EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000004212 (Gene tree)
Gene ID: 103380096
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 32607 bases
Position: chr6:10254717-10287323
Accession: 103380096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000006497	RRM_1	PF00076.22	4.6e-54	1	3
ENSCSEP00000006497	RRM_1	PF00076.22	4.6e-54	2	3
ENSCSEP00000006497	RRM_1	PF00076.22	4.6e-54	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000006569	-	5218	XM_008311901	ENSCSEP00000006497	748 (aa)	XP_008310123	UPI0004979AC1

Gene Model

Click here to download ENSCSEG00000004212's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004212's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004212	rbm28	100	49.301	ENSG00000106344	RBM28	100	47.549	Homo_sapiens
ENSCSEG00000004212	rbm28	59	71.946	ENSAPOG00000015512	rbm28	100	64.433	Acanthochromis_polyacanthus
ENSCSEG00000004212	rbm28	98	54.444	ENSAMEG00000004776	RBM28	90	56.410	Ailuropoda_melanoleuca
ENSCSEG00000004212	rbm28	57	70.465	ENSACIG00000023153	rbm28	91	70.465	Amphilophus_citrinellus
ENSCSEG00000004212	rbm28	59	72.483	ENSAOCG00000000462	rbm28	100	63.718	Amphiprion_ocellaris
ENSCSEG00000004212	rbm28	59	72.260	ENSAPEG00000012996	rbm28	100	64.653	Amphiprion_percula
ENSCSEG00000004212	rbm28	61	66.805	ENSATEG00000001672	rbm28	100	63.671	Anabas_testudineus
ENSCSEG00000004212	rbm28	100	49.229	ENSANAG00000033922	RBM28	100	54.545	Aotus_nancymaae
ENSCSEG00000004212	rbm28	100	63.589	ENSACLG00000025024	rbm28	100	64.005	Astatotilapia_calliptera
ENSCSEG00000004212	rbm28	59	59.465	ENSAMXG00000000763	rbm28	99	59.911	Astyanax_mexicanus
ENSCSEG00000004212	rbm28	76	54.545	ENSBTAG00000017001	RBM28	100	54.545	Bos_taurus
ENSCSEG00000004212	rbm28	100	48.346	ENSCJAG00000017731	RBM28	100	54.545	Callithrix_jacchus
ENSCSEG00000004212	rbm28	100	49.298	ENSCAFG00000001667	RBM28	100	49.042	Canis_familiaris
ENSCSEG00000004212	rbm28	100	49.298	ENSCAFG00020021648	RBM28	100	49.042	Canis_lupus_dingo
ENSCSEG00000004212	rbm28	100	47.940	ENSCHIG00000014146	RBM28	100	48.928	Capra_hircus
ENSCSEG00000004212	rbm28	72	53.556	ENSTSYG00000002892	RBM28	100	52.273	Carlito_syrichta
ENSCSEG00000004212	rbm28	82	40.605	ENSCAPG00000013218	RBM28	96	41.452	Cavia_aperea
ENSCSEG00000004212	rbm28	65	53.239	ENSCPOG00000006253	RBM28	100	50.569	Cavia_porcellus
ENSCSEG00000004212	rbm28	83	54.545	ENSCCAG00000035105	RBM28	100	54.545	Cebus_capucinus
ENSCSEG00000004212	rbm28	100	49.872	ENSCATG00000040497	RBM28	100	54.545	Cercocebus_atys
ENSCSEG00000004212	rbm28	64	53.086	ENSCLAG00000003707	RBM28	100	48.214	Chinchilla_lanigera
ENSCSEG00000004212	rbm28	100	49.616	ENSCSAG00000010161	RBM28	100	48.912	Chlorocebus_sabaeus
ENSCSEG00000004212	rbm28	57	53.226	ENSCHOG00000001994	-	63	53.226	Choloepus_hoffmanni
ENSCSEG00000004212	rbm28	56	48.602	ENSCPBG00000018088	RBM28	77	50.000	Chrysemys_picta_bellii
ENSCSEG00000004212	rbm28	93	39.073	ENSCING00000009238	-	83	38.685	Ciona_intestinalis
ENSCSEG00000004212	rbm28	90	50.829	ENSCANG00000038397	RBM28	74	62.559	Colobus_angolensis_palliatus
ENSCSEG00000004212	rbm28	66	52.305	ENSCGRG00001021278	Rbm28	83	59.330	Cricetulus_griseus_chok1gshd
