EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000003986 (Gene tree)
Gene ID: 103382483
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6502 bases
Position: chr8:16639262-16645763
Accession: 103382483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000006188	RtcB	PF01139.17	2.4e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000006257	-	3857	XM_008315299	ENSCSEP00000006188	505 (aa)	XP_008313521	UPI000495D879

Gene Model

Click here to download ENSCSEG00000003986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000003986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000003986	rtcb	100	93.861	ENSG00000100220	RTCB	100	93.861	Homo_sapiens
ENSCSEG00000003986	rtcb	100	96.634	ENSAPOG00000006040	rtcb	100	96.634	Acanthochromis_polyacanthus
ENSCSEG00000003986	rtcb	100	93.861	ENSAMEG00000016152	RTCB	100	93.861	Ailuropoda_melanoleuca
ENSCSEG00000003986	rtcb	100	91.881	ENSACIG00000009083	rtcb	100	91.881	Amphilophus_citrinellus
ENSCSEG00000003986	rtcb	100	97.030	ENSAOCG00000005662	rtcb	100	97.609	Amphiprion_ocellaris
ENSCSEG00000003986	rtcb	96	92.197	ENSAPEG00000024653	rtcb	100	92.197	Amphiprion_percula
ENSCSEG00000003986	rtcb	100	97.030	ENSAPEG00000024701	rtcb	100	97.030	Amphiprion_percula
ENSCSEG00000003986	rtcb	100	97.228	ENSATEG00000000618	rtcb	100	97.228	Anabas_testudineus
ENSCSEG00000003986	rtcb	100	90.366	ENSACAG00000014817	RTCB	100	90.366	Anolis_carolinensis
ENSCSEG00000003986	rtcb	72	97.222	ENSANAG00000023724	-	86	97.222	Aotus_nancymaae
ENSCSEG00000003986	rtcb	100	79.406	ENSANAG00000018191	-	91	79.406	Aotus_nancymaae
ENSCSEG00000003986	rtcb	100	94.653	ENSACLG00000008367	rtcb	100	95.652	Astatotilapia_calliptera
ENSCSEG00000003986	rtcb	100	95.248	ENSAMXG00000042320	rtcb	100	95.248	Astyanax_mexicanus
ENSCSEG00000003986	rtcb	100	94.257	ENSBTAG00000011070	RTCB	100	94.257	Bos_taurus
ENSCSEG00000003986	rtcb	100	73.069	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSCSEG00000003986	rtcb	100	94.059	ENSCJAG00000006128	RTCB	100	94.059	Callithrix_jacchus
ENSCSEG00000003986	rtcb	100	93.861	ENSCAFG00000001785	RTCB	100	93.861	Canis_familiaris
ENSCSEG00000003986	rtcb	100	89.703	ENSCAFG00000010789	-	100	89.703	Canis_familiaris
ENSCSEG00000003986	rtcb	87	89.545	ENSCAFG00020018953	-	99	89.545	Canis_lupus_dingo
ENSCSEG00000003986	rtcb	100	93.861	ENSCAFG00020004890	-	100	93.861	Canis_lupus_dingo
ENSCSEG00000003986	rtcb	100	94.059	ENSCHIG00000027009	-	100	94.059	Capra_hircus
ENSCSEG00000003986	rtcb	100	94.059	ENSTSYG00000012320	RTCB	100	94.059	Carlito_syrichta
ENSCSEG00000003986	rtcb	94	93.501	ENSCAPG00000011647	RTCB	96	93.501	Cavia_aperea
ENSCSEG00000003986	rtcb	100	94.059	ENSCCAG00000000618	RTCB	100	94.059	Cebus_capucinus
ENSCSEG00000003986	rtcb	100	93.861	ENSCATG00000033424	RTCB	100	93.861	Cercocebus_atys
ENSCSEG00000003986	rtcb	100	93.861	ENSCLAG00000007997	RTCB	100	93.861	Chinchilla_lanigera
ENSCSEG00000003986	rtcb	100	94.059	ENSCSAG00000008351	RTCB	100	94.059	Chlorocebus_sabaeus
ENSCSEG00000003986	rtcb	100	80.792	ENSCHOG00000009123	RTCB	100	80.792	Choloepus_hoffmanni
ENSCSEG00000003986	rtcb	100	93.069	ENSCPBG00000023184	RTCB	100	93.069	Chrysemys_picta_bellii
ENSCSEG00000003986	rtcb	100	81.782	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSCSEG00000003986	rtcb	100	82.178	ENSCSAVG00000008124	-	100	81.549	Ciona_savignyi
ENSCSEG00000003986	rtcb	100	90.099	ENSCANG00000001891	RTCB	100	90.099	Colobus_angolensis_palliatus
ENSCSEG00000003986	rtcb	100	93.465	ENSCGRG00001011173	Rtcb	100	93.465	Cricetulus_griseus_chok1gshd
ENSCSEG00000003986	rtcb	93	94.468	ENSCGRG00000009587	-	96	94.468	Cricetulus_griseus_crigri
ENSCSEG00000003986	rtcb	82	94.952	ENSCVAG00000000569	rtcb	95	94.952	Cyprinodon_variegatus
ENSCSEG00000003986	rtcb	100	95.644	ENSDARG00000101047	rtcb	100	95.644	Danio_rerio
ENSCSEG00000003986	rtcb	80	90.172	ENSDNOG00000012425	RTCB	99	90.172	Dasypus_novemcinctus
ENSCSEG00000003986	rtcb	100	93.861	ENSDORG00000010855	Rtcb	100	93.861	Dipodomys_ordii
ENSCSEG00000003986	rtcb	99	84.692	FBgn0032781	RtcB	99	84.692	Drosophila_melanogaster
ENSCSEG00000003986	rtcb	100	88.119	ENSETEG00000001988	RTCB	100	88.119	Echinops_telfairi
ENSCSEG00000003986	rtcb	100	85.941	ENSEBUG00000014235	rtcb	100	85.941	Eptatretus_burgeri
ENSCSEG00000003986	rtcb	100	93.663	ENSEASG00005019059	RTCB	100	93.663	Equus_asinus_asinus
ENSCSEG00000003986	rtcb	100	93.663	ENSECAG00000023998	RTCB	100	93.663	Equus_caballus
ENSCSEG00000003986	rtcb	89	84.787	ENSEEUG00000006251	RTCB	100	84.787	Erinaceus_europaeus
ENSCSEG00000003986	rtcb	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSCSEG00000003986	rtcb	100	93.861	ENSFCAG00000026480	RTCB	100	93.861	Felis_catus
ENSCSEG00000003986	rtcb	100	93.861	ENSFALG00000013334	RTCB	100	93.861	Ficedula_albicollis
ENSCSEG00000003986	rtcb	100	93.663	ENSFDAG00000018150	RTCB	100	93.663	Fukomys_damarensis
ENSCSEG00000003986	rtcb	100	96.634	ENSFHEG00000009595	rtcb	100	96.634	Fundulus_heteroclitus
ENSCSEG00000003986	rtcb	100	92.079	ENSGMOG00000018882	rtcb	100	92.079	Gadus_morhua
ENSCSEG00000003986	rtcb	100	93.663	ENSGALG00000012611	RTCB	100	93.663	Gallus_gallus
ENSCSEG00000003986	rtcb	100	95.842	ENSGAFG00000004198	rtcb	100	95.842	Gambusia_affinis
ENSCSEG00000003986	rtcb	100	95.248	ENSGACG00000000586	rtcb	100	95.248	Gasterosteus_aculeatus
ENSCSEG00000003986	rtcb	93	92.128	ENSGAGG00000019133	RTCB	98	92.128	Gopherus_agassizii
ENSCSEG00000003986	rtcb	100	93.861	ENSGGOG00000011402	RTCB	100	93.861	Gorilla_gorilla
ENSCSEG00000003986	rtcb	100	94.653	ENSHBUG00000020571	rtcb	100	94.653	Haplochromis_burtoni
ENSCSEG00000003986	rtcb	100	93.663	ENSHGLG00000004492	RTCB	100	93.663	Heterocephalus_glaber_female
ENSCSEG00000003986	rtcb	93	68.230	ENSHGLG00000001066	-	99	68.230	Heterocephalus_glaber_female
ENSCSEG00000003986	rtcb	100	93.663	ENSHGLG00100008965	RTCB	100	93.663	Heterocephalus_glaber_male
ENSCSEG00000003986	rtcb	100	93.688	ENSHCOG00000006450	rtcb	100	93.688	Hippocampus_comes
ENSCSEG00000003986	rtcb	100	94.059	ENSIPUG00000015443	rtcb	100	94.059	Ictalurus_punctatus
ENSCSEG00000003986	rtcb	100	93.861	ENSSTOG00000003878	RTCB	100	93.861	Ictidomys_tridecemlineatus
ENSCSEG00000003986	rtcb	100	93.663	ENSJJAG00000010667	Rtcb	100	93.663	Jaculus_jaculus
ENSCSEG00000003986	rtcb	100	96.436	ENSKMAG00000013178	rtcb	100	96.436	Kryptolebias_marmoratus
ENSCSEG00000003986	rtcb	100	95.644	ENSLBEG00000000214	rtcb	100	95.644	Labrus_bergylta
ENSCSEG00000003986	rtcb	100	96.436	ENSLBEG00000010566	RTCB	100	96.436	Labrus_bergylta
ENSCSEG00000003986	rtcb	100	93.861	ENSLACG00000013033	RTCB	100	93.861	Latimeria_chalumnae
ENSCSEG00000003986	rtcb	100	95.248	ENSLOCG00000016515	rtcb	99	95.248	Lepisosteus_oculatus
ENSCSEG00000003986	rtcb	100	93.663	ENSLAFG00000002082	RTCB	100	93.663	Loxodonta_africana
ENSCSEG00000003986	rtcb	100	94.059	ENSMFAG00000034419	RTCB	100	94.059	Macaca_fascicularis
ENSCSEG00000003986	rtcb	100	94.059	ENSMMUG00000006720	RTCB	100	94.059	Macaca_mulatta
ENSCSEG00000003986	rtcb	100	94.059	ENSMNEG00000040669	RTCB	100	94.059	Macaca_nemestrina
ENSCSEG00000003986	rtcb	100	93.861	ENSMLEG00000040505	RTCB	100	93.861	Mandrillus_leucophaeus
ENSCSEG00000003986	rtcb	100	96.634	ENSMAMG00000020676	rtcb	100	96.634	Mastacembelus_armatus
ENSCSEG00000003986	rtcb	100	94.653	ENSMZEG00005018942	rtcb	100	94.653	Maylandia_zebra
ENSCSEG00000003986	rtcb	100	93.294	ENSMGAG00000012805	RTCB	100	93.294	Meleagris_gallopavo
ENSCSEG00000003986	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSCSEG00000003986	rtcb	100	74.455	ENSMICG00000036677	-	100	74.455	Microcebus_murinus
ENSCSEG00000003986	rtcb	100	94.059	ENSMICG00000013303	-	100	94.059	Microcebus_murinus
ENSCSEG00000003986	rtcb	100	93.861	ENSMOCG00000002440	Rtcb	100	93.861	Microtus_ochrogaster
ENSCSEG00000003986	rtcb	100	96.832	ENSMMOG00000005987	rtcb	100	96.832	Mola_mola
ENSCSEG00000003986	rtcb	100	93.663	ENSMODG00000001414	RTCB	100	93.663	Monodelphis_domestica
ENSCSEG00000003986	rtcb	100	97.228	ENSMALG00000007603	rtcb	100	97.228	Monopterus_albus
ENSCSEG00000003986	rtcb	100	93.861	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.861	Mus_caroli
ENSCSEG00000003986	rtcb	100	93.861	ENSMUSG00000001783	Rtcb	100	93.861	Mus_musculus
ENSCSEG00000003986	rtcb	100	93.861	MGP_PahariEiJ_G0031396	Rtcb	100	93.861	Mus_pahari
ENSCSEG00000003986	rtcb	100	93.861	MGP_SPRETEiJ_G0016507	Rtcb	100	93.861	Mus_spretus
ENSCSEG00000003986	rtcb	100	93.861	ENSMPUG00000012285	RTCB	100	93.861	Mustela_putorius_furo
ENSCSEG00000003986	rtcb	100	91.519	ENSMLUG00000007803	RTCB	100	91.519	Myotis_lucifugus
ENSCSEG00000003986	rtcb	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSCSEG00000003986	rtcb	100	94.653	ENSNBRG00000017202	rtcb	100	94.653	Neolamprologus_brichardi
ENSCSEG00000003986	rtcb	100	93.861	ENSNLEG00000004960	RTCB	100	93.861	Nomascus_leucogenys
ENSCSEG00000003986	rtcb	100	70.495	ENSMEUG00000007809	-	100	70.495	Notamacropus_eugenii
ENSCSEG00000003986	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSCSEG00000003986	rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSCSEG00000003986	rtcb	100	62.574	ENSODEG00000005042	-	100	62.574	Octodon_degus
ENSCSEG00000003986	rtcb	100	95.446	ENSONIG00000007474	rtcb	100	95.446	Oreochromis_niloticus
ENSCSEG00000003986	rtcb	100	93.465	ENSOANG00000005524	RTCB	100	93.465	Ornithorhynchus_anatinus
ENSCSEG00000003986	rtcb	93	93.404	ENSOCUG00000008270	RTCB	96	93.404	Oryctolagus_cuniculus
ENSCSEG00000003986	rtcb	100	95.842	ENSORLG00000020093	rtcb	100	95.842	Oryzias_latipes
ENSCSEG00000003986	rtcb	100	96.040	ENSORLG00020003706	rtcb	100	96.040	Oryzias_latipes_hni
ENSCSEG00000003986	rtcb	100	96.040	ENSORLG00015002968	rtcb	100	96.040	Oryzias_latipes_hsok
ENSCSEG00000003986	rtcb	100	95.644	ENSOMEG00000021278	rtcb	100	95.644	Oryzias_melastigma
ENSCSEG00000003986	rtcb	100	93.465	ENSOGAG00000001425	RTCB	100	93.465	Otolemur_garnettii
ENSCSEG00000003986	rtcb	100	94.059	ENSOARG00000018008	RTCB	100	94.059	Ovis_aries
ENSCSEG00000003986	rtcb	100	93.861	ENSPPAG00000028667	RTCB	100	93.861	Pan_paniscus
ENSCSEG00000003986	rtcb	100	93.861	ENSPPRG00000004038	RTCB	100	93.861	Panthera_pardus
ENSCSEG00000003986	rtcb	94	89.684	ENSPTIG00000020499	RTCB	97	90.737	Panthera_tigris_altaica
ENSCSEG00000003986	rtcb	100	93.861	ENSPTRG00000014287	RTCB	100	93.861	Pan_troglodytes
ENSCSEG00000003986	rtcb	100	94.059	ENSPANG00000016035	RTCB	100	94.059	Papio_anubis
ENSCSEG00000003986	rtcb	100	94.257	ENSPKIG00000001881	rtcb	100	94.257	Paramormyrops_kingsleyae
ENSCSEG00000003986	rtcb	91	94.130	ENSPSIG00000011690	RTCB	100	94.130	Pelodiscus_sinensis
ENSCSEG00000003986	rtcb	100	96.634	ENSPMGG00000016672	rtcb	100	96.634	Periophthalmus_magnuspinnatus
ENSCSEG00000003986	rtcb	100	93.861	ENSPEMG00000019548	Rtcb	100	93.861	Peromyscus_maniculatus_bairdii
ENSCSEG00000003986	rtcb	100	91.881	ENSPMAG00000005657	rtcb	100	91.881	Petromyzon_marinus
ENSCSEG00000003986	rtcb	100	93.663	ENSPCIG00000009467	RTCB	100	93.663	Phascolarctos_cinereus
ENSCSEG00000003986	rtcb	100	96.238	ENSPFOG00000003058	rtcb	100	96.238	Poecilia_formosa
ENSCSEG00000003986	rtcb	100	96.238	ENSPLAG00000017663	rtcb	100	96.238	Poecilia_latipinna
ENSCSEG00000003986	rtcb	100	96.238	ENSPMEG00000006227	rtcb	100	96.238	Poecilia_mexicana
ENSCSEG00000003986	rtcb	100	96.238	ENSPREG00000018467	rtcb	100	96.238	Poecilia_reticulata
ENSCSEG00000003986	rtcb	100	93.861	ENSPPYG00000011752	RTCB	100	93.861	Pongo_abelii
ENSCSEG00000003986	rtcb	93	77.331	ENSPCAG00000013641	RTCB	100	77.331	Procavia_capensis
ENSCSEG00000003986	rtcb	100	94.257	ENSPCOG00000017243	RTCB	100	94.257	Propithecus_coquereli
ENSCSEG00000003986	rtcb	93	92.979	ENSPVAG00000002380	RTCB	100	92.979	Pteropus_vampyrus
ENSCSEG00000003986	rtcb	100	94.653	ENSPNYG00000022760	rtcb	100	94.653	Pundamilia_nyererei
ENSCSEG00000003986	rtcb	100	94.653	ENSPNAG00000009209	rtcb	100	94.653	Pygocentrus_nattereri
ENSCSEG00000003986	rtcb	100	93.861	ENSRNOG00000004813	Rtcb	100	93.861	Rattus_norvegicus
ENSCSEG00000003986	rtcb	100	85.968	ENSRBIG00000042090	RTCB	100	85.968	Rhinopithecus_bieti
ENSCSEG00000003986	rtcb	100	89.307	ENSSBOG00000020085	-	100	89.307	Saimiri_boliviensis_boliviensis
ENSCSEG00000003986	rtcb	94	94.304	ENSSHAG00000016277	RTCB	100	94.304	Sarcophilus_harrisii
ENSCSEG00000003986	rtcb	100	94.653	ENSSFOG00015000763	rtcb	100	94.653	Scleropages_formosus
ENSCSEG00000003986	rtcb	100	93.465	ENSSFOG00015011572	RTCB	100	93.465	Scleropages_formosus
ENSCSEG00000003986	rtcb	100	94.059	ENSSMAG00000005096	rtcb	100	94.059	Scophthalmus_maximus
ENSCSEG00000003986	rtcb	100	97.030	ENSSDUG00000012605	rtcb	100	97.030	Seriola_dumerili
ENSCSEG00000003986	rtcb	100	97.426	ENSSLDG00000019458	rtcb	100	97.426	Seriola_lalandi_dorsalis
ENSCSEG00000003986	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSCSEG00000003986	rtcb	100	93.267	ENSSPUG00000012814	RTCB	100	93.267	Sphenodon_punctatus
ENSCSEG00000003986	rtcb	100	97.030	ENSSPAG00000004623	rtcb	100	97.030	Stegastes_partitus
ENSCSEG00000003986	rtcb	100	93.861	ENSSSCG00000000158	RTCB	100	93.861	Sus_scrofa
ENSCSEG00000003986	rtcb	100	93.861	ENSTGUG00000010947	RTCB	99	93.861	Taeniopygia_guttata
ENSCSEG00000003986	rtcb	91	96.957	ENSTRUG00000009880	rtcb	100	96.957	Takifugu_rubripes
ENSCSEG00000003986	rtcb	100	94.257	ENSTNIG00000002484	rtcb	100	94.257	Tetraodon_nigroviridis
ENSCSEG00000003986	rtcb	100	80.792	ENSTBEG00000004418	RTCB	100	80.792	Tupaia_belangeri
ENSCSEG00000003986	rtcb	93	92.553	ENSTTRG00000006417	RTCB	100	92.553	Tursiops_truncatus
ENSCSEG00000003986	rtcb	100	93.861	ENSUAMG00000022792	RTCB	100	93.861	Ursus_americanus
ENSCSEG00000003986	rtcb	100	93.861	ENSUMAG00000017225	RTCB	100	93.861	Ursus_maritimus
ENSCSEG00000003986	rtcb	100	93.663	ENSVPAG00000005375	RTCB	100	93.663	Vicugna_pacos
ENSCSEG00000003986	rtcb	100	93.861	ENSVVUG00000023408	RTCB	100	94.595	Vulpes_vulpes
ENSCSEG00000003986	rtcb	100	93.069	ENSXETG00000011523	rtcb	100	93.069	Xenopus_tropicalis
ENSCSEG00000003986	rtcb	100	96.238	ENSXMAG00000002855	rtcb	100	96.238	Xiphophorus_maculatus