EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000004164 (Gene tree)
Gene ID: -
Gene Symbol: lsm8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1253 bases
Position: chr8:16887877-16889129
Accession: 103382508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000006423	LSM	PF01423.22	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000006496	-	276	XM_008315328	ENSCSEP00000006423	91 (aa)	XP_008313550	-

Gene Model

Click here to download ENSCSEG00000004164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004164	lsm8	100	81.250	ENSG00000128534	LSM8	96	95.833	Homo_sapiens
ENSCSEG00000004164	lsm8	100	85.417	ENSAPOG00000008649	lsm8	100	85.417	Acanthochromis_polyacanthus
ENSCSEG00000004164	lsm8	100	81.250	ENSAMEG00000001162	LSM8	100	81.250	Ailuropoda_melanoleuca
ENSCSEG00000004164	lsm8	79	98.611	ENSACIG00000014694	lsm8	96	98.611	Amphilophus_citrinellus
ENSCSEG00000004164	lsm8	100	85.417	ENSAOCG00000013926	lsm8	100	85.417	Amphiprion_ocellaris
ENSCSEG00000004164	lsm8	100	85.417	ENSAPEG00000023502	lsm8	100	85.417	Amphiprion_percula
ENSCSEG00000004164	lsm8	79	98.611	ENSATEG00000023432	lsm8	96	98.611	Anabas_testudineus
ENSCSEG00000004164	lsm8	79	97.222	ENSAPLG00000005115	LSM8	73	97.222	Anas_platyrhynchos
ENSCSEG00000004164	lsm8	100	81.250	ENSANAG00000027771	LSM8	97	95.833	Aotus_nancymaae
ENSCSEG00000004164	lsm8	100	85.417	ENSACLG00000011253	lsm8	100	85.417	Astatotilapia_calliptera
ENSCSEG00000004164	lsm8	100	85.417	ENSAMXG00000042902	lsm8	100	85.417	Astyanax_mexicanus
ENSCSEG00000004164	lsm8	100	81.250	ENSBTAG00000012649	LSM8	100	81.250	Bos_taurus
ENSCSEG00000004164	lsm8	98	47.872	WBGene00003082	lsm-8	96	47.872	Caenorhabditis_elegans
ENSCSEG00000004164	lsm8	100	81.250	ENSCJAG00000046406	LSM8	97	95.833	Callithrix_jacchus
ENSCSEG00000004164	lsm8	98	81.915	ENSCAFG00000016459	LSM8	95	81.915	Canis_familiaris
ENSCSEG00000004164	lsm8	100	81.250	ENSCAFG00020007643	-	100	81.250	Canis_lupus_dingo
ENSCSEG00000004164	lsm8	88	78.824	ENSCAFG00020012800	-	66	78.824	Canis_lupus_dingo
ENSCSEG00000004164	lsm8	79	95.833	ENSCHIG00000014201	LSM8	77	95.833	Capra_hircus
ENSCSEG00000004164	lsm8	100	81.250	ENSTSYG00000032434	LSM8	100	81.250	Carlito_syrichta
ENSCSEG00000004164	lsm8	79	95.833	ENSCAPG00000008253	LSM8	97	95.833	Cavia_aperea
ENSCSEG00000004164	lsm8	100	81.250	ENSCPOG00000035673	LSM8	100	81.250	Cavia_porcellus
ENSCSEG00000004164	lsm8	100	81.250	ENSCCAG00000021329	LSM8	97	95.833	Cebus_capucinus
ENSCSEG00000004164	lsm8	100	81.250	ENSCATG00000045302	LSM8	97	95.833	Cercocebus_atys
ENSCSEG00000004164	lsm8	100	81.250	ENSCLAG00000003726	LSM8	100	81.250	Chinchilla_lanigera
ENSCSEG00000004164	lsm8	100	81.250	ENSCSAG00000010802	-	100	81.250	Chlorocebus_sabaeus
