EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000004543 (Gene tree)
Gene ID: 103388380
Gene Symbol: ccdc12
Alias: zgc:101038
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5083 bases
Position: chr13:8266064-8271146
Accession: 103388380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007021	cwf18	PF08315.12	2.5e-39	1	1
ENSCSEP00000007028	cwf18	PF08315.12	1.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007096	-	604	XM_008323331	ENSCSEP00000007021	163 (aa)	XP_008321553	UPI0004954441
ENSCSET00000007103	-	453	-	ENSCSEP00000007028	150 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000004543's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004543	ccdc12	93	69.935	ENSG00000160799	CCDC12	91	69.935	Homo_sapiens
ENSCSEG00000004543	ccdc12	100	90.184	ENSAPOG00000014426	ccdc12	60	90.184	Acanthochromis_polyacanthus
ENSCSEG00000004543	ccdc12	93	70.588	ENSAMEG00000012658	CCDC12	91	70.588	Ailuropoda_melanoleuca
ENSCSEG00000004543	ccdc12	81	89.256	ENSACIG00000015192	ccdc12	86	89.256	Amphilophus_citrinellus
ENSCSEG00000004543	ccdc12	74	94.595	ENSACIG00000022676	-	86	90.909	Amphilophus_citrinellus
ENSCSEG00000004543	ccdc12	98	89.937	ENSAOCG00000024127	ccdc12	95	89.937	Amphiprion_ocellaris
ENSCSEG00000004543	ccdc12	100	89.571	ENSAPEG00000009155	ccdc12	86	89.571	Amphiprion_percula
ENSCSEG00000004543	ccdc12	82	93.284	ENSATEG00000004807	ccdc12	100	93.284	Anabas_testudineus
ENSCSEG00000004543	ccdc12	79	73.077	ENSAPLG00000005482	CCDC12	95	73.077	Anas_platyrhynchos
ENSCSEG00000004543	ccdc12	100	71.257	ENSACAG00000004727	CCDC12	86	71.257	Anolis_carolinensis
ENSCSEG00000004543	ccdc12	76	71.774	ENSANAG00000024483	CCDC12	93	71.200	Aotus_nancymaae
ENSCSEG00000004543	ccdc12	95	77.419	ENSACLG00000012742	-	96	77.419	Astatotilapia_calliptera
ENSCSEG00000004543	ccdc12	100	87.730	ENSACLG00000005356	ccdc12	100	87.730	Astatotilapia_calliptera
ENSCSEG00000004543	ccdc12	100	81.595	ENSAMXG00000016319	ccdc12	100	81.595	Astyanax_mexicanus
ENSCSEG00000004543	ccdc12	88	71.724	ENSBTAG00000011311	CCDC12	91	69.032	Bos_taurus
ENSCSEG00000004543	ccdc12	83	41.176	WBGene00022092	Y69A2AR.21	86	39.216	Caenorhabditis_elegans
ENSCSEG00000004543	ccdc12	93	70.395	ENSCJAG00000002280	CCDC12	91	69.935	Callithrix_jacchus
ENSCSEG00000004543	ccdc12	93	70.588	ENSCAFG00000013588	CCDC12	91	70.588	Canis_familiaris
ENSCSEG00000004543	ccdc12	93	70.588	ENSCAFG00020014024	CCDC12	84	70.588	Canis_lupus_dingo
ENSCSEG00000004543	ccdc12	88	71.724	ENSCHIG00000014512	CCDC12	91	69.032	Capra_hircus
ENSCSEG00000004543	ccdc12	93	69.737	ENSTSYG00000032837	CCDC12	90	69.737	Carlito_syrichta
ENSCSEG00000004543	ccdc12	93	70.588	ENSCPOG00000032515	CCDC12	91	70.588	Cavia_porcellus
ENSCSEG00000004543	ccdc12	93	69.935	ENSCCAG00000020126	CCDC12	84	69.935	Cebus_capucinus
ENSCSEG00000004543	ccdc12	93	58.170	ENSCATG00000033681	CCDC12	83	58.170	Cercocebus_atys
ENSCSEG00000004543	ccdc12	93	71.053	ENSCLAG00000016013	CCDC12	90	71.053	Chinchilla_lanigera
ENSCSEG00000004543	ccdc12	93	69.281	ENSCSAG00000016154	CCDC12	84	69.281	Chlorocebus_sabaeus
ENSCSEG00000004543	ccdc12	98	70.807	ENSCPBG00000015804	CCDC12	77	70.807	Chrysemys_picta_bellii
ENSCSEG00000004543	ccdc12	99	50.968	ENSCING00000005261	-	95	50.968	Ciona_intestinalis
ENSCSEG00000004543	ccdc12	93	69.281	ENSCANG00000020857	CCDC12	84	69.281	Colobus_angolensis_palliatus
ENSCSEG00000004543	ccdc12	98	69.136	ENSCGRG00001000459	Ccdc12	96	69.136	Cricetulus_griseus_chok1gshd
ENSCSEG00000004543	ccdc12	98	69.136	ENSCGRG00000012816	Ccdc12	96	69.136	Cricetulus_griseus_crigri
ENSCSEG00000004543	ccdc12	82	91.791	ENSCVAG00000011342	ccdc12	100	91.791	Cyprinodon_variegatus
ENSCSEG00000004543	ccdc12	100	83.436	ENSDARG00000023003	ccdc12	100	83.436	Danio_rerio
ENSCSEG00000004543	ccdc12	98	62.112	ENSDORG00000024399	-	96	62.112	Dipodomys_ordii
ENSCSEG00000004543	ccdc12	88	68.966	ENSDORG00000016567	-	96	68.323	Dipodomys_ordii
ENSCSEG00000004543	ccdc12	99	42.763	FBgn0039732	CG15525	94	42.763	Drosophila_melanogaster
ENSCSEG00000004543	ccdc12	66	64.220	ENSETEG00000000030	CCDC12	95	64.220	Echinops_telfairi
ENSCSEG00000004543	ccdc12	100	57.927	ENSEBUG00000005674	ccdc12	100	59.146	Eptatretus_burgeri
ENSCSEG00000004543	ccdc12	93	70.395	ENSEASG00005008148	-	62	70.395	Equus_asinus_asinus
ENSCSEG00000004543	ccdc12	93	64.474	ENSECAG00000008649	CCDC12	90	64.474	Equus_caballus
ENSCSEG00000004543	ccdc12	100	81.212	ENSELUG00000024105	ccdc12	100	81.212	Esox_lucius
ENSCSEG00000004543	ccdc12	93	69.935	ENSFCAG00000015474	CCDC12	91	69.935	Felis_catus
ENSCSEG00000004543	ccdc12	95	63.291	ENSFALG00000001895	CCDC12	97	63.291	Ficedula_albicollis
ENSCSEG00000004543	ccdc12	93	70.588	ENSFDAG00000002549	CCDC12	92	70.588	Fukomys_damarensis
ENSCSEG00000004543	ccdc12	100	91.411	ENSFHEG00000016247	ccdc12	93	91.411	Fundulus_heteroclitus
ENSCSEG00000004543	ccdc12	100	73.620	ENSGMOG00000016901	ccdc12	100	73.620	Gadus_morhua
ENSCSEG00000004543	ccdc12	100	90.798	ENSGAFG00000006762	ccdc12	100	90.798	Gambusia_affinis
ENSCSEG00000004543	ccdc12	100	86.503	ENSGACG00000008629	ccdc12	100	86.503	Gasterosteus_aculeatus
ENSCSEG00000004543	ccdc12	98	71.250	ENSGAGG00000019688	CCDC12	95	71.250	Gopherus_agassizii
ENSCSEG00000004543	ccdc12	93	69.935	ENSGGOG00000009012	CCDC12	84	69.935	Gorilla_gorilla
ENSCSEG00000004543	ccdc12	100	87.730	ENSHBUG00000016447	ccdc12	100	87.730	Haplochromis_burtoni
ENSCSEG00000004543	ccdc12	93	71.053	ENSHGLG00000014058	CCDC12	90	71.053	Heterocephalus_glaber_female
ENSCSEG00000004543	ccdc12	93	71.053	ENSHGLG00100005918	CCDC12	90	71.053	Heterocephalus_glaber_male
ENSCSEG00000004543	ccdc12	100	87.195	ENSHCOG00000015164	ccdc12	100	87.195	Hippocampus_comes
ENSCSEG00000004543	ccdc12	99	74.691	ENSIPUG00000001310	Ccdc12	99	74.691	Ictalurus_punctatus
ENSCSEG00000004543	ccdc12	93	71.711	ENSSTOG00000003085	CCDC12	91	71.242	Ictidomys_tridecemlineatus
ENSCSEG00000004543	ccdc12	98	67.284	ENSJJAG00000014918	Ccdc12	95	72.000	Jaculus_jaculus
ENSCSEG00000004543	ccdc12	100	84.848	ENSKMAG00000013891	ccdc12	100	84.848	Kryptolebias_marmoratus
ENSCSEG00000004543	ccdc12	99	90.123	ENSLBEG00000024714	ccdc12	86	90.123	Labrus_bergylta
ENSCSEG00000004543	ccdc12	100	80.982	ENSLOCG00000005683	ccdc12	92	80.982	Lepisosteus_oculatus
ENSCSEG00000004543	ccdc12	94	67.320	ENSLAFG00000027745	-	93	67.320	Loxodonta_africana
ENSCSEG00000004543	ccdc12	70	78.095	ENSLAFG00000022573	-	92	78.095	Loxodonta_africana
ENSCSEG00000004543	ccdc12	93	69.281	ENSMFAG00000002976	CCDC12	84	69.281	Macaca_fascicularis
ENSCSEG00000004543	ccdc12	93	69.281	ENSMMUG00000019810	CCDC12	84	69.281	Macaca_mulatta
ENSCSEG00000004543	ccdc12	93	69.281	ENSMNEG00000035785	CCDC12	84	69.281	Macaca_nemestrina
ENSCSEG00000004543	ccdc12	93	69.281	ENSMLEG00000038060	CCDC12	84	69.281	Mandrillus_leucophaeus
ENSCSEG00000004543	ccdc12	91	93.243	ENSMAMG00000012165	ccdc12	100	91.411	Mastacembelus_armatus
ENSCSEG00000004543	ccdc12	100	88.344	ENSMZEG00005014728	ccdc12	100	88.344	Maylandia_zebra
ENSCSEG00000004543	ccdc12	95	78.065	ENSMZEG00005019013	-	96	78.065	Maylandia_zebra
ENSCSEG00000004543	ccdc12	79	72.308	ENSMGAG00000002815	CCDC12	90	66.250	Meleagris_gallopavo
ENSCSEG00000004543	ccdc12	96	67.722	ENSMAUG00000008879	Ccdc12	94	67.722	Mesocricetus_auratus
ENSCSEG00000004543	ccdc12	93	68.831	ENSMICG00000032886	CCDC12	91	70.130	Microcebus_murinus
ENSCSEG00000004543	ccdc12	98	68.519	ENSMOCG00000004483	Ccdc12	96	68.519	Microtus_ochrogaster
ENSCSEG00000004543	ccdc12	74	90.991	ENSMMOG00000001860	ccdc12	77	90.991	Mola_mola
ENSCSEG00000004543	ccdc12	90	74.667	ENSMODG00000013967	-	91	75.333	Monodelphis_domestica
ENSCSEG00000004543	ccdc12	90	66.667	ENSMODG00000025021	-	91	66.667	Monodelphis_domestica
ENSCSEG00000004543	ccdc12	90	64.667	ENSMODG00000022615	-	91	64.667	Monodelphis_domestica
ENSCSEG00000004543	ccdc12	100	90.798	ENSMALG00000011850	ccdc12	100	90.798	Monopterus_albus
ENSCSEG00000004543	ccdc12	98	69.136	MGP_CAROLIEiJ_G0032737	-	96	69.136	Mus_caroli
ENSCSEG00000004543	ccdc12	98	68.519	ENSMUSG00000019659	Ccdc12	96	68.519	Mus_musculus
ENSCSEG00000004543	ccdc12	98	69.136	MGP_PahariEiJ_G0015604	Ccdc12	96	69.136	Mus_pahari
ENSCSEG00000004543	ccdc12	98	68.519	MGP_SPRETEiJ_G0033885	Ccdc12	96	68.519	Mus_spretus
ENSCSEG00000004543	ccdc12	93	66.667	ENSMLUG00000009547	CCDC12	91	66.667	Myotis_lucifugus
ENSCSEG00000004543	ccdc12	98	67.901	ENSNGAG00000004149	Ccdc12	96	67.901	Nannospalax_galili
ENSCSEG00000004543	ccdc12	100	81.132	ENSNBRG00000015275	ccdc12	100	81.132	Neolamprologus_brichardi
ENSCSEG00000004543	ccdc12	93	70.395	ENSNLEG00000006219	CCDC12	90	70.395	Nomascus_leucogenys
ENSCSEG00000004543	ccdc12	93	66.667	ENSOPRG00000005086	CCDC12	91	67.320	Ochotona_princeps
ENSCSEG00000004543	ccdc12	94	70.130	ENSODEG00000012202	CCDC12	92	70.130	Octodon_degus
ENSCSEG00000004543	ccdc12	100	88.344	ENSONIG00000003061	ccdc12	100	88.344	Oreochromis_niloticus
ENSCSEG00000004543	ccdc12	74	78.378	ENSOANG00000004263	-	99	71.970	Ornithorhynchus_anatinus
ENSCSEG00000004543	ccdc12	93	69.935	ENSOCUG00000012431	CCDC12	77	69.935	Oryctolagus_cuniculus
ENSCSEG00000004543	ccdc12	100	86.667	ENSORLG00000008126	ccdc12	100	86.667	Oryzias_latipes
ENSCSEG00000004543	ccdc12	100	88.344	ENSORLG00020013927	ccdc12	100	88.344	Oryzias_latipes_hni
ENSCSEG00000004543	ccdc12	100	88.344	ENSORLG00015020115	ccdc12	100	88.344	Oryzias_latipes_hsok
ENSCSEG00000004543	ccdc12	100	89.571	ENSOMEG00000022304	ccdc12	100	89.571	Oryzias_melastigma
ENSCSEG00000004543	ccdc12	100	89.571	ENSOMEG00000014082	ccdc12	100	89.571	Oryzias_melastigma
ENSCSEG00000004543	ccdc12	69	75.962	ENSOGAG00000016807	CCDC12	93	75.962	Otolemur_garnettii
ENSCSEG00000004543	ccdc12	64	81.250	ENSOARG00000006426	CCDC12	93	69.531	Ovis_aries
ENSCSEG00000004543	ccdc12	93	69.935	ENSPPAG00000028782	CCDC12	84	69.935	Pan_paniscus
ENSCSEG00000004543	ccdc12	93	69.935	ENSPPRG00000013547	CCDC12	91	69.935	Panthera_pardus
ENSCSEG00000004543	ccdc12	93	69.935	ENSPTIG00000014875	CCDC12	87	69.935	Panthera_tigris_altaica
ENSCSEG00000004543	ccdc12	93	69.935	ENSPTRG00000014862	CCDC12	84	69.935	Pan_troglodytes
ENSCSEG00000004543	ccdc12	93	69.281	ENSPANG00000017485	CCDC12	86	69.281	Papio_anubis
ENSCSEG00000004543	ccdc12	100	73.171	ENSPKIG00000019130	ccdc12	100	76.220	Paramormyrops_kingsleyae
ENSCSEG00000004543	ccdc12	74	83.784	ENSPSIG00000010867	CCDC12	100	83.784	Pelodiscus_sinensis
ENSCSEG00000004543	ccdc12	100	86.503	ENSPMGG00000012211	ccdc12	100	86.503	Periophthalmus_magnuspinnatus
ENSCSEG00000004543	ccdc12	98	54.321	ENSPEMG00000001376	-	96	54.321	Peromyscus_maniculatus_bairdii
ENSCSEG00000004543	ccdc12	98	69.136	ENSPEMG00000022196	-	96	69.136	Peromyscus_maniculatus_bairdii
ENSCSEG00000004543	ccdc12	96	70.064	ENSPMAG00000000005	ccdc12	92	70.064	Petromyzon_marinus
ENSCSEG00000004543	ccdc12	90	75.676	ENSPCIG00000025941	CCDC12	91	75.676	Phascolarctos_cinereus
ENSCSEG00000004543	ccdc12	88	93.750	ENSPFOG00000000343	ccdc12	100	92.025	Poecilia_formosa
ENSCSEG00000004543	ccdc12	100	92.025	ENSPLAG00000019010	ccdc12	100	92.025	Poecilia_latipinna
ENSCSEG00000004543	ccdc12	88	93.750	ENSPMEG00000022371	ccdc12	81	92.025	Poecilia_mexicana
ENSCSEG00000004543	ccdc12	100	92.638	ENSPREG00000020932	ccdc12	81	92.638	Poecilia_reticulata
ENSCSEG00000004543	ccdc12	93	69.935	ENSPPYG00000013924	CCDC12	75	69.935	Pongo_abelii
ENSCSEG00000004543	ccdc12	94	70.130	ENSPCAG00000005800	CCDC12	92	70.130	Procavia_capensis
ENSCSEG00000004543	ccdc12	93	68.831	ENSPCOG00000018682	CCDC12	84	70.130	Propithecus_coquereli
ENSCSEG00000004543	ccdc12	93	70.395	ENSPVAG00000004204	CCDC12	90	70.395	Pteropus_vampyrus
ENSCSEG00000004543	ccdc12	100	88.344	ENSPNYG00000016295	ccdc12	100	88.344	Pundamilia_nyererei
ENSCSEG00000004543	ccdc12	81	85.124	ENSPNAG00000028558	ccdc12	98	85.124	Pygocentrus_nattereri
ENSCSEG00000004543	ccdc12	98	69.136	ENSRNOG00000020946	Ccdc12	96	69.136	Rattus_norvegicus
ENSCSEG00000004543	ccdc12	93	69.281	ENSRBIG00000039910	CCDC12	84	69.281	Rhinopithecus_bieti
ENSCSEG00000004543	ccdc12	93	69.281	ENSRROG00000039721	CCDC12	91	69.281	Rhinopithecus_roxellana
ENSCSEG00000004543	ccdc12	93	69.935	ENSSBOG00000035443	CCDC12	84	69.935	Saimiri_boliviensis_boliviensis
ENSCSEG00000004543	ccdc12	90	76.351	ENSSHAG00000003265	-	91	76.351	Sarcophilus_harrisii
ENSCSEG00000004543	ccdc12	100	76.220	ENSSFOG00015001307	ccdc12	100	76.220	Scleropages_formosus
ENSCSEG00000004543	ccdc12	91	90.541	ENSSMAG00000019856	ccdc12	100	88.415	Scophthalmus_maximus
ENSCSEG00000004543	ccdc12	100	88.344	ENSSDUG00000006549	ccdc12	100	88.344	Seriola_dumerili
ENSCSEG00000004543	ccdc12	100	92.638	ENSSLDG00000015956	ccdc12	100	92.638	Seriola_lalandi_dorsalis
ENSCSEG00000004543	ccdc12	89	51.408	ENSSPUG00000013054	CCDC12	91	51.408	Sphenodon_punctatus
ENSCSEG00000004543	ccdc12	100	89.571	ENSSPAG00000007010	ccdc12	100	89.571	Stegastes_partitus
ENSCSEG00000004543	ccdc12	93	44.604	ENSSSCG00000007882	-	95	44.604	Sus_scrofa
ENSCSEG00000004543	ccdc12	98	67.702	ENSSSCG00000011329	-	96	67.702	Sus_scrofa
ENSCSEG00000004543	ccdc12	66	65.138	ENSTGUG00000000186	CCDC12	86	65.138	Taeniopygia_guttata
ENSCSEG00000004543	ccdc12	100	83.553	ENSTRUG00000014023	ccdc12	85	83.553	Takifugu_rubripes
ENSCSEG00000004543	ccdc12	100	82.822	ENSTNIG00000018407	ccdc12	98	82.822	Tetraodon_nigroviridis
ENSCSEG00000004543	ccdc12	98	47.561	ENSTBEG00000000048	CCDC12	96	47.561	Tupaia_belangeri
ENSCSEG00000004543	ccdc12	98	64.815	ENSTTRG00000015854	CCDC12	96	64.815	Tursiops_truncatus
ENSCSEG00000004543	ccdc12	93	64.052	ENSUAMG00000025548	CCDC12	93	72.794	Ursus_americanus
ENSCSEG00000004543	ccdc12	93	70.588	ENSUMAG00000004346	CCDC12	91	70.588	Ursus_maritimus
ENSCSEG00000004543	ccdc12	66	58.716	ENSVPAG00000000070	-	95	58.716	Vicugna_pacos
ENSCSEG00000004543	ccdc12	93	70.588	ENSVVUG00000004582	CCDC12	91	70.588	Vulpes_vulpes
ENSCSEG00000004543	ccdc12	82	72.388	ENSXETG00000013123	ccdc12	99	72.388	Xenopus_tropicalis
ENSCSEG00000004543	ccdc12	100	92.025	ENSXCOG00000019741	ccdc12	100	92.025	Xiphophorus_couchianus
ENSCSEG00000004543	ccdc12	100	92.025	ENSXMAG00000014098	ccdc12	81	92.025	Xiphophorus_maculatus