ENSCSEG00000004212	rbm28	66	52.305	ENSCGRG00000005098	Rbm28	58	54.305	Cricetulus_griseus_crigri
ENSCSEG00000004212	rbm28	60	72.406	ENSCVAG00000010493	rbm28	99	62.387	Cyprinodon_variegatus
ENSCSEG00000004212	rbm28	87	60.044	ENSDARG00000025332	rbm28	100	52.074	Danio_rerio
ENSCSEG00000004212	rbm28	100	49.424	ENSDNOG00000001124	RBM28	100	49.617	Dasypus_novemcinctus
ENSCSEG00000004212	rbm28	77	51.389	ENSDORG00000004184	Rbm28	86	53.965	Dipodomys_ordii
ENSCSEG00000004212	rbm28	67	36.884	FBgn0260456	CG4806	66	33.839	Drosophila_melanogaster
ENSCSEG00000004212	rbm28	57	48.718	ENSETEG00000007130	RBM28	56	48.718	Echinops_telfairi
ENSCSEG00000004212	rbm28	99	38.360	ENSEBUG00000004419	rbm28	98	39.037	Eptatretus_burgeri
ENSCSEG00000004212	rbm28	100	45.870	ENSEEUG00000002389	RBM28	100	46.134	Erinaceus_europaeus
ENSCSEG00000004212	rbm28	100	57.197	ENSELUG00000020602	rbm28	100	57.035	Esox_lucius
ENSCSEG00000004212	rbm28	100	50.392	ENSFCAG00000000946	RBM28	100	54.545	Felis_catus
ENSCSEG00000004212	rbm28	100	50.515	ENSFDAG00000010169	RBM28	100	51.220	Fukomys_damarensis
ENSCSEG00000004212	rbm28	89	62.212	ENSGMOG00000007091	rbm28	100	57.258	Gadus_morhua
ENSCSEG00000004212	rbm28	60	68.212	ENSGAFG00000004802	rbm28	98	68.212	Gambusia_affinis
ENSCSEG00000004212	rbm28	59	70.946	ENSGACG00000012612	rbm28	100	62.566	Gasterosteus_aculeatus
ENSCSEG00000004212	rbm28	84	56.098	ENSGAGG00000008873	RBM28	88	56.098	Gopherus_agassizii
ENSCSEG00000004212	rbm28	95	48.461	ENSGGOG00000004644	RBM28	97	48.794	Gorilla_gorilla
ENSCSEG00000004212	rbm28	94	63.939	ENSHBUG00000009611	rbm28	98	63.889	Haplochromis_burtoni
ENSCSEG00000004212	rbm28	100	50.970	ENSHGLG00000005409	RBM28	100	50.385	Heterocephalus_glaber_female
ENSCSEG00000004212	rbm28	100	50.970	ENSHGLG00100016458	RBM28	100	50.385	Heterocephalus_glaber_male
ENSCSEG00000004212	rbm28	83	55.705	ENSHCOG00000010597	rbm28	99	47.798	Hippocampus_comes
ENSCSEG00000004212	rbm28	58	50.346	ENSIPUG00000007103	rbm28	81	50.346	Ictalurus_punctatus
ENSCSEG00000004212	rbm28	100	49.049	ENSSTOG00000002169	RBM28	100	49.357	Ictidomys_tridecemlineatus
ENSCSEG00000004212	rbm28	100	46.429	ENSJJAG00000022400	Rbm28	100	46.461	Jaculus_jaculus
ENSCSEG00000004212	rbm28	60	70.667	ENSKMAG00000013348	rbm28	99	63.289	Kryptolebias_marmoratus
ENSCSEG00000004212	rbm28	60	68.653	ENSLBEG00000012998	rbm28	100	63.822	Labrus_bergylta
ENSCSEG00000004212	rbm28	100	57.212	ENSLOCG00000015541	rbm28	100	57.212	Lepisosteus_oculatus
ENSCSEG00000004212	rbm28	100	48.980	ENSLAFG00000010717	RBM28	100	48.143	Loxodonta_africana
ENSCSEG00000004212	rbm28	100	49.490	ENSMFAG00000031036	RBM28	100	54.545	Macaca_fascicularis
ENSCSEG00000004212	rbm28	73	54.545	ENSMMUG00000007250	RBM28	100	54.545	Macaca_mulatta
ENSCSEG00000004212	rbm28	100	49.806	ENSMNEG00000036970	RBM28	100	54.545	Macaca_nemestrina
ENSCSEG00000004212	rbm28	81	50.734	ENSMLEG00000037717	RBM28	99	49.686	Mandrillus_leucophaeus
ENSCSEG00000004212	rbm28	100	66.184	ENSMAMG00000008525	rbm28	100	66.184	Mastacembelus_armatus
ENSCSEG00000004212	rbm28	93	63.483	ENSMZEG00005019625	rbm28	100	63.854	Maylandia_zebra