ENSCSEG00000004164	lsm8	100	78.125	ENSCSAG00000019007	-	100	78.125	Chlorocebus_sabaeus
ENSCSEG00000004164	lsm8	79	95.833	ENSCPBG00000008154	LSM8	73	95.833	Chrysemys_picta_bellii
ENSCSEG00000004164	lsm8	100	65.625	ENSCING00000024877	-	100	65.625	Ciona_intestinalis
ENSCSEG00000004164	lsm8	100	81.250	ENSCANG00000040728	LSM8	97	95.833	Colobus_angolensis_palliatus
ENSCSEG00000004164	lsm8	100	81.250	ENSCGRG00001000450	Lsm8	100	81.250	Cricetulus_griseus_chok1gshd
ENSCSEG00000004164	lsm8	79	95.833	ENSCGRG00000005587	Lsm8	85	95.833	Cricetulus_griseus_crigri
ENSCSEG00000004164	lsm8	100	84.375	ENSCVAG00000020547	lsm8	100	84.375	Cyprinodon_variegatus
ENSCSEG00000004164	lsm8	100	82.292	ENSDARG00000091656	lsm8	100	82.292	Danio_rerio
ENSCSEG00000004164	lsm8	100	81.250	ENSDNOG00000034613	LSM8	100	81.250	Dasypus_novemcinctus
ENSCSEG00000004164	lsm8	100	81.250	ENSDORG00000027868	Lsm8	100	81.250	Dipodomys_ordii
ENSCSEG00000004164	lsm8	98	64.894	FBgn0035271	CG2021	99	64.894	Drosophila_melanogaster
ENSCSEG00000004164	lsm8	100	82.292	ENSETEG00000011594	LSM8	100	82.292	Echinops_telfairi
ENSCSEG00000004164	lsm8	79	94.444	ENSEBUG00000012017	lsm8	97	94.444	Eptatretus_burgeri
ENSCSEG00000004164	lsm8	100	81.250	ENSEASG00005008932	LSM8	62	81.250	Equus_asinus_asinus
ENSCSEG00000004164	lsm8	79	95.833	ENSECAG00000024025	LSM8	71	95.833	Equus_caballus
ENSCSEG00000004164	lsm8	100	84.375	ENSELUG00000010138	lsm8	100	84.375	Esox_lucius
ENSCSEG00000004164	lsm8	100	81.250	ENSFCAG00000036620	-	100	81.250	Felis_catus
ENSCSEG00000004164	lsm8	85	59.756	ENSFCAG00000044794	-	83	59.756	Felis_catus
ENSCSEG00000004164	lsm8	100	82.292	ENSFALG00000010023	LSM8	100	82.292	Ficedula_albicollis
ENSCSEG00000004164	lsm8	100	81.250	ENSFDAG00000019530	LSM8	100	81.250	Fukomys_damarensis
ENSCSEG00000004164	lsm8	100	85.417	ENSFHEG00000013729	lsm8	100	85.417	Fundulus_heteroclitus
ENSCSEG00000004164	lsm8	100	82.292	ENSGALG00000009110	LSM8	100	82.292	Gallus_gallus
ENSCSEG00000004164	lsm8	100	84.375	ENSGAFG00000001135	lsm8	100	84.375	Gambusia_affinis
ENSCSEG00000004164	lsm8	100	81.250	ENSGAGG00000017366	LSM8	100	81.250	Gopherus_agassizii
ENSCSEG00000004164	lsm8	100	81.250	ENSGGOG00000041883	LSM8	100	81.250	Gorilla_gorilla
ENSCSEG00000004164	lsm8	100	85.417	ENSHBUG00000003646	lsm8	100	85.417	Haplochromis_burtoni
ENSCSEG00000004164	lsm8	69	77.941	ENSHGLG00000001988	-	99	77.941	Heterocephalus_glaber_female
ENSCSEG00000004164	lsm8	100	76.042	ENSHGLG00000019782	-	100	76.042	Heterocephalus_glaber_female
ENSCSEG00000004164	lsm8	98	79.787	ENSHGLG00100003934	-	94	79.787	Heterocephalus_glaber_male
ENSCSEG00000004164	lsm8	100	77.083	ENSHGLG00100012166	-	100	77.083	Heterocephalus_glaber_male
ENSCSEG00000004164	lsm8	100	84.375	ENSHCOG00000005037	lsm8	100	84.375	Hippocampus_comes
