EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000004238 (Gene tree)
Gene ID: 103391695
Gene Symbol: mrpl30
Alias: zgc:112089
Full Name: mitochondrial ribosomal protein L30
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 7078 bases
Position: chr16:3191556-3198633
Accession: 103391695
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000006540	Ribosomal_L30	PF00327.20	4e-15	1	1
ENSCSEP00000006538	Ribosomal_L30	PF00327.20	4.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000006612	-	671	-	ENSCSEP00000006540	150 (aa)	-	-
ENSCSET00000006610	-	5926	XM_008328064	ENSCSEP00000006538	159 (aa)	XP_008326286	UPI000496593C

Gene Model

Click here to download ENSCSEG00000004238's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004238	mrpl30	100	68.750	ENSAPOG00000005884	mrpl30	100	68.750	Acanthochromis_polyacanthus
ENSCSEG00000004238	mrpl30	100	68.125	ENSACIG00000022360	mrpl30	100	68.125	Amphilophus_citrinellus
ENSCSEG00000004238	mrpl30	100	67.500	ENSAOCG00000002976	mrpl30	100	67.500	Amphiprion_ocellaris
ENSCSEG00000004238	mrpl30	100	67.500	ENSAPEG00000006678	mrpl30	100	67.500	Amphiprion_percula
ENSCSEG00000004238	mrpl30	100	73.125	ENSATEG00000008999	mrpl30	100	73.125	Anabas_testudineus
ENSCSEG00000004238	mrpl30	89	59.259	ENSACAG00000000933	-	94	59.259	Anolis_carolinensis
ENSCSEG00000004238	mrpl30	100	70.625	ENSACLG00000001506	mrpl30	100	70.625	Astatotilapia_calliptera
ENSCSEG00000004238	mrpl30	96	61.111	ENSAMXG00000005341	mrpl30	90	60.959	Astyanax_mexicanus
ENSCSEG00000004238	mrpl30	83	54.400	ENSCAFG00000008574	-	78	53.968	Canis_familiaris
ENSCSEG00000004238	mrpl30	73	66.364	ENSTSYG00000030746	-	81	66.364	Carlito_syrichta
ENSCSEG00000004238	mrpl30	65	47.273	ENSCPBG00000013807	-	97	47.273	Chrysemys_picta_bellii
ENSCSEG00000004238	mrpl30	100	67.500	ENSCVAG00000018330	mrpl30	100	67.500	Cyprinodon_variegatus
ENSCSEG00000004238	mrpl30	100	58.491	ENSDARG00000069850	mrpl30	100	58.491	Danio_rerio
ENSCSEG00000004238	mrpl30	93	50.345	ENSEBUG00000013592	mrpl30	86	56.780	Eptatretus_burgeri
ENSCSEG00000004238	mrpl30	91	68.613	ENSELUG00000020222	mrpl30	87	68.613	Esox_lucius
ENSCSEG00000004238	mrpl30	92	54.348	ENSFALG00000003937	-	88	53.147	Ficedula_albicollis
ENSCSEG00000004238	mrpl30	97	67.742	ENSFHEG00000012666	mrpl30	82	67.742	Fundulus_heteroclitus
ENSCSEG00000004238	mrpl30	91	59.124	ENSGALG00000016760	-	84	59.124	Gallus_gallus
ENSCSEG00000004238	mrpl30	100	66.875	ENSGAFG00000021234	mrpl30	100	66.875	Gambusia_affinis
ENSCSEG00000004238	mrpl30	100	70.625	ENSHBUG00000005392	mrpl30	100	70.625	Haplochromis_burtoni
ENSCSEG00000004238	mrpl30	84	56.349	ENSHGLG00000019740	-	86	56.349	Heterocephalus_glaber_female
ENSCSEG00000004238	mrpl30	84	56.349	ENSHGLG00100019694	-	86	56.349	Heterocephalus_glaber_male
ENSCSEG00000004238	mrpl30	99	62.420	ENSHCOG00000003687	mrpl30	96	62.420	Hippocampus_comes
ENSCSEG00000004238	mrpl30	100	57.764	ENSIPUG00000004313	mrpl30	100	57.764	Ictalurus_punctatus
ENSCSEG00000004238	mrpl30	73	62.727	ENSSTOG00000033815	-	83	62.727	Ictidomys_tridecemlineatus
ENSCSEG00000004238	mrpl30	100	68.125	ENSKMAG00000001499	mrpl30	100	68.125	Kryptolebias_marmoratus
ENSCSEG00000004238	mrpl30	97	73.973	ENSLBEG00000018368	mrpl30	100	70.625	Labrus_bergylta
ENSCSEG00000004238	mrpl30	76	79.825	ENSLBEG00000027390	-	82	79.825	Labrus_bergylta
ENSCSEG00000004238	mrpl30	98	50.318	ENSLACG00000012777	mrpl30	96	50.318	Latimeria_chalumnae
ENSCSEG00000004238	mrpl30	95	61.806	ENSLOCG00000001452	mrpl30	91	61.806	Lepisosteus_oculatus