ENSCSEG00000004212	rbm28	66	52.033	ENSMAUG00000002263	Rbm28	100	49.242	Mesocricetus_auratus
ENSCSEG00000004212	rbm28	100	50.128	ENSMOCG00000014615	Rbm28	100	50.064	Microtus_ochrogaster
ENSCSEG00000004212	rbm28	60	64.365	ENSMMOG00000008600	rbm28	91	64.365	Mola_mola
ENSCSEG00000004212	rbm28	100	47.959	ENSMODG00000015151	RBM28	100	48.917	Monodelphis_domestica
ENSCSEG00000004212	rbm28	100	64.736	ENSMALG00000006419	rbm28	100	64.607	Monopterus_albus
ENSCSEG00000004212	rbm28	100	50.897	MGP_CAROLIEiJ_G0028162	Rbm28	100	50.708	Mus_caroli
ENSCSEG00000004212	rbm28	100	50.706	ENSMUSG00000029701	Rbm28	100	50.771	Mus_musculus
ENSCSEG00000004212	rbm28	100	49.935	MGP_PahariEiJ_G0021920	Rbm28	100	50.000	Mus_pahari
ENSCSEG00000004212	rbm28	100	50.517	MGP_SPRETEiJ_G0029162	Rbm28	100	50.582	Mus_spretus
ENSCSEG00000004212	rbm28	100	49.618	ENSMPUG00000006511	RBM28	100	49.357	Mustela_putorius_furo
ENSCSEG00000004212	rbm28	100	49.239	ENSMLUG00000002186	RBM28	100	50.773	Myotis_lucifugus
ENSCSEG00000004212	rbm28	100	50.854	ENSNGAG00000006480	-	100	51.643	Nannospalax_galili
ENSCSEG00000004212	rbm28	100	49.935	ENSNGAG00000017946	-	100	48.571	Nannospalax_galili
ENSCSEG00000004212	rbm28	100	48.228	ENSNLEG00000012307	RBM28	100	54.545	Nomascus_leucogenys
ENSCSEG00000004212	rbm28	83	61.250	ENSMEUG00000009611	RBM28	83	61.635	Notamacropus_eugenii
ENSCSEG00000004212	rbm28	84	49.421	ENSOPRG00000015140	RBM28	85	50.095	Ochotona_princeps
ENSCSEG00000004212	rbm28	100	47.733	ENSODEG00000003213	-	100	48.205	Octodon_degus
ENSCSEG00000004212	rbm28	90	46.454	ENSODEG00000013217	-	99	45.874	Octodon_degus
ENSCSEG00000004212	rbm28	60	72.687	ENSONIG00000014924	rbm28	100	64.450	Oreochromis_niloticus
ENSCSEG00000004212	rbm28	62	47.046	ENSOANG00000000815	-	59	47.588	Ornithorhynchus_anatinus
ENSCSEG00000004212	rbm28	100	49.189	ENSOCUG00000003009	RBM28	100	49.299	Oryctolagus_cuniculus
ENSCSEG00000004212	rbm28	99	61.658	ENSORLG00000009636	rbm28	99	62.663	Oryzias_latipes
ENSCSEG00000004212	rbm28	83	69.163	ENSORLG00020002123	rbm28	99	62.533	Oryzias_latipes_hni
ENSCSEG00000004212	rbm28	87	67.633	ENSORLG00015015030	rbm28	98	68.599	Oryzias_latipes_hsok
ENSCSEG00000004212	rbm28	60	70.705	ENSOMEG00000007801	rbm28	100	62.663	Oryzias_melastigma
ENSCSEG00000004212	rbm28	84	52.273	ENSOGAG00000006011	RBM28	77	54.120	Otolemur_garnettii
ENSCSEG00000004212	rbm28	100	48.611	ENSOARG00000002547	RBM28	100	49.105	Ovis_aries
ENSCSEG00000004212	rbm28	100	49.491	ENSPPAG00000041730	RBM28	100	48.917	Pan_paniscus
ENSCSEG00000004212	rbm28	100	50.522	ENSPPRG00000004420	RBM28	100	54.545	Panthera_pardus
ENSCSEG00000004212	rbm28	100	49.936	ENSPTIG00000008550	RBM28	100	54.545	Panthera_tigris_altaica
ENSCSEG00000004212	rbm28	100	49.303	ENSPTRG00000019659	RBM28	100	48.731	Pan_troglodytes
ENSCSEG00000004212	rbm28	100	49.682	ENSPANG00000022295	RBM28	100	54.545	Papio_anubis
ENSCSEG00000004212	rbm28	99	54.501	ENSPKIG00000023453	rbm28	99	54.151	Paramormyrops_kingsleyae
ENSCSEG00000004212	rbm28	83	66.667	ENSPMGG00000012840	rbm28	95	63.741	Periophthalmus_magnuspinnatus
ENSCSEG00000004212	rbm28	100	49.025	ENSPEMG00000020673	Rbm28	100	48.656	Peromyscus_maniculatus_bairdii