ENSCSEG00000004164	lsm8	100	85.417	ENSIPUG00000019811	NAA38	100	85.417	Ictalurus_punctatus
ENSCSEG00000004164	lsm8	79	81.944	ENSSTOG00000034801	-	67	81.944	Ictidomys_tridecemlineatus
ENSCSEG00000004164	lsm8	100	81.250	ENSSTOG00000009039	LSM8	100	81.250	Ictidomys_tridecemlineatus
ENSCSEG00000004164	lsm8	100	81.250	ENSJJAG00000009031	Lsm8	99	81.250	Jaculus_jaculus
ENSCSEG00000004164	lsm8	100	85.417	ENSKMAG00000018983	lsm8	100	85.417	Kryptolebias_marmoratus
ENSCSEG00000004164	lsm8	100	80.208	ENSLACG00000010231	LSM8	100	80.208	Latimeria_chalumnae
ENSCSEG00000004164	lsm8	100	84.375	ENSLOCG00000015580	lsm8	100	84.375	Lepisosteus_oculatus
ENSCSEG00000004164	lsm8	100	79.381	ENSLAFG00000011242	LSM8	100	79.381	Loxodonta_africana
ENSCSEG00000004164	lsm8	100	81.250	ENSMFAG00000035798	LSM8	97	95.833	Macaca_fascicularis
ENSCSEG00000004164	lsm8	100	78.125	ENSMFAG00000013044	-	100	78.125	Macaca_fascicularis
ENSCSEG00000004164	lsm8	100	81.250	ENSMMUG00000046401	LSM8	97	95.833	Macaca_mulatta
ENSCSEG00000004164	lsm8	100	81.250	ENSMNEG00000036764	-	97	95.833	Macaca_nemestrina
ENSCSEG00000004164	lsm8	79	93.056	ENSMNEG00000011141	-	96	93.056	Macaca_nemestrina
ENSCSEG00000004164	lsm8	100	68.750	ENSMLEG00000039324	-	100	68.750	Mandrillus_leucophaeus
ENSCSEG00000004164	lsm8	100	81.250	ENSMLEG00000035828	-	97	95.833	Mandrillus_leucophaeus
ENSCSEG00000004164	lsm8	79	98.611	ENSMAMG00000018839	lsm8	96	98.611	Mastacembelus_armatus
ENSCSEG00000004164	lsm8	100	85.417	ENSMZEG00005019138	lsm8	100	85.417	Maylandia_zebra
ENSCSEG00000004164	lsm8	100	82.292	ENSMGAG00000008808	LSM8	100	82.292	Meleagris_gallopavo
ENSCSEG00000004164	lsm8	100	75.000	ENSMAUG00000015721	-	100	75.000	Mesocricetus_auratus
ENSCSEG00000004164	lsm8	87	86.076	ENSMAUG00000020287	-	97	88.889	Mesocricetus_auratus
ENSCSEG00000004164	lsm8	100	64.583	ENSMAUG00000015356	-	100	64.583	Mesocricetus_auratus
ENSCSEG00000004164	lsm8	100	81.250	ENSMICG00000042730	LSM8	100	81.250	Microcebus_murinus
ENSCSEG00000004164	lsm8	100	81.250	ENSMOCG00000001688	Lsm8	100	81.250	Microtus_ochrogaster
ENSCSEG00000004164	lsm8	79	98.611	ENSMMOG00000006046	lsm8	96	98.611	Mola_mola
ENSCSEG00000004164	lsm8	77	83.333	ENSMODG00000015729	LSM8	92	83.333	Monodelphis_domestica
ENSCSEG00000004164	lsm8	100	86.458	ENSMALG00000000405	lsm8	100	86.458	Monopterus_albus
ENSCSEG00000004164	lsm8	100	81.250	MGP_CAROLIEiJ_G0028125	-	100	81.250	Mus_caroli
ENSCSEG00000004164	lsm8	100	81.250	ENSMUSG00000044155	Lsm8	100	81.250	Mus_musculus
ENSCSEG00000004164	lsm8	100	81.250	MGP_PahariEiJ_G0021881	Lsm8	96	95.833	Mus_pahari
ENSCSEG00000004164	lsm8	100	81.250	MGP_SPRETEiJ_G0029125	-	100	81.250	Mus_spretus
ENSCSEG00000004164	lsm8	100	80.208	ENSMLUG00000027762	-	100	80.208	Myotis_lucifugus