ENSCSEG00000004238	mrpl30	100	72.500	ENSMAMG00000016802	mrpl30	100	72.500	Mastacembelus_armatus
ENSCSEG00000004238	mrpl30	100	70.625	ENSMZEG00005022036	mrpl30	100	70.625	Maylandia_zebra
ENSCSEG00000004238	mrpl30	100	70.000	ENSMMOG00000019827	mrpl30	100	70.000	Mola_mola
ENSCSEG00000004238	mrpl30	97	72.603	ENSMALG00000004911	mrpl30	100	69.620	Monopterus_albus
ENSCSEG00000004238	mrpl30	100	68.750	ENSNBRG00000003924	mrpl30	100	68.750	Neolamprologus_brichardi
ENSCSEG00000004238	mrpl30	77	58.621	ENSMEUG00000010134	-	72	58.621	Notamacropus_eugenii
ENSCSEG00000004238	mrpl30	79	62.185	ENSODEG00000010546	-	90	62.185	Octodon_degus
ENSCSEG00000004238	mrpl30	100	70.000	ENSONIG00000014167	mrpl30	100	70.000	Oreochromis_niloticus
ENSCSEG00000004238	mrpl30	91	70.588	ENSORLG00000025091	mrpl30	78	69.504	Oryzias_latipes
ENSCSEG00000004238	mrpl30	91	70.588	ENSORLG00020011064	mrpl30	92	69.504	Oryzias_latipes_hni
ENSCSEG00000004238	mrpl30	91	71.324	ENSORLG00015014430	mrpl30	92	70.213	Oryzias_latipes_hsok
ENSCSEG00000004238	mrpl30	91	69.118	ENSOMEG00000011587	mrpl30	83	63.576	Oryzias_melastigma
ENSCSEG00000004238	mrpl30	90	59.259	ENSPKIG00000012379	mrpl30	85	59.259	Paramormyrops_kingsleyae
ENSCSEG00000004238	mrpl30	89	52.985	ENSPSIG00000011557	-	95	52.985	Pelodiscus_sinensis
ENSCSEG00000004238	mrpl30	97	64.474	ENSPMGG00000010475	mrpl30	100	62.733	Periophthalmus_magnuspinnatus
ENSCSEG00000004238	mrpl30	88	53.030	ENSPMAG00000004676	mrpl30	82	53.030	Petromyzon_marinus
ENSCSEG00000004238	mrpl30	100	66.875	ENSPFOG00000015775	mrpl30	100	66.875	Poecilia_formosa
ENSCSEG00000004238	mrpl30	100	66.875	ENSPLAG00000021371	mrpl30	100	66.875	Poecilia_latipinna
ENSCSEG00000004238	mrpl30	100	66.875	ENSPMEG00000006243	mrpl30	100	66.875	Poecilia_mexicana
ENSCSEG00000004238	mrpl30	100	65.625	ENSPREG00000008569	mrpl30	100	65.625	Poecilia_reticulata
ENSCSEG00000004238	mrpl30	55	62.651	ENSPCAG00000002174	-	66	62.651	Procavia_capensis
ENSCSEG00000004238	mrpl30	100	71.250	ENSPNYG00000014319	mrpl30	100	71.250	Pundamilia_nyererei
ENSCSEG00000004238	mrpl30	80	64.167	ENSPNAG00000009867	mrpl30	75	64.167	Pygocentrus_nattereri
ENSCSEG00000004238	mrpl30	98	58.503	ENSSFOG00015010917	mrpl30	90	58.503	Scleropages_formosus
ENSCSEG00000004238	mrpl30	100	71.698	ENSSMAG00000019930	mrpl30	100	71.698	Scophthalmus_maximus
ENSCSEG00000004238	mrpl30	100	71.698	ENSSDUG00000006705	mrpl30	100	71.698	Seriola_dumerili
ENSCSEG00000004238	mrpl30	100	71.698	ENSSLDG00000005509	mrpl30	100	71.698	Seriola_lalandi_dorsalis
ENSCSEG00000004238	mrpl30	83	54.839	ENSSPUG00000015069	-	76	54.839	Sphenodon_punctatus
ENSCSEG00000004238	mrpl30	83	62.400	ENSSPUG00000009351	-	77	62.400	Sphenodon_punctatus
ENSCSEG00000004238	mrpl30	100	66.250	ENSSPAG00000020142	mrpl30	100	66.250	Stegastes_partitus
ENSCSEG00000004238	mrpl30	77	60.345	ENSTGUG00000010133	-	99	60.345	Taeniopygia_guttata
ENSCSEG00000004238	mrpl30	99	67.296	ENSTRUG00000022654	mrpl30	99	67.296	Takifugu_rubripes
ENSCSEG00000004238	mrpl30	99	66.879	ENSTNIG00000013872	mrpl30	100	66.879	Tetraodon_nigroviridis
ENSCSEG00000004238	mrpl30	85	53.543	ENSVPAG00000011780	-	87	53.543	Vicugna_pacos
ENSCSEG00000004238	mrpl30	73	58.716	ENSVVUG00000010788	-	75	58.716	Vulpes_vulpes
ENSCSEG00000004238	mrpl30	94	51.333	ENSXETG00000026571	mrpl30	93	51.333	Xenopus_tropicalis
ENSCSEG00000004238	mrpl30	100	68.874	ENSXCOG00000018807	mrpl30	99	67.296	Xiphophorus_couchianus
ENSCSEG00000004238	mrpl30	100	69.375	ENSXMAG00000024725	mrpl30	100	69.375	Xiphophorus_maculatus