ENSCSEG00000004212	rbm28	100	49.215	ENSPCIG00000012810	RBM28	100	47.943	Phascolarctos_cinereus
ENSCSEG00000004212	rbm28	60	69.095	ENSPFOG00000018209	rbm28	100	60.414	Poecilia_formosa
ENSCSEG00000004212	rbm28	58	70.023	ENSPLAG00000016078	rbm28	95	61.691	Poecilia_latipinna
ENSCSEG00000004212	rbm28	60	68.874	ENSPMEG00000004292	rbm28	100	60.285	Poecilia_mexicana
ENSCSEG00000004212	rbm28	59	68.468	ENSPREG00000014287	rbm28	99	59.921	Poecilia_reticulata
ENSCSEG00000004212	rbm28	100	49.299	ENSPPYG00000017975	RBM28	100	49.362	Pongo_abelii
ENSCSEG00000004212	rbm28	73	51.099	ENSPCAG00000008223	RBM28	82	50.670	Procavia_capensis
ENSCSEG00000004212	rbm28	83	54.545	ENSPCOG00000016797	RBM28	100	44.360	Propithecus_coquereli
ENSCSEG00000004212	rbm28	72	60.550	ENSPVAG00000005443	RBM28	68	64.583	Pteropus_vampyrus
ENSCSEG00000004212	rbm28	100	63.922	ENSPNYG00000014003	rbm28	100	63.743	Pundamilia_nyererei
ENSCSEG00000004212	rbm28	100	49.487	ENSRNOG00000005468	Rbm28	100	49.170	Rattus_norvegicus
ENSCSEG00000004212	rbm28	100	49.555	ENSRBIG00000033990	RBM28	100	54.545	Rhinopithecus_bieti
ENSCSEG00000004212	rbm28	100	49.746	ENSRROG00000040747	RBM28	100	54.545	Rhinopithecus_roxellana
ENSCSEG00000004212	rbm28	91	44.473	ENSSBOG00000012308	RBM28	100	45.812	Saimiri_boliviensis_boliviensis
ENSCSEG00000004212	rbm28	96	47.737	ENSSHAG00000017017	RBM28	98	47.586	Sarcophilus_harrisii
ENSCSEG00000004212	rbm28	100	53.642	ENSSFOG00015001231	rbm28	100	54.172	Scleropages_formosus
ENSCSEG00000004212	rbm28	61	66.594	ENSSMAG00000003885	rbm28	90	66.374	Scophthalmus_maximus
ENSCSEG00000004212	rbm28	61	76.432	ENSSDUG00000014270	rbm28	88	76.380	Seriola_dumerili
ENSCSEG00000004212	rbm28	100	67.784	ENSSLDG00000020099	rbm28	100	68.299	Seriola_lalandi_dorsalis
ENSCSEG00000004212	rbm28	75	57.216	ENSSARG00000008303	RBM28	78	57.071	Sorex_araneus
ENSCSEG00000004212	rbm28	68	63.235	ENSSPUG00000000838	RBM28	78	63.235	Sphenodon_punctatus
ENSCSEG00000004212	rbm28	59	72.135	ENSSPAG00000023305	rbm28	100	64.754	Stegastes_partitus
ENSCSEG00000004212	rbm28	100	49.553	ENSSSCG00000031847	RBM28	100	49.047	Sus_scrofa
ENSCSEG00000004212	rbm28	61	65.011	ENSTRUG00000013311	rbm28	99	58.599	Takifugu_rubripes
ENSCSEG00000004212	rbm28	99	58.269	ENSTNIG00000017962	rbm28	99	57.052	Tetraodon_nigroviridis
ENSCSEG00000004212	rbm28	81	56.075	ENSTBEG00000012749	RBM28	71	53.977	Tupaia_belangeri
ENSCSEG00000004212	rbm28	88	61.026	ENSTTRG00000013647	RBM28	100	49.170	Tursiops_truncatus
ENSCSEG00000004212	rbm28	100	46.633	ENSUAMG00000006949	RBM28	100	47.172	Ursus_americanus
ENSCSEG00000004212	rbm28	100	49.746	ENSUMAG00000005997	RBM28	100	49.743	Ursus_maritimus
ENSCSEG00000004212	rbm28	86	45.549	ENSVPAG00000008304	RBM28	87	44.122	Vicugna_pacos
ENSCSEG00000004212	rbm28	100	50.000	ENSVVUG00000007270	RBM28	100	49.870	Vulpes_vulpes
ENSCSEG00000004212	rbm28	99	47.583	ENSXETG00000009271	rbm28	60	48.898	Xenopus_tropicalis
ENSCSEG00000004212	rbm28	61	63.656	ENSXCOG00000020357	rbm28	92	63.496	Xiphophorus_couchianus
ENSCSEG00000004212	rbm28	60	68.009	ENSXMAG00000004415	rbm28	99	60.630	Xiphophorus_maculatus