ENSCSEG00000004164	lsm8	100	81.250	ENSMLUG00000006837	-	100	81.250	Myotis_lucifugus
ENSCSEG00000004164	lsm8	100	81.250	ENSNGAG00000016554	Lsm8	100	81.250	Nannospalax_galili
ENSCSEG00000004164	lsm8	100	85.417	ENSNBRG00000014441	lsm8	100	85.417	Neolamprologus_brichardi
ENSCSEG00000004164	lsm8	100	81.250	ENSNLEG00000011768	LSM8	100	81.250	Nomascus_leucogenys
ENSCSEG00000004164	lsm8	100	71.875	ENSMEUG00000007801	LSM8	100	71.875	Notamacropus_eugenii
ENSCSEG00000004164	lsm8	79	95.833	ENSOPRG00000014809	LSM8	85	95.833	Ochotona_princeps
ENSCSEG00000004164	lsm8	89	63.953	ENSODEG00000020290	-	100	63.953	Octodon_degus
ENSCSEG00000004164	lsm8	100	81.250	ENSODEG00000000418	-	100	81.250	Octodon_degus
ENSCSEG00000004164	lsm8	100	80.208	ENSOANG00000014536	LSM8	100	80.208	Ornithorhynchus_anatinus
ENSCSEG00000004164	lsm8	100	79.381	ENSOCUG00000017359	LSM8	100	79.381	Oryctolagus_cuniculus
ENSCSEG00000004164	lsm8	100	88.298	ENSORLG00000017432	lsm8	100	88.298	Oryzias_latipes
ENSCSEG00000004164	lsm8	100	88.298	ENSORLG00020004376	lsm8	100	88.298	Oryzias_latipes_hni
ENSCSEG00000004164	lsm8	100	88.542	ENSORLG00015003757	lsm8	100	88.542	Oryzias_latipes_hsok
ENSCSEG00000004164	lsm8	100	92.308	ENSOMEG00000022509	lsm8	100	93.407	Oryzias_melastigma
ENSCSEG00000004164	lsm8	100	81.250	ENSOGAG00000013377	LSM8	100	81.250	Otolemur_garnettii
ENSCSEG00000004164	lsm8	100	81.250	ENSOARG00000017974	LSM8	100	81.250	Ovis_aries
ENSCSEG00000004164	lsm8	79	95.833	ENSPPAG00000043228	-	96	95.833	Pan_paniscus
ENSCSEG00000004164	lsm8	100	81.250	ENSPPRG00000006444	LSM8	100	81.250	Panthera_pardus
ENSCSEG00000004164	lsm8	100	81.250	ENSPTIG00000004722	LSM8	100	81.250	Panthera_tigris_altaica
ENSCSEG00000004164	lsm8	79	95.833	ENSPTRG00000046596	-	96	95.833	Pan_troglodytes
ENSCSEG00000004164	lsm8	100	81.250	ENSPANG00000035470	-	97	95.833	Papio_anubis
ENSCSEG00000004164	lsm8	100	76.042	ENSPANG00000019395	-	100	76.042	Papio_anubis
ENSCSEG00000004164	lsm8	79	95.833	ENSPKIG00000006092	lsm8	73	95.833	Paramormyrops_kingsleyae
ENSCSEG00000004164	lsm8	79	95.833	ENSPSIG00000017054	LSM8	96	95.833	Pelodiscus_sinensis
ENSCSEG00000004164	lsm8	79	98.611	ENSPMGG00000016442	lsm8	96	98.611	Periophthalmus_magnuspinnatus
ENSCSEG00000004164	lsm8	79	95.833	ENSPEMG00000009153	Lsm8	97	95.833	Peromyscus_maniculatus_bairdii
ENSCSEG00000004164	lsm8	97	81.720	ENSPCIG00000021467	LSM8	98	81.720	Phascolarctos_cinereus
ENSCSEG00000004164	lsm8	100	84.375	ENSPFOG00000012340	lsm8	100	84.375	Poecilia_formosa
ENSCSEG00000004164	lsm8	79	97.222	ENSPLAG00000000516	lsm8	75	97.222	Poecilia_latipinna
ENSCSEG00000004164	lsm8	100	84.375	ENSPMEG00000022567	lsm8	100	84.375	Poecilia_mexicana
ENSCSEG00000004164	lsm8	79	87.342	ENSPREG00000005527	lsm8	71	87.342	Poecilia_reticulata
