EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000004530 (Gene tree)
Gene ID: 103390703
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 18838 bases
Position: chr15:6315598-6334435
Accession: 103390703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007004	Nucleoplasmin	PF03066.15	5.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007079	-	4670	XM_008326652	ENSCSEP00000007004	297 (aa)	XP_008324874	-

Gene Model

Click here to download ENSCSEG00000004530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000004530	npm1b	96	37.631	ENSCSEG00000011165	npm1a	96	32.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004530	npm1b	100	79.333	ENSAPOG00000004268	npm1b	100	79.333	Acanthochromis_polyacanthus
ENSCSEG00000004530	npm1b	100	78.000	ENSAOCG00000012549	npm1b	100	78.859	Amphiprion_ocellaris
ENSCSEG00000004530	npm1b	100	78.333	ENSAPEG00000000868	npm1b	100	78.667	Amphiprion_percula
ENSCSEG00000004530	npm1b	100	80.000	ENSATEG00000006254	npm1b	100	80.667	Anabas_testudineus
ENSCSEG00000004530	npm1b	98	44.295	ENSACAG00000015626	-	96	43.986	Anolis_carolinensis
ENSCSEG00000004530	npm1b	98	61.333	ENSAMXG00000042148	npm1b	99	59.197	Astyanax_mexicanus
ENSCSEG00000004530	npm1b	83	34.524	ENSCAFG00000023359	-	59	37.908	Canis_familiaris
ENSCSEG00000004530	npm1b	96	44.932	ENSCPBG00000021221	-	60	45.246	Chrysemys_picta_bellii
ENSCSEG00000004530	npm1b	100	71.333	ENSCVAG00000013016	npm1b	100	73.000	Cyprinodon_variegatus
ENSCSEG00000004530	npm1b	99	63.279	ENSDARG00000037675	npm1b	99	61.513	Danio_rerio
ENSCSEG00000004530	npm1b	99	60.784	ENSELUG00000022123	npm1b	99	60.784	Esox_lucius
ENSCSEG00000004530	npm1b	94	46.341	ENSFALG00000003320	-	94	46.341	Ficedula_albicollis
ENSCSEG00000004530	npm1b	100	71.761	ENSFHEG00000020794	npm1b	100	71.761	Fundulus_heteroclitus
ENSCSEG00000004530	npm1b	98	62.838	ENSGMOG00000002689	npm1b	100	61.824	Gadus_morhua
ENSCSEG00000004530	npm1b	98	46.557	ENSGALG00000002197	-	73	47.213	Gallus_gallus
ENSCSEG00000004530	npm1b	100	71.000	ENSGAFG00000017709	npm1b	100	71.667	Gambusia_affinis
ENSCSEG00000004530	npm1b	98	76.109	ENSGACG00000016706	npm1b	100	77.474	Gasterosteus_aculeatus
ENSCSEG00000004530	npm1b	95	45.205	ENSGAGG00000020250	-	96	45.890	Gopherus_agassizii
ENSCSEG00000004530	npm1b	100	74.000	ENSHBUG00000019903	npm1b	95	76.667	Haplochromis_burtoni
ENSCSEG00000004530	npm1b	100	72.819	ENSHCOG00000003895	npm1b	100	72.819	Hippocampus_comes
ENSCSEG00000004530	npm1b	99	59.935	ENSIPUG00000020165	npm1b	99	57.843	Ictalurus_punctatus
ENSCSEG00000004530	npm1b	99	72.973	ENSKMAG00000008260	npm1b	99	73.311	Kryptolebias_marmoratus
ENSCSEG00000004530	npm1b	93	39.731	ENSLACG00000001779	-	99	40.203	Latimeria_chalumnae
ENSCSEG00000004530	npm1b	93	44.966	ENSLOCG00000001942	npm1b	99	45.973	Lepisosteus_oculatus
ENSCSEG00000004530	npm1b	72	74.886	ENSMAMG00000015335	npm1b	100	75.342	Mastacembelus_armatus
ENSCSEG00000004530	npm1b	93	47.183	ENSMGAG00000001591	-	100	47.887	Meleagris_gallopavo
ENSCSEG00000004530	npm1b	81	77.459	ENSMALG00000015383	npm1b	100	77.459	Monopterus_albus
ENSCSEG00000004530	npm1b	99	72.449	ENSONIG00000001397	npm1b	98	70.684	Oreochromis_niloticus
ENSCSEG00000004530	npm1b	100	61.667	ENSOMEG00000003414	npm1b	99	62.838	Oryzias_melastigma
ENSCSEG00000004530	npm1b	99	58.900	ENSPKIG00000020050	npm1b	99	59.223	Paramormyrops_kingsleyae
ENSCSEG00000004530	npm1b	96	46.284	ENSPSIG00000011204	-	92	45.890	Pelodiscus_sinensis
ENSCSEG00000004530	npm1b	93	36.364	ENSPMAG00000004930	npm1b	99	34.021	Petromyzon_marinus
ENSCSEG00000004530	npm1b	100	70.333	ENSPFOG00000018357	npm1b	100	71.333	Poecilia_formosa
ENSCSEG00000004530	npm1b	98	60.870	ENSPNAG00000005498	npm1b	99	58.725	Pygocentrus_nattereri
ENSCSEG00000004530	npm1b	99	55.369	ENSSFOG00015005064	npm1b	100	56.040	Scleropages_formosus
ENSCSEG00000004530	npm1b	100	77.333	ENSSMAG00000008088	npm1b	100	78.000	Scophthalmus_maximus
ENSCSEG00000004530	npm1b	100	82.000	ENSSDUG00000007726	npm1b	100	81.667	Seriola_dumerili
ENSCSEG00000004530	npm1b	100	82.333	ENSSLDG00000021396	npm1b	100	82.000	Seriola_lalandi_dorsalis
ENSCSEG00000004530	npm1b	100	79.667	ENSSPAG00000011152	npm1b	100	80.333	Stegastes_partitus
ENSCSEG00000004530	npm1b	93	45.139	ENSTGUG00000014970	-	100	44.599	Taeniopygia_guttata
ENSCSEG00000004530	npm1b	100	74.419	ENSTRUG00000008105	npm1b	95	74.419	Takifugu_rubripes
ENSCSEG00000004530	npm1b	99	70.667	ENSTNIG00000013057	npm1b	100	72.000	Tetraodon_nigroviridis
ENSCSEG00000004530	npm1b	98	45.515	ENSXETG00000008403	npm1	97	46.844	Xenopus_tropicalis
ENSCSEG00000004530	npm1b	100	70.333	ENSXMAG00000001986	npm1b	100	72.000	Xiphophorus_maculatus