EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000004538 (Gene tree)
Gene ID: 103383694
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC103383694
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 946 bases
Position: chr9:7426080-7427025
Accession: 103383694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007012	zf-CCCH	PF00642.24	8.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007087	-	859	XM_008316940	ENSCSEP00000007012	254 (aa)	XP_008315162	UPI000495D0B3

Gene Model

Click here to download ENSCSEG00000004538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004538	si:ch211-113e8.11	99	65.038	ENSAPOG00000010990	si:ch211-113e8.11	99	64.906	Acanthochromis_polyacanthus
ENSCSEG00000004538	si:ch211-113e8.11	57	62.329	ENSACIG00000011566	si:ch211-113e8.11	95	55.760	Amphilophus_citrinellus
ENSCSEG00000004538	si:ch211-113e8.11	99	65.152	ENSAOCG00000022156	si:ch211-113e8.11	99	65.152	Amphiprion_ocellaris
ENSCSEG00000004538	si:ch211-113e8.11	99	64.773	ENSAPEG00000018284	si:ch211-113e8.11	99	64.773	Amphiprion_percula
ENSCSEG00000004538	si:ch211-113e8.11	99	65.748	ENSATEG00000018391	si:ch211-113e8.11	99	65.748	Anabas_testudineus
ENSCSEG00000004538	si:ch211-113e8.11	99	58.755	ENSACLG00000017011	si:ch211-113e8.11	99	61.328	Astatotilapia_calliptera
ENSCSEG00000004538	si:ch211-113e8.11	97	50.000	ENSAMXG00000000733	si:ch211-113e8.11	97	50.388	Astyanax_mexicanus
ENSCSEG00000004538	si:ch211-113e8.11	99	53.725	ENSCVAG00000020156	si:ch211-113e8.11	99	54.118	Cyprinodon_variegatus
ENSCSEG00000004538	si:ch211-113e8.11	96	46.154	ENSDARG00000076585	si:ch211-113e8.11	99	49.206	Danio_rerio
ENSCSEG00000004538	si:ch211-113e8.11	99	53.962	ENSELUG00000001130	si:ch211-113e8.11	99	53.962	Esox_lucius
ENSCSEG00000004538	si:ch211-113e8.11	99	54.086	ENSFHEG00000007870	si:ch211-113e8.11	99	54.373	Fundulus_heteroclitus
ENSCSEG00000004538	si:ch211-113e8.11	99	57.312	ENSGAFG00000020570	si:ch211-113e8.11	99	58.498	Gambusia_affinis
ENSCSEG00000004538	si:ch211-113e8.11	99	58.755	ENSHBUG00000003552	si:ch211-113e8.11	99	60.938	Haplochromis_burtoni
ENSCSEG00000004538	si:ch211-113e8.11	99	53.077	ENSHCOG00000002041	si:ch211-113e8.11	99	53.077	Hippocampus_comes
ENSCSEG00000004538	si:ch211-113e8.11	96	47.154	ENSIPUG00000002260	si:ch211-113e8.11	94	48.413	Ictalurus_punctatus
ENSCSEG00000004538	si:ch211-113e8.11	99	55.642	ENSKMAG00000000086	si:ch211-113e8.11	99	56.371	Kryptolebias_marmoratus
ENSCSEG00000004538	si:ch211-113e8.11	99	56.343	ENSLBEG00000008353	si:ch211-113e8.11	99	59.851	Labrus_bergylta
ENSCSEG00000004538	si:ch211-113e8.11	59	42.000	ENSLACG00000004304	si:ch211-113e8.11	73	43.791	Latimeria_chalumnae
ENSCSEG00000004538	si:ch211-113e8.11	93	61.570	ENSMAMG00000019098	si:ch211-113e8.11	92	62.979	Mastacembelus_armatus
ENSCSEG00000004538	si:ch211-113e8.11	99	59.449	ENSMZEG00005023658	si:ch211-113e8.11	99	62.055	Maylandia_zebra
ENSCSEG00000004538	si:ch211-113e8.11	72	65.405	ENSMMOG00000007254	si:ch211-113e8.11	99	56.641	Mola_mola
ENSCSEG00000004538	si:ch211-113e8.11	99	63.985	ENSMALG00000005110	si:ch211-113e8.11	99	63.985	Monopterus_albus
ENSCSEG00000004538	si:ch211-113e8.11	99	59.533	ENSNBRG00000015060	si:ch211-113e8.11	99	62.109	Neolamprologus_brichardi
ENSCSEG00000004538	si:ch211-113e8.11	99	56.371	ENSORLG00000023699	si:ch211-113e8.11	99	56.757	Oryzias_latipes
ENSCSEG00000004538	si:ch211-113e8.11	99	57.529	ENSORLG00020022094	si:ch211-113e8.11	99	57.915	Oryzias_latipes_hni
ENSCSEG00000004538	si:ch211-113e8.11	99	55.294	ENSORLG00015002588	si:ch211-113e8.11	99	55.686	Oryzias_latipes_hsok
ENSCSEG00000004538	si:ch211-113e8.11	99	56.589	ENSOMEG00000010624	si:ch211-113e8.11	99	57.364	Oryzias_melastigma
ENSCSEG00000004538	si:ch211-113e8.11	54	51.773	ENSPKIG00000023576	si:ch211-113e8.11	94	44.444	Paramormyrops_kingsleyae
ENSCSEG00000004538	si:ch211-113e8.11	96	55.285	ENSPMGG00000018547	si:ch211-113e8.11	98	55.285	Periophthalmus_magnuspinnatus
ENSCSEG00000004538	si:ch211-113e8.11	98	57.769	ENSPFOG00000007950	si:ch211-113e8.11	100	59.761	Poecilia_formosa
ENSCSEG00000004538	si:ch211-113e8.11	99	58.203	ENSPLAG00000002081	si:ch211-113e8.11	99	59.766	Poecilia_latipinna
ENSCSEG00000004538	si:ch211-113e8.11	99	57.812	ENSPMEG00000017505	si:ch211-113e8.11	99	59.375	Poecilia_mexicana
ENSCSEG00000004538	si:ch211-113e8.11	99	59.289	ENSPREG00000008530	si:ch211-113e8.11	99	59.289	Poecilia_reticulata
ENSCSEG00000004538	si:ch211-113e8.11	99	59.144	ENSPNYG00000022856	si:ch211-113e8.11	99	61.719	Pundamilia_nyererei
ENSCSEG00000004538	si:ch211-113e8.11	98	44.361	ENSPNAG00000013782	si:ch211-113e8.11	99	43.985	Pygocentrus_nattereri
ENSCSEG00000004538	si:ch211-113e8.11	95	46.000	ENSSFOG00015000959	si:ch211-113e8.11	97	47.177	Scleropages_formosus
ENSCSEG00000004538	si:ch211-113e8.11	99	63.077	ENSSMAG00000009732	si:ch211-113e8.11	99	64.615	Scophthalmus_maximus
ENSCSEG00000004538	si:ch211-113e8.11	99	68.199	ENSSDUG00000000112	si:ch211-113e8.11	99	69.349	Seriola_dumerili
ENSCSEG00000004538	si:ch211-113e8.11	99	67.433	ENSSLDG00000003287	si:ch211-113e8.11	99	68.582	Seriola_lalandi_dorsalis
ENSCSEG00000004538	si:ch211-113e8.11	99	66.279	ENSSPAG00000001375	si:ch211-113e8.11	99	66.279	Stegastes_partitus
ENSCSEG00000004538	si:ch211-113e8.11	100	53.846	ENSTRUG00000023898	si:ch211-113e8.11	100	53.846	Takifugu_rubripes
ENSCSEG00000004538	si:ch211-113e8.11	99	56.299	ENSXMAG00000024104	si:ch211-113e8.11	99	56.299	Xiphophorus_maculatus