ENSCSEG00000004164	lsm8	100	81.250	ENSPPYG00000017942	LSM8	100	81.250	Pongo_abelii
ENSCSEG00000004164	lsm8	99	61.053	ENSPCOG00000017982	-	99	61.053	Propithecus_coquereli
ENSCSEG00000004164	lsm8	100	81.250	ENSPCOG00000003309	-	100	81.250	Propithecus_coquereli
ENSCSEG00000004164	lsm8	79	94.444	ENSPVAG00000000990	LSM8	85	94.444	Pteropus_vampyrus
ENSCSEG00000004164	lsm8	100	85.417	ENSPNYG00000011448	lsm8	100	85.417	Pundamilia_nyererei
ENSCSEG00000004164	lsm8	100	85.417	ENSPNAG00000010252	lsm8	100	85.417	Pygocentrus_nattereri
ENSCSEG00000004164	lsm8	100	81.250	ENSRNOG00000058677	Lsm8	100	81.250	Rattus_norvegicus
ENSCSEG00000004164	lsm8	100	81.250	ENSRBIG00000032851	LSM8	97	95.833	Rhinopithecus_bieti
ENSCSEG00000004164	lsm8	100	81.250	ENSRROG00000039618	LSM8	97	95.833	Rhinopithecus_roxellana
ENSCSEG00000004164	lsm8	100	81.250	ENSSBOG00000023223	LSM8	97	95.833	Saimiri_boliviensis_boliviensis
ENSCSEG00000004164	lsm8	100	81.250	ENSSHAG00000018435	-	100	81.250	Sarcophilus_harrisii
ENSCSEG00000004164	lsm8	100	82.292	ENSSFOG00015004412	lsm8	100	82.292	Scleropages_formosus
ENSCSEG00000004164	lsm8	79	98.611	ENSSMAG00000009458	lsm8	96	98.611	Scophthalmus_maximus
ENSCSEG00000004164	lsm8	100	85.417	ENSSDUG00000014702	lsm8	100	85.417	Seriola_dumerili
ENSCSEG00000004164	lsm8	79	98.611	ENSSLDG00000016870	lsm8	96	98.611	Seriola_lalandi_dorsalis
ENSCSEG00000004164	lsm8	79	95.833	ENSSARG00000009628	-	100	95.833	Sorex_araneus
ENSCSEG00000004164	lsm8	100	81.250	ENSSPUG00000017419	LSM8	100	81.250	Sphenodon_punctatus
ENSCSEG00000004164	lsm8	100	85.417	ENSSPAG00000021422	lsm8	100	85.417	Stegastes_partitus
ENSCSEG00000004164	lsm8	100	81.250	ENSSSCG00000021652	LSM8	100	81.250	Sus_scrofa
ENSCSEG00000004164	lsm8	100	81.250	ENSTGUG00000016823	-	100	81.250	Taeniopygia_guttata
ENSCSEG00000004164	lsm8	100	82.292	ENSTGUG00000004730	-	100	82.292	Taeniopygia_guttata
ENSCSEG00000004164	lsm8	100	85.417	ENSTRUG00000025192	lsm8	100	85.417	Takifugu_rubripes
ENSCSEG00000004164	lsm8	100	85.417	ENSTNIG00000002864	lsm8	100	85.417	Tetraodon_nigroviridis
ENSCSEG00000004164	lsm8	100	81.250	ENSTTRG00000001023	LSM8	100	81.250	Tursiops_truncatus
ENSCSEG00000004164	lsm8	79	95.833	ENSUAMG00000006943	-	75	95.833	Ursus_americanus
ENSCSEG00000004164	lsm8	79	95.833	ENSUMAG00000003073	LSM8	77	95.833	Ursus_maritimus
ENSCSEG00000004164	lsm8	100	81.250	ENSVPAG00000001530	LSM8	100	81.250	Vicugna_pacos
ENSCSEG00000004164	lsm8	87	89.873	ENSVVUG00000013248	-	85	89.873	Vulpes_vulpes
ENSCSEG00000004164	lsm8	92	82.022	ENSXETG00000021829	lsm8	92	82.022	Xenopus_tropicalis
ENSCSEG00000004164	lsm8	100	83.158	ENSXCOG00000012938	lsm8	100	83.158	Xiphophorus_couchianus
ENSCSEG00000004164	lsm8	100	84.375	ENSXMAG00000025919	lsm8	100	84.375	Xiphophorus_maculatus