EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000004545 (Gene tree)
Gene ID: 103383693
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4563 bases
Position: chr9:7439618-7444180
Accession: 103383693
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000007029	RRM_1	PF00076.22	2.6e-39	1	3
ENSCSEP00000007029	RRM_1	PF00076.22	2.6e-39	2	3
ENSCSEP00000007029	RRM_1	PF00076.22	2.6e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000007104	-	1773	XM_008316935	ENSCSEP00000007029	590 (aa)	XP_008315157	-

Gene Model

Click here to download ENSCSEG00000004545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000004545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000004545	rbm47	51	54.248	ENSCSEG00000008039	hnrnpr	64	47.222
ENSCSEG00000004545	rbm47	74	55.484	ENSCSEG00000002361	a1cf	90	50.738
ENSCSEG00000004545	rbm47	51	52.980	ENSCSEG00000005893	syncrip	54	47.594
ENSCSEG00000004545	rbm47	51	54.305	ENSCSEG00000002468	syncripl	73	47.277

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000004545	rbm47	100	73.000	ENSG00000163694	RBM47	100	83.871	Homo_sapiens
ENSCSEG00000004545	rbm47	100	89.580	ENSAPOG00000011062	rbm47	100	89.748	Acanthochromis_polyacanthus
ENSCSEG00000004545	rbm47	100	72.471	ENSAMEG00000009672	RBM47	100	74.295	Ailuropoda_melanoleuca
ENSCSEG00000004545	rbm47	100	90.694	ENSACIG00000011531	rbm47	100	90.694	Amphilophus_citrinellus
ENSCSEG00000004545	rbm47	100	91.554	ENSAOCG00000022245	rbm47	100	91.385	Amphiprion_ocellaris
ENSCSEG00000004545	rbm47	100	91.709	ENSAPEG00000018304	rbm47	100	91.540	Amphiprion_percula
ENSCSEG00000004545	rbm47	100	88.962	ENSATEG00000018400	rbm47	94	91.958	Anabas_testudineus
ENSCSEG00000004545	rbm47	100	75.083	ENSAPLG00000013974	RBM47	100	73.667	Anas_platyrhynchos
ENSCSEG00000004545	rbm47	100	74.295	ENSACAG00000011833	RBM47	100	74.461	Anolis_carolinensis
ENSCSEG00000004545	rbm47	100	74.252	ENSANAG00000029440	RBM47	95	82.804	Aotus_nancymaae
ENSCSEG00000004545	rbm47	100	88.033	ENSACLG00000016902	rbm47	93	93.785	Astatotilapia_calliptera
ENSCSEG00000004545	rbm47	97	82.586	ENSAMXG00000021794	rbm47	95	81.520	Astyanax_mexicanus
ENSCSEG00000004545	rbm47	100	73.993	ENSBTAG00000002356	RBM47	100	75.585	Bos_taurus
ENSCSEG00000004545	rbm47	98	75.129	ENSCJAG00000019385	RBM47	95	82.540	Callithrix_jacchus
ENSCSEG00000004545	rbm47	97	75.521	ENSCAFG00000015898	RBM47	100	74.333	Canis_familiaris
ENSCSEG00000004545	rbm47	83	77.688	ENSCAFG00020010558	RBM47	94	81.003	Canis_lupus_dingo
ENSCSEG00000004545	rbm47	100	73.993	ENSCHIG00000026214	RBM47	100	75.585	Capra_hircus
ENSCSEG00000004545	rbm47	86	65.891	ENSTSYG00000033612	RBM47	93	64.729	Carlito_syrichta
ENSCSEG00000004545	rbm47	100	70.854	ENSCAPG00000008426	RBM47	100	70.687	Cavia_aperea
ENSCSEG00000004545	rbm47	100	75.084	ENSCPOG00000014100	RBM47	100	75.920	Cavia_porcellus
ENSCSEG00000004545	rbm47	99	54.271	ENSCCAG00000024397	-	99	52.931	Cebus_capucinus
ENSCSEG00000004545	rbm47	100	75.585	ENSCCAG00000030129	-	95	82.540	Cebus_capucinus
ENSCSEG00000004545	rbm47	100	73.737	ENSCATG00000042064	RBM47	95	83.069	Cercocebus_atys
ENSCSEG00000004545	rbm47	100	74.874	ENSCLAG00000001684	RBM47	100	79.747	Chinchilla_lanigera
ENSCSEG00000004545	rbm47	100	73.000	ENSCSAG00000017060	RBM47	100	74.917	Chlorocebus_sabaeus
ENSCSEG00000004545	rbm47	89	73.094	ENSCHOG00000011731	RBM47	88	76.116	Choloepus_hoffmanni
ENSCSEG00000004545	rbm47	100	76.910	ENSCPBG00000013831	RBM47	100	76.167	Chrysemys_picta_bellii
ENSCSEG00000004545	rbm47	100	74.329	ENSCANG00000019997	RBM47	95	82.804	Colobus_angolensis_palliatus
ENSCSEG00000004545	rbm47	100	74.295	ENSCGRG00001000623	-	100	74.295	Cricetulus_griseus_chok1gshd
ENSCSEG00000004545	rbm47	88	76.253	ENSCGRG00001020102	-	100	77.573	Cricetulus_griseus_chok1gshd
ENSCSEG00000004545	rbm47	100	73.466	ENSCGRG00000007762	-	100	79.747	Cricetulus_griseus_crigri
ENSCSEG00000004545	rbm47	88	75.989	ENSCGRG00000014760	-	96	80.168	Cricetulus_griseus_crigri
ENSCSEG00000004545	rbm47	100	88.814	ENSCVAG00000020144	rbm47	100	88.814	Cyprinodon_variegatus
ENSCSEG00000004545	rbm47	100	79.803	ENSDARG00000061985	rbm47	95	82.465	Danio_rerio
ENSCSEG00000004545	rbm47	100	73.401	ENSDNOG00000046854	RBM47	100	76.174	Dasypus_novemcinctus
ENSCSEG00000004545	rbm47	100	74.338	ENSDORG00000010144	Rbm47	100	74.503	Dipodomys_ordii
ENSCSEG00000004545	rbm47	97	74.742	ENSETEG00000009194	RBM47	100	74.457	Echinops_telfairi
ENSCSEG00000004545	rbm47	95	60.208	ENSEBUG00000011912	rbm47	95	60.312	Eptatretus_burgeri
ENSCSEG00000004545	rbm47	100	73.658	ENSEASG00005008443	RBM47	100	75.920	Equus_asinus_asinus
ENSCSEG00000004545	rbm47	100	73.658	ENSECAG00000004400	RBM47	100	75.920	Equus_caballus
ENSCSEG00000004545	rbm47	75	80.087	ENSEEUG00000001194	RBM47	75	83.117	Erinaceus_europaeus
ENSCSEG00000004545	rbm47	100	78.282	ENSELUG00000006148	rbm47	93	89.722	Esox_lucius
ENSCSEG00000004545	rbm47	100	74.329	ENSFCAG00000012399	RBM47	100	76.007	Felis_catus
ENSCSEG00000004545	rbm47	100	75.914	ENSFALG00000002861	RBM47	100	76.333	Ficedula_albicollis
ENSCSEG00000004545	rbm47	100	74.497	ENSFDAG00000016326	RBM47	100	74.161	Fukomys_damarensis
ENSCSEG00000004545	rbm47	100	87.288	ENSFHEG00000007938	rbm47	100	87.288	Fundulus_heteroclitus
ENSCSEG00000004545	rbm47	100	80.484	ENSGMOG00000014802	rbm47	93	82.759	Gadus_morhua
ENSCSEG00000004545	rbm47	63	83.947	ENSGALG00000014267	RBM47	99	83.069	Gallus_gallus
ENSCSEG00000004545	rbm47	63	90.860	ENSGAFG00000020571	rbm47	98	90.860	Gambusia_affinis
ENSCSEG00000004545	rbm47	100	86.207	ENSGACG00000016223	rbm47	93	91.785	Gasterosteus_aculeatus
ENSCSEG00000004545	rbm47	100	77.076	ENSGAGG00000020051	RBM47	100	76.333	Gopherus_agassizii
ENSCSEG00000004545	rbm47	100	73.737	ENSGGOG00000001367	RBM47	95	83.069	Gorilla_gorilla
ENSCSEG00000004545	rbm47	100	87.908	ENSHBUG00000003520	rbm47	95	90.328	Haplochromis_burtoni
ENSCSEG00000004545	rbm47	84	63.130	ENSHGLG00000016914	RBM47	100	78.481	Heterocephalus_glaber_female
ENSCSEG00000004545	rbm47	100	67.504	ENSHGLG00100003071	-	100	66.834	Heterocephalus_glaber_male
ENSCSEG00000004545	rbm47	100	74.707	ENSHGLG00100014028	-	100	78.481	Heterocephalus_glaber_male
ENSCSEG00000004545	rbm47	99	89.207	ENSHCOG00000002074	rbm47	99	89.207	Hippocampus_comes
ENSCSEG00000004545	rbm47	100	81.956	ENSIPUG00000004743	rbm47	100	81.450	Ictalurus_punctatus
ENSCSEG00000004545	rbm47	100	73.877	ENSSTOG00000004727	RBM47	100	78.481	Ictidomys_tridecemlineatus
ENSCSEG00000004545	rbm47	100	73.964	ENSJJAG00000013823	Rbm47	100	74.295	Jaculus_jaculus
ENSCSEG00000004545	rbm47	100	88.294	ENSKMAG00000000084	rbm47	100	87.960	Kryptolebias_marmoratus
ENSCSEG00000004545	rbm47	100	89.713	ENSLBEG00000008436	rbm47	100	89.713	Labrus_bergylta
ENSCSEG00000004545	rbm47	100	76.549	ENSLACG00000007196	RBM47	100	76.549	Latimeria_chalumnae
ENSCSEG00000004545	rbm47	100	80.705	ENSLOCG00000012966	rbm47	95	79.664	Lepisosteus_oculatus
ENSCSEG00000004545	rbm47	100	75.000	ENSLAFG00000011998	RBM47	100	74.791	Loxodonta_africana
ENSCSEG00000004545	rbm47	100	73.737	ENSMFAG00000037967	RBM47	95	83.069	Macaca_fascicularis
ENSCSEG00000004545	rbm47	100	73.000	ENSMMUG00000012036	RBM47	100	81.865	Macaca_mulatta
ENSCSEG00000004545	rbm47	100	79.365	ENSMNEG00000040774	RBM47	95	83.069	Macaca_nemestrina
ENSCSEG00000004545	rbm47	100	82.222	ENSMLEG00000041432	RBM47	100	84.444	Mandrillus_leucophaeus
ENSCSEG00000004545	rbm47	100	89.604	ENSMAMG00000019143	rbm47	92	94.915	Mastacembelus_armatus
ENSCSEG00000004545	rbm47	100	88.033	ENSMZEG00005023659	rbm47	93	93.785	Maylandia_zebra
ENSCSEG00000004545	rbm47	100	76.159	ENSMGAG00000012226	RBM47	100	75.415	Meleagris_gallopavo
ENSCSEG00000004545	rbm47	100	73.000	ENSMAUG00000006493	Rbm47	100	79.114	Mesocricetus_auratus
ENSCSEG00000004545	rbm47	100	76.923	ENSMICG00000026417	RBM47	100	73.737	Microcebus_murinus
ENSCSEG00000004545	rbm47	100	80.371	ENSMOCG00000021170	Rbm47	100	79.114	Microtus_ochrogaster
ENSCSEG00000004545	rbm47	100	87.459	ENSMMOG00000007260	rbm47	94	90.210	Mola_mola
ENSCSEG00000004545	rbm47	100	76.040	ENSMODG00000007003	RBM47	100	74.958	Monodelphis_domestica
ENSCSEG00000004545	rbm47	100	72.529	ENSMODG00000020561	-	96	73.124	Monodelphis_domestica
ENSCSEG00000004545	rbm47	52	77.492	ENSMODG00000015426	-	97	77.742	Monodelphis_domestica
ENSCSEG00000004545	rbm47	100	90.339	ENSMALG00000005167	rbm47	100	90.339	Monopterus_albus
ENSCSEG00000004545	rbm47	100	80.000	MGP_CAROLIEiJ_G0027258	Rbm47	100	78.481	Mus_caroli
ENSCSEG00000004545	rbm47	100	80.000	ENSMUSG00000070780	Rbm47	100	78.481	Mus_musculus
ENSCSEG00000004545	rbm47	100	80.263	MGP_PahariEiJ_G0017040	Rbm47	100	79.114	Mus_pahari
ENSCSEG00000004545	rbm47	100	80.000	MGP_SPRETEiJ_G0028253	Rbm47	100	78.481	Mus_spretus
ENSCSEG00000004545	rbm47	100	73.167	ENSMPUG00000006177	RBM47	94	74.667	Mustela_putorius_furo
ENSCSEG00000004545	rbm47	100	74.664	ENSMLUG00000000889	RBM47	100	74.329	Myotis_lucifugus
ENSCSEG00000004545	rbm47	100	74.585	ENSNGAG00000003325	Rbm47	100	74.585	Nannospalax_galili
ENSCSEG00000004545	rbm47	100	87.889	ENSNBRG00000015092	rbm47	95	90.484	Neolamprologus_brichardi
ENSCSEG00000004545	rbm47	100	73.401	ENSNLEG00000017151	RBM47	95	83.069	Nomascus_leucogenys
ENSCSEG00000004545	rbm47	73	78.372	ENSMEUG00000009516	-	99	79.108	Notamacropus_eugenii
ENSCSEG00000004545	rbm47	75	84.774	ENSOPRG00000016507	-	75	84.774	Ochotona_princeps
ENSCSEG00000004545	rbm47	100	74.204	ENSODEG00000004873	RBM47	100	76.047	Octodon_degus
ENSCSEG00000004545	rbm47	100	87.049	ENSONIG00000009061	rbm47	94	90.418	Oreochromis_niloticus
ENSCSEG00000004545	rbm47	100	74.461	ENSOANG00000008978	RBM47	96	77.391	Ornithorhynchus_anatinus
ENSCSEG00000004545	rbm47	100	74.333	ENSOCUG00000012034	RBM47	100	75.251	Oryctolagus_cuniculus
ENSCSEG00000004545	rbm47	100	88.851	ENSORLG00000005847	rbm47	100	88.851	Oryzias_latipes
ENSCSEG00000004545	rbm47	100	89.020	ENSORLG00020005154	rbm47	100	89.020	Oryzias_latipes_hni
ENSCSEG00000004545	rbm47	100	89.020	ENSORLG00015000066	rbm47	100	89.189	Oryzias_latipes_hsok
ENSCSEG00000004545	rbm47	100	89.340	ENSOMEG00000010730	rbm47	100	89.340	Oryzias_melastigma
ENSCSEG00000004545	rbm47	100	73.500	ENSOGAG00000029367	-	100	74.833	Otolemur_garnettii
ENSCSEG00000004545	rbm47	100	69.463	ENSOGAG00000025193	-	100	70.805	Otolemur_garnettii
ENSCSEG00000004545	rbm47	100	66.107	ENSOARG00000012711	RBM47	100	67.726	Ovis_aries
ENSCSEG00000004545	rbm47	100	73.737	ENSPPAG00000029763	RBM47	95	83.069	Pan_paniscus
ENSCSEG00000004545	rbm47	100	79.528	ENSPPRG00000012873	RBM47	99	82.228	Panthera_pardus
ENSCSEG00000004545	rbm47	86	74.506	ENSPTIG00000017046	RBM47	100	74.308	Panthera_tigris_altaica
ENSCSEG00000004545	rbm47	100	73.737	ENSPTRG00000016006	RBM47	95	83.069	Pan_troglodytes
ENSCSEG00000004545	rbm47	100	73.737	ENSPANG00000005980	RBM47	95	83.069	Papio_anubis
ENSCSEG00000004545	rbm47	97	77.990	ENSPKIG00000005037	rbm47	95	77.123	Paramormyrops_kingsleyae
ENSCSEG00000004545	rbm47	100	74.790	ENSPKIG00000013431	RBM47	100	73.950	Paramormyrops_kingsleyae
ENSCSEG00000004545	rbm47	89	78.424	ENSPSIG00000017516	RBM47	97	77.778	Pelodiscus_sinensis
ENSCSEG00000004545	rbm47	100	89.153	ENSPMGG00000018540	rbm47	100	89.153	Periophthalmus_magnuspinnatus
ENSCSEG00000004545	rbm47	100	80.423	ENSPEMG00000011088	Rbm47	100	74.252	Peromyscus_maniculatus_bairdii
ENSCSEG00000004545	rbm47	97	88.083	ENSPFOG00000007997	rbm47	94	88.388	Poecilia_formosa
ENSCSEG00000004545	rbm47	97	88.062	ENSPLAG00000002072	rbm47	100	90.591	Poecilia_latipinna
ENSCSEG00000004545	rbm47	100	87.395	ENSPMEG00000017492	rbm47	100	87.395	Poecilia_mexicana
ENSCSEG00000004545	rbm47	97	87.889	ENSPREG00000008456	rbm47	100	90.860	Poecilia_reticulata
ENSCSEG00000004545	rbm47	99	64.983	ENSPPYG00000014688	RBM47	98	66.553	Pongo_abelii
ENSCSEG00000004545	rbm47	81	79.551	ENSPCAG00000011879	RBM47	81	81.796	Procavia_capensis
ENSCSEG00000004545	rbm47	100	78.836	ENSPCOG00000023451	RBM47	100	74.286	Propithecus_coquereli
ENSCSEG00000004545	rbm47	100	73.544	ENSPVAG00000003812	RBM47	100	74.624	Pteropus_vampyrus
ENSCSEG00000004545	rbm47	100	87.765	ENSPNYG00000022868	rbm47	95	90.172	Pundamilia_nyererei
ENSCSEG00000004545	rbm47	100	81.015	ENSPNAG00000007940	rbm47	95	83.391	Pygocentrus_nattereri
ENSCSEG00000004545	rbm47	100	73.500	ENSRNOG00000002408	Rbm47	100	74.667	Rattus_norvegicus
ENSCSEG00000004545	rbm47	100	80.526	ENSRBIG00000039601	RBM47	95	82.804	Rhinopithecus_bieti
ENSCSEG00000004545	rbm47	100	80.526	ENSRROG00000044696	RBM47	95	82.804	Rhinopithecus_roxellana
ENSCSEG00000004545	rbm47	100	72.987	ENSSBOG00000028475	RBM47	96	82.804	Saimiri_boliviensis_boliviensis
ENSCSEG00000004545	rbm47	100	76.294	ENSSHAG00000017576	RBM47	100	75.879	Sarcophilus_harrisii
ENSCSEG00000004545	rbm47	99	78.061	ENSSFOG00015024101	RBM47	96	78.163	Scleropages_formosus
ENSCSEG00000004545	rbm47	100	76.073	ENSSFOG00015012445	rbm47	94	77.700	Scleropages_formosus
ENSCSEG00000004545	rbm47	100	87.479	ENSSMAG00000009744	rbm47	93	93.503	Scophthalmus_maximus
ENSCSEG00000004545	rbm47	100	90.725	ENSSDUG00000022684	rbm47	100	88.744	Seriola_dumerili
ENSCSEG00000004545	rbm47	100	91.695	ENSSLDG00000003109	rbm47	100	90.847	Seriola_lalandi_dorsalis
ENSCSEG00000004545	rbm47	85	78.271	ENSSARG00000001735	RBM47	75	80.266	Sorex_araneus
ENSCSEG00000004545	rbm47	100	82.461	ENSSPUG00000007515	RBM47	100	75.585	Sphenodon_punctatus
ENSCSEG00000004545	rbm47	100	92.373	ENSSPAG00000001257	rbm47	100	92.373	Stegastes_partitus
ENSCSEG00000004545	rbm47	100	74.329	ENSSSCG00000008796	RBM47	100	75.418	Sus_scrofa
ENSCSEG00000004545	rbm47	100	75.874	ENSTGUG00000008705	RBM47	100	76.294	Taeniopygia_guttata
ENSCSEG00000004545	rbm47	100	88.475	ENSTRUG00000014050	rbm47	100	88.475	Takifugu_rubripes
ENSCSEG00000004545	rbm47	100	87.459	ENSTNIG00000006127	rbm47	94	90.559	Tetraodon_nigroviridis
ENSCSEG00000004545	rbm47	77	78.989	ENSTBEG00000001607	RBM47	76	80.371	Tupaia_belangeri
ENSCSEG00000004545	rbm47	100	74.411	ENSTTRG00000002839	RBM47	100	75.503	Tursiops_truncatus
ENSCSEG00000004545	rbm47	100	74.167	ENSUAMG00000021346	RBM47	100	74.833	Ursus_americanus
ENSCSEG00000004545	rbm47	56	72.603	ENSVPAG00000000641	-	56	77.931	Vicugna_pacos
ENSCSEG00000004545	rbm47	97	75.826	ENSVVUG00000014774	RBM47	100	74.624	Vulpes_vulpes
ENSCSEG00000004545	rbm47	100	76.578	ENSXETG00000012802	rbm47	100	75.500	Xenopus_tropicalis
ENSCSEG00000004545	rbm47	88	90.860	ENSXCOG00000000780	rbm47	100	90.860	Xiphophorus_couchianus
ENSCSEG00000004545	rbm47	100	87.500	ENSXMAG00000009874	rbm47	100	87.500	Xiphophorus_maculatus