EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000004009 (Gene tree)
Gene ID: 103383618
Gene Symbol: gatb
Alias: pet112|pet112l|si:ch211-150a22.1|zgc:103736
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 14279 bases
Position: chr9:6757352-6771630
Accession: 103383618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000006233	GatB_Yqey	PF02637.18	2.7e-43	1	1
ENSCSEP00000006220	GatB_Yqey	PF02637.18	3.8e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000006289	-	3440	XM_008316821	ENSCSEP00000006220	549 (aa)	XP_008315043	UPI000496EEFA
ENSCSET00000006301	-	1308	-	ENSCSEP00000006233	435 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000004009's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00970	Aminoacyl-tRNA biosynthesis	KEGG
csem01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004009	gatb	100	62.929	ENSG00000059691	GATB	80	77.113	Homo_sapiens
ENSCSEG00000004009	gatb	100	83.982	ENSAPOG00000022676	gatb	100	82.149	Acanthochromis_polyacanthus
ENSCSEG00000004009	gatb	100	61.591	ENSAMEG00000018434	GATB	90	64.032	Ailuropoda_melanoleuca
ENSCSEG00000004009	gatb	100	80.549	ENSACIG00000015827	gatb	100	81.236	Amphilophus_citrinellus
ENSCSEG00000004009	gatb	100	83.753	ENSAOCG00000009635	gatb	96	85.000	Amphiprion_ocellaris
ENSCSEG00000004009	gatb	100	77.346	ENSAPEG00000023666	gatb	99	76.426	Amphiprion_percula
ENSCSEG00000004009	gatb	100	82.380	ENSATEG00000011821	gatb	100	81.056	Anabas_testudineus
ENSCSEG00000004009	gatb	100	64.760	ENSAPLG00000003933	GATB	99	68.421	Anas_platyrhynchos
ENSCSEG00000004009	gatb	99	64.747	ENSACAG00000002772	GATB	91	67.265	Anolis_carolinensis
ENSCSEG00000004009	gatb	100	61.327	ENSANAG00000020953	GATB	93	62.934	Aotus_nancymaae
ENSCSEG00000004009	gatb	100	81.093	ENSACLG00000026091	gatb	92	80.963	Astatotilapia_calliptera
ENSCSEG00000004009	gatb	100	68.636	ENSAMXG00000021662	gatb	89	70.741	Astyanax_mexicanus
ENSCSEG00000004009	gatb	100	62.929	ENSBTAG00000013914	GATB	93	64.355	Bos_taurus
ENSCSEG00000004009	gatb	100	60.870	ENSCJAG00000002147	GATB	90	63.419	Callithrix_jacchus
ENSCSEG00000004009	gatb	100	62.700	ENSCAFG00000008088	GATB	88	66.531	Canis_familiaris
ENSCSEG00000004009	gatb	100	62.700	ENSCAFG00020026686	GATB	84	72.549	Canis_lupus_dingo
ENSCSEG00000004009	gatb	100	62.700	ENSCHIG00000020111	GATB	90	64.811	Capra_hircus
ENSCSEG00000004009	gatb	100	64.302	ENSTSYG00000009976	GATB	90	66.402	Carlito_syrichta
ENSCSEG00000004009	gatb	99	54.965	ENSCAPG00000010977	GATB	89	58.985	Cavia_aperea
ENSCSEG00000004009	gatb	99	62.125	ENSCPOG00000005023	GATB	93	63.707	Cavia_porcellus
ENSCSEG00000004009	gatb	80	67.614	ENSCCAG00000021445	GATB	86	68.852	Cebus_capucinus
