNEG00000042402	SPEN	68	84.270	Macaca_nemestrina
ENSCSEG00000003915	-	90	47.652	ENSMLEG00000039293	SPEN	68	73.034	Mandrillus_leucophaeus
ENSCSEG00000003915	-	97	73.632	ENSMAMG00000023870	si:ch1073-335m2.2	52	73.632	Mastacembelus_armatus
ENSCSEG00000003915	-	89	72.956	ENSMZEG00005021491	-	99	73.113	Maylandia_zebra
ENSCSEG00000003915	-	74	77.473	ENSMZEG00005011762	si:ch1073-335m2.2	99	75.385	Maylandia_zebra
ENSCSEG00000003915	-	95	51.004	ENSMAUG00000008318	Spen	97	84.270	Mesocricetus_auratus
ENSCSEG00000003915	-	99	44.976	ENSMICG00000030994	SPEN	68	83.708	Microcebus_murinus
ENSCSEG00000003915	-	89	47.826	ENSMOCG00000016083	Spen	96	84.270	Microtus_ochrogaster
ENSCSEG00000003915	-	99	50.884	ENSMODG00000003411	SPEN	96	49.546	Monodelphis_domestica
ENSCSEG00000003915	-	100	78.297	ENSMALG00000008625	-	100	77.370	Monopterus_albus
ENSCSEG00000003915	-	90	48.439	MGP_CAROLIEiJ_G0026745	Spen	97	83.708	Mus_caroli
ENSCSEG00000003915	-	90	48.296	ENSMUSG00000040761	Spen	97	84.270	Mus_musculus
ENSCSEG00000003915	-	90	47.633	MGP_PahariEiJ_G0029076	Spen	97	83.708	Mus_pahari
ENSCSEG00000003915	-	89	48.540	MGP_SPRETEiJ_G0027724	Spen	97	83.708	Mus_spretus
ENSCSEG00000003915	-	87	83.333	ENSMPUG00000016317	SPEN	67	77.273	Mustela_putorius_furo
ENSCSEG00000003915	-	94	88.172	ENSMLUG00000010144	SPEN	98	79.292	Myotis_lucifugus
ENSCSEG00000003915	-	97	45.121	ENSNGAG00000000641	Spen	93	84.270	Nannospalax_galili
ENSCSEG00000003915	-	85	72.038	ENSNBRG00000022090	-	100	72.204	Neolamprologus_brichardi
ENSCSEG00000003915	-	74	78.022	ENSNBRG00000005733	si:ch1073-335m2.2	99	75.385	Neolamprologus_brichardi
ENSCSEG00000003915	-	90	47.550	ENSNLEG00000007652	SPEN	68	81.046	Nomascus_leucogenys
ENSCSEG00000003915	-	93	84.375	ENSMEUG00000002422	SPEN	82	84.375	Notamacropus_eugenii
ENSCSEG00000003915	-	72	60.789	ENSOPRG00000015800	SPEN	68	82.000	Ochotona_princeps
ENSCSEG00000003915	-	95	48.766	ENSODEG00000016644	SPEN	99	84.270	Octodon_degus
ENSCSEG00000003915	-	100	73.509	ENSONIG00000006573	-	99	86.935	Oreochromis_niloticus
ENSCSEG00000003915	-	90	44.185	ENSOCUG00000010840	SPEN	69	64.118	Oryctolagus_cuniculus
ENSCSEG00000003915	-	87	62.876	ENSORLG00000028894	-	100	61.792	Oryzias_latipes
ENSCSEG00000003915	-	87	63.278	ENSORLG00020007735	-	100	62.303	Oryzias_latipes_hni
ENSCSEG00000003915	-	99	65.585	ENSORLG00015022085	-	100	64.446	Oryzias_latipes_hsok
ENSCSEG00000003915	-	86	82.099	ENSORLG00015005537	si:ch1073-335m2.2	54	67.290	Oryzias_latipes_hsok
ENSCSEG00000003915	-	97	67.431	ENSOMEG00000004509	si:ch1073-335m2.2	100	67.431	Oryzias_melastigma
ENSCSEG00000003915	-	99	65.689	ENSOMEG00000007639	-	100	64.374	Oryzias_melastigma
ENSCSEG00000003915	-	94	51.581	ENSOGAG00000025110	SPEN	83	84.270	Otolemur_garnettii
ENSCSEG00000003915	-	99	46.254	ENSOARG00000008477	SPEN	96	76.023	Ovis_aries
ENSCSEG00000003915	-	90	47.364	ENSPPAG00000035690	SPEN	68	81.333	Pan_paniscus
ENSCSEG00000003915	-	91	47.986	ENSPTRG00000000210	SPEN	68	84.270	Pan_troglodytes
ENSCSEG00000003915	-	90	47.802	ENSPANG00000006293	SPEN	68	84.270	Papio_anubis
ENSCSEG00000003915	-	99	56.187	ENSPKIG00000002617	SPEN	90	69.427	Paramormyrops_kingsleyae
ENSCSEG00000003915	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	99	100.000	Paramormyrops_kingsleyae
ENSCSEG00000003915	-	51	81.457	ENSPSIG00000008026	SPEN	99	81.457	Pelodiscus_sinensis
ENSCSEG00000003915	-	89	46.826	ENSPEMG00000022997	Spen	85	80.000	Peromyscus_maniculatus_bairdii
ENSCSEG00000003915	-	98	64.143	ENSPFOG00000017986	si:ch1073-335m2.2	100	64.143	Poecilia_formosa
ENSCSEG00000003915	-	95	64.143	ENSPLAG00000016625	si:ch1073-335m2.2	100	64.143	Poecilia_latipinna
ENSCSEG00000003915	-	98	64.143	ENSPMEG00000002674	si:ch1073-335m2.2	100	64.143	Poecilia_mexicana
ENSCSEG00000003915	-	100	73.478	ENSPMEG00000006764	-	99	73.478	Poecilia_mexicana
ENSCSEG00000003915	-	100	73.323	ENSPREG00000010399	-	99	73.323	Poecilia_reticulata
ENSCSEG00000003915	-	99	64.400	ENSPREG00000005357	si:ch1073-335m2.2	100	64.400	Poecilia_reticulata
ENSCSEG00000003915	-	91	47.764	ENSPPYG00000001834	SPEN	68	84.270	Pongo_abelii
ENSCSEG00000003915	-	87	70.690	ENSPCAG00000009543	SPEN	86	77.551	Procavia_capensis
ENSCSEG00000003915	-	99	44.581	ENSPCOG00000021735	SPEN	67	83.708	Propithecus_coquereli
ENSCSEG00000003915	-	72	68.354	ENSPVAG00000013794	SPEN	68	83.708	Pteropus_vampyrus
ENSCSEG00000003915	-	74	77.473	ENSPNYG00000009042	si:ch1073-335m2.2	99	75.385	Pundamilia_nyererei
ENSCSEG00000003915	-	100	76.765	ENSPNYG00000012379	-	99	76.765	Pundamilia_nyererei
ENSCSEG00000003915	-	100	60.000	ENSPNAG00000020795	spen	87	70.701	Pygocentrus_nattereri
ENSCSEG00000003915	-	98	78.804	ENSPNAG00000011452	si:ch1073-335m2.2	100	78.804	Pygocentrus_nattereri
ENSCSEG00000003915	-	90	46.478	ENSRNOG00000033556	Spen	97	81.457	Rattus_norvegicus
ENSCSEG00000003915	-	90	47.764	ENSRBIG00000039654	SPEN	67	81.333	Rhinopithecus_bieti
ENSCSEG00000003915	-	88	71.983	ENSRROG00000035686	SPEN	64	81.046	Rhinopithecus_roxellana
ENSCSEG00000003915	-	88	48.107	ENSSBOG00000028770	SPEN	67	81.046	Saimiri_boliviensis_boliviensis
ENSCSEG00000003915	-	99	44.944	ENSSHAG00000004960	SPEN	98	79.396	Sarcophilus_harrisii
ENSCSEG00000003915	-	99	57.078	ENSSFOG00015010267	si:ch1073-335m2.2	100	53.406	Scleropages_formosus
ENSCSEG00000003915	-	86	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	100	54.111	Scleropages_formosus
ENSCSEG00000003915	-	87	68.000	ENSSMAG00000000125	si:ch1073-335m2.2	100	68.000	Scophthalmus_maximus
ENSCSEG00000003915	-	100	80.083	ENSSMAG00000008996	-	100	79.167	Scophthalmus_maximus
ENSCSEG00000003915	-	95	69.196	ENSSDUG00000008416	si:ch1073-335m2.2	100	69.196	Seriola_dumerili
ENSCSEG00000003915	-	100	81.846	ENSSDUG00000003476	-	87	96.067	Seriola_dumerili
ENSCSEG00000003915	-	100	81.795	ENSSLDG00000012950	-	87	96.067	Seriola_lalandi_dorsalis
ENSCSEG00000003915	-	98	69.196	ENSSLDG00000023347	si:ch1073-335m2.2	100	69.196	Seriola_lalandi_dorsalis
ENSCSEG00000003915	-	85	46.095	ENSSPUG00000001866	-	100	46.602	Sphenodon_punctatus
ENSCSEG00000003915	-	100	78.619	ENSSPAG00000006014	-	100	78.349	Stegastes_partitus
ENSCSEG00000003915	-	98	78.919	ENSSPAG00000012454	si:ch1073-335m2.2	100	78.919	Stegastes_partitus
ENSCSEG00000003915	-	86	46.218	ENSSSCG00000034484	SPEN	62	84.270	Sus_scrofa
ENSCSEG00000003915	-	100	72.591	ENSTRUG00000024350	-	98	72.901	Takifugu_rubripes
ENSCSEG00000003915	-	97	82.883	ENSTNIG00000010907	-	100	83.559	Tetraodon_nigroviridis
ENSCSEG00000003915	-	71	83.333	ENSTBEG00000003628	SPEN	60	83.333	Tupaia_belangeri
ENSCSEG00000003915	-	75	73.272	ENSTTRG00000015704	SPEN	69	81.333	Tursiops_truncatus
ENSCSEG00000003915	-	96	83.889	ENSUAMG00000009600	SPEN	82	84.270	Ursus_americanus
ENSCSEG00000003915	-	96	83.889	ENSUMAG00000021641	SPEN	67	78.981	Ursus_maritimus
ENSCSEG00000003915	-	88	100.000	ENSVVUG00000028951	SPEN	62	100.000	Vulpes_vulpes
ENSCSEG00000003915	-	99	64.400	ENSXCOG00000004516	si:ch1073-335m2.2	99	64.400	Xiphophorus_couchianus
ENSCSEG00000003915	-	100	73.013	ENSXMAG00000021384	-	99	73.013	Xiphophorus_maculatus
ENSCSEG00000003915	-	99	64.143	ENSXMAG00000029887	si:ch1073-335m2.2	78	79.651	Xiphophorus_maculatus