ENSCSEG00000004009	gatb	100	61.785	ENSCATG00000034281	GATB	90	64.215	Cercocebus_atys
ENSCSEG00000004009	gatb	100	61.785	ENSCLAG00000005772	GATB	87	71.046	Chinchilla_lanigera
ENSCSEG00000004009	gatb	100	62.014	ENSCSAG00000003318	GATB	90	64.414	Chlorocebus_sabaeus
ENSCSEG00000004009	gatb	100	61.098	ENSCHOG00000008476	GATB	90	63.817	Choloepus_hoffmanni
ENSCSEG00000004009	gatb	100	64.760	ENSCPBG00000025824	GATB	89	68.219	Chrysemys_picta_bellii
ENSCSEG00000004009	gatb	100	62.243	ENSCANG00000029227	GATB	90	64.612	Colobus_angolensis_palliatus
ENSCSEG00000004009	gatb	100	64.302	ENSCGRG00001024051	GATB	91	69.676	Cricetulus_griseus_chok1gshd
ENSCSEG00000004009	gatb	100	64.302	ENSCGRG00000012974	GATB	91	69.676	Cricetulus_griseus_crigri
ENSCSEG00000004009	gatb	100	80.549	ENSCVAG00000017180	gatb	99	82.329	Cyprinodon_variegatus
ENSCSEG00000004009	gatb	99	71.659	ENSDARG00000037309	gatb	99	69.439	Danio_rerio
ENSCSEG00000004009	gatb	100	61.731	ENSDNOG00000012683	GATB	93	63.077	Dasypus_novemcinctus
ENSCSEG00000004009	gatb	99	61.521	ENSDORG00000010241	Gatb	90	64.200	Dipodomys_ordii
ENSCSEG00000004009	gatb	99	41.244	FBgn0039153	GatB	94	44.919	Drosophila_melanogaster
ENSCSEG00000004009	gatb	91	48.111	ENSETEG00000002356	GATB	88	47.658	Echinops_telfairi
ENSCSEG00000004009	gatb	57	45.817	ENSEBUG00000005611	-	95	46.215	Eptatretus_burgeri
ENSCSEG00000004009	gatb	99	64.138	ENSEASG00005015868	GATB	90	66.267	Equus_asinus_asinus
ENSCSEG00000004009	gatb	99	62.299	ENSECAG00000003539	GATB	90	64.671	Equus_caballus
ENSCSEG00000004009	gatb	82	59.779	ENSEEUG00000002311	GATB	76	63.501	Erinaceus_europaeus
ENSCSEG00000004009	gatb	100	72.540	ENSELUG00000013584	gatb	97	74.549	Esox_lucius
ENSCSEG00000004009	gatb	100	62.471	ENSFCAG00000003207	GATB	90	64.811	Felis_catus
ENSCSEG00000004009	gatb	100	63.158	ENSFALG00000002209	GATB	99	64.955	Ficedula_albicollis
ENSCSEG00000004009	gatb	99	61.751	ENSFDAG00000006426	GATB	92	67.898	Fukomys_damarensis
ENSCSEG00000004009	gatb	100	78.719	ENSFHEG00000008643	GATB	100	76.685	Fundulus_heteroclitus
ENSCSEG00000004009	gatb	100	72.769	ENSGMOG00000001575	gatb	100	74.593	Gadus_morhua
ENSCSEG00000004009	gatb	100	63.844	ENSGALG00000010097	GATB	91	67.611	Gallus_gallus
ENSCSEG00000004009	gatb	100	78.032	ENSGAFG00000014422	gatb	100	76.364	Gambusia_affinis
ENSCSEG00000004009	gatb	99	80.046	ENSGACG00000017143	gatb	99	80.244	Gasterosteus_aculeatus
ENSCSEG00000004009	gatb	100	64.302	ENSGAGG00000007826	GATB	89	67.814	Gopherus_agassizii
ENSCSEG00000004009	gatb	100	62.700	ENSGGOG00000011099	GATB	90	65.209	Gorilla_gorilla
ENSCSEG00000004009	gatb	98	81.542	ENSHBUG00000009656	gatb	98	79.444	Haplochromis_burtoni
ENSCSEG00000004009	gatb	100	61.556	ENSHGLG00000001316	GATB	89	69.718	Heterocephalus_glaber_female
ENSCSEG00000004009	gatb	100	61.556	ENSHGLG00100004289	GATB	89	69.811	Heterocephalus_glaber_male
ENSCSEG00000004009	gatb	100	74.429	ENSHCOG00000006270	gatb	99	71.455	Hippocampus_comes
ENSCSEG00000004009	gatb	100	71.167	ENSIPUG00000013560	gatb	100	69.510	Ictalurus_punctatus
ENSCSEG00000004009	gatb	99	63.448	ENSSTOG00000005689	GATB	90	65.669	Ictidomys_tridecemlineatus
ENSCSEG00000004009	gatb	100	61.785	ENSJJAG00000016979	Gatb	92	68.349	Jaculus_jaculus
ENSCSEG00000004009	gatb	100	80.092	ENSKMAG00000004727	gatb	100	78.506	Kryptolebias_marmoratus
ENSCSEG00000004009	gatb	100	81.465	ENSLBEG00000019511	gatb	100	80.510	Labrus_bergylta
ENSCSEG00000004009	gatb	99	58.161	ENSLACG00000004352	GATB	96	62.725	Latimeria_chalumnae
ENSCSEG00000004009	gatb	100	58.961	ENSLOCG00000008564	gatb	100	58.961	Lepisosteus_oculatus
ENSCSEG00000004009	gatb	100	63.616	ENSLAFG00000022607	GATB	90	66.004	Loxodonta_africana
ENSCSEG00000004009	gatb	100	62.014	ENSMMUG00000011048	GATB	90	64.414	Macaca_mulatta
ENSCSEG00000004009	gatb	100	61.785	ENSMNEG00000040147	GATB	90	64.215	Macaca_nemestrina
ENSCSEG00000004009	gatb	100	62.243	ENSMLEG00000042135	GATB	90	64.612	Mandrillus_leucophaeus
ENSCSEG00000004009	gatb	100	82.151	ENSMAMG00000013256	gatb	100	79.781	Mastacembelus_armatus
ENSCSEG00000004009	gatb	100	81.693	ENSMZEG00005008495	gatb	100	79.599	Maylandia_zebra
ENSCSEG00000004009	gatb	100	64.302	ENSMGAG00000004276	GATB	97	67.748	Meleagris_gallopavo
ENSCSEG00000004009	gatb	100	64.073	ENSMAUG00000019099	Gatb	91	69.213	Mesocricetus_auratus
ENSCSEG00000004009	gatb	100	62.014	ENSMICG00000004311	GATB	89	64.612	Microcebus_murinus
ENSCSEG00000004009	gatb	100	62.700	ENSMOCG00000017566	Gatb	91	69.213	Microtus_ochrogaster
ENSCSEG00000004009	gatb	100	63.844	ENSMMOG00000005376	gatb	88	67.194	Mola_mola
ENSCSEG00000004009	gatb	99	64.138	ENSMODG00000001031	GATB	92	65.810	Monodelphis_domestica
ENSCSEG00000004009	gatb	98	80.841	ENSMALG00000003418	gatb	99	78.704	Monopterus_albus
ENSCSEG00000004009	gatb	100	62.700	MGP_CAROLIEiJ_G0025120	Gatb	92	68.119	Mus_caroli
ENSCSEG00000004009	gatb	100	62.929	ENSMUSG00000028085	Gatb	90	69.249	Mus_musculus
ENSCSEG00000004009	gatb	100	62.700	MGP_PahariEiJ_G0026563	Gatb	90	69.014	Mus_pahari
ENSCSEG00000004009	gatb	100	62.929	MGP_SPRETEiJ_G0026062	Gatb	92	64.258	Mus_spretus
ENSCSEG00000004009	gatb	100	62.471	ENSMPUG00000007394	GATB	90	64.811	Mustela_putorius_furo
ENSCSEG00000004009	gatb	100	63.158	ENSMLUG00000008194	GATB	90	65.606	Myotis_lucifugus
ENSCSEG00000004009	gatb	100	62.471	ENSNGAG00000002152	Gatb	88	70.335	Nannospalax_galili
ENSCSEG00000004009	gatb	100	81.549	ENSNBRG00000005947	gatb	100	82.232	Neolamprologus_brichardi
ENSCSEG00000004009	gatb	100	62.700	ENSNLEG00000005836	GATB	90	65.010	Nomascus_leucogenys
ENSCSEG00000004009	gatb	99	61.839	ENSMEUG00000001479	GATB	99	64.646	Notamacropus_eugenii
ENSCSEG00000004009	gatb	100	62.243	ENSOPRG00000011496	GATB	92	64.453	Ochotona_princeps
ENSCSEG00000004009	gatb	100	59.954	ENSODEG00000005429	GATB	92	66.743	Octodon_degus
ENSCSEG00000004009	gatb	100	82.151	ENSONIG00000010059	gatb	100	79.964	Oreochromis_niloticus
ENSCSEG00000004009	gatb	99	63.908	ENSOANG00000005282	GATB	99	64.368	Ornithorhynchus_anatinus
ENSCSEG00000004009	gatb	100	62.243	ENSOCUG00000016875	GATB	95	62.998	Oryctolagus_cuniculus
ENSCSEG00000004009	gatb	99	76.905	ENSORLG00000007740	gatb	100	78.788	Oryzias_latipes
ENSCSEG00000004009	gatb	99	78.899	ENSORLG00020016385	gatb	99	77.007	Oryzias_latipes_hni
ENSCSEG00000004009	gatb	99	77.982	ENSOMEG00000003089	gatb	99	77.372	Oryzias_melastigma
ENSCSEG00000004009	gatb	100	61.556	ENSOGAG00000014181	GATB	89	65.121	Otolemur_garnettii
ENSCSEG00000004009	gatb	100	62.273	ENSOARG00000004355	GATB	93	63.602	Ovis_aries
ENSCSEG00000004009	gatb	100	62.929	ENSPPAG00000041690	GATB	90	65.408	Pan_paniscus
ENSCSEG00000004009	gatb	100	62.471	ENSPPRG00000004993	GATB	90	64.811	Panthera_pardus
ENSCSEG00000004009	gatb	100	62.471	ENSPTIG00000021433	GATB	90	64.811	Panthera_tigris_altaica
ENSCSEG00000004009	gatb	100	59.725	ENSPTRG00000016513	GATB	90	62.624	Pan_troglodytes
ENSCSEG00000004009	gatb	100	59.039	ENSPANG00000024036	GATB	93	60.886	Papio_anubis
ENSCSEG00000004009	gatb	100	68.879	ENSPKIG00000017076	gatb	96	71.227	Paramormyrops_kingsleyae
ENSCSEG00000004009	gatb	100	64.073	ENSPSIG00000017832	GATB	90	67.611	Pelodiscus_sinensis
ENSCSEG00000004009	gatb	100	64.989	ENSPMGG00000016497	gatb	89	67.400	Periophthalmus_magnuspinnatus
ENSCSEG00000004009	gatb	100	62.929	ENSPEMG00000011096	Gatb	88	70.504	Peromyscus_maniculatus_bairdii
ENSCSEG00000004009	gatb	99	63.908	ENSPCIG00000015213	GATB	92	65.613	Phascolarctos_cinereus
ENSCSEG00000004009	gatb	100	77.955	ENSPFOG00000009933	gatb	100	76.311	Poecilia_formosa
ENSCSEG00000004009	gatb	100	78.490	ENSPLAG00000015569	gatb	100	76.727	Poecilia_latipinna
ENSCSEG00000004009	gatb	100	78.261	ENSPMEG00000006100	gatb	100	76.545	Poecilia_mexicana
ENSCSEG00000004009	gatb	100	78.032	ENSPREG00000000128	gatb	100	75.636	Poecilia_reticulata
ENSCSEG00000004009	gatb	100	62.700	ENSPPYG00000015121	GATB	90	65.010	Pongo_abelii
ENSCSEG00000004009	gatb	100	48.284	ENSPCAG00000005950	GATB	90	52.485	Procavia_capensis
ENSCSEG00000004009	gatb	100	62.014	ENSPCOG00000021777	GATB	91	64.612	Propithecus_coquereli
ENSCSEG00000004009	gatb	100	62.014	ENSPVAG00000006891	GATB	91	64.032	Pteropus_vampyrus
ENSCSEG00000004009	gatb	100	81.693	ENSPNYG00000013884	gatb	100	79.599	Pundamilia_nyererei
ENSCSEG00000004009	gatb	100	73.913	ENSPNAG00000020150	gatb	94	72.692	Pygocentrus_nattereri
ENSCSEG00000004009	gatb	100	61.556	ENSRNOG00000037655	Gatb	92	63.086	Rattus_norvegicus
ENSCSEG00000004009	gatb	100	62.471	ENSRBIG00000006453	GATB	90	64.811	Rhinopithecus_bieti
ENSCSEG00000004009	gatb	100	62.471	ENSRROG00000041575	GATB	90	64.811	Rhinopithecus_roxellana
ENSCSEG00000004009	gatb	96	30.989	YBL080C	-	91	32.115	Saccharomyces_cerevisiae
ENSCSEG00000004009	gatb	100	61.098	ENSSBOG00000022495	GATB	90	63.618	Saimiri_boliviensis_boliviensis
ENSCSEG00000004009	gatb	99	62.759	ENSSHAG00000011763	GATB	96	62.524	Sarcophilus_harrisii
ENSCSEG00000004009	gatb	100	70.252	ENSSFOG00015015565	gatb	98	67.636	Scleropages_formosus
ENSCSEG00000004009	gatb	100	82.838	ENSSMAG00000003609	gatb	76	80.510	Scophthalmus_maximus
ENSCSEG00000004009	gatb	99	83.257	ENSSDUG00000019847	gatb	99	81.569	Seriola_dumerili
ENSCSEG00000004009	gatb	99	82.569	ENSSLDG00000010253	gatb	96	83.968	Seriola_lalandi_dorsalis
ENSCSEG00000004009	gatb	69	63.300	ENSSARG00000003212	GATB	69	63.300	Sorex_araneus
ENSCSEG00000004009	gatb	99	63.218	ENSSPUG00000014453	GATB	95	66.870	Sphenodon_punctatus
ENSCSEG00000004009	gatb	100	83.524	ENSSPAG00000014465	gatb	99	84.600	Stegastes_partitus
ENSCSEG00000004009	gatb	100	63.158	ENSSSCG00000009015	GATB	99	63.387	Sus_scrofa
ENSCSEG00000004009	gatb	100	64.302	ENSTGUG00000004986	GATB	99	68.016	Taeniopygia_guttata
ENSCSEG00000004009	gatb	100	70.470	ENSTRUG00000015238	gatb	92	72.549	Takifugu_rubripes
ENSCSEG00000004009	gatb	93	77.206	ENSTNIG00000003378	gatb	99	78.186	Tetraodon_nigroviridis
ENSCSEG00000004009	gatb	79	50.291	ENSTBEG00000009804	GATB	88	50.116	Tupaia_belangeri
ENSCSEG00000004009	gatb	100	63.387	ENSTTRG00000010679	GATB	90	65.606	Tursiops_truncatus
ENSCSEG00000004009	gatb	100	62.700	ENSUAMG00000021441	GATB	90	65.010	Ursus_americanus
ENSCSEG00000004009	gatb	100	62.700	ENSUMAG00000016157	GATB	90	65.010	Ursus_maritimus
ENSCSEG00000004009	gatb	75	76.744	ENSVPAG00000010844	GATB	66	78.545	Vicugna_pacos
ENSCSEG00000004009	gatb	100	62.700	ENSVVUG00000025083	GATB	89	65.996	Vulpes_vulpes
ENSCSEG00000004009	gatb	99	66.055	ENSXETG00000034167	GATB	98	68.966	Xenopus_tropicalis
ENSCSEG00000004009	gatb	100	78.261	ENSXMAG00000008071	gatb	100	77.184	Xiphophorus